Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_D03
(667 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK223248-1|BAD96968.1| 488|Homo sapiens hypothetical protein FL... 57 5e-08
BC021277-1|AAH21277.1| 488|Homo sapiens transmembrane protein 3... 56 9e-08
BC003192-1|AAH03192.1| 146|Homo sapiens TMEM39A protein protein. 56 9e-08
AK222950-1|BAD96670.1| 488|Homo sapiens hypothetical protein FL... 56 9e-08
AK001764-1|BAA91893.1| 488|Homo sapiens protein ( Homo sapiens ... 56 9e-08
CR533536-1|CAG38567.1| 492|Homo sapiens FLJ10315 protein. 46 1e-04
CR457311-1|CAG33592.1| 492|Homo sapiens FLJ10315 protein. 46 1e-04
AL445248-4|CAH71947.1| 492|Homo sapiens transmembrane protein 3... 46 1e-04
AK023331-1|BAB14530.1| 492|Homo sapiens protein ( Homo sapiens ... 46 1e-04
AL445248-3|CAH71946.1| 192|Homo sapiens transmembrane protein 3... 38 0.032
>AK223248-1|BAD96968.1| 488|Homo sapiens hypothetical protein
FLJ10902 variant protein.
Length = 488
Score = 57.2 bits (132), Expect = 5e-08
Identities = 23/51 (45%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Frame = +2
Query: 521 DGPLLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNXAMNFYLIDPH 667
DG LLFE L+F++ L A +Q++N+Y+T WW P ++ + ++NF+LID H
Sbjct: 70 DGSLLFEFLLFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYH 120
>BC021277-1|AAH21277.1| 488|Homo sapiens transmembrane protein 39A
protein.
Length = 488
Score = 56.4 bits (130), Expect = 9e-08
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +2
Query: 521 DGPLLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNXAMNFYLIDPH 667
DG LLFE L F++ L A +Q++N+Y+T WW P ++ + ++NF+LID H
Sbjct: 70 DGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYH 120
>BC003192-1|AAH03192.1| 146|Homo sapiens TMEM39A protein protein.
Length = 146
Score = 56.4 bits (130), Expect = 9e-08
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +2
Query: 521 DGPLLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNXAMNFYLIDPH 667
DG LLFE L F++ L A +Q++N+Y+T WW P ++ + ++NF+LID H
Sbjct: 70 DGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYH 120
>AK222950-1|BAD96670.1| 488|Homo sapiens hypothetical protein
FLJ10902 variant protein.
Length = 488
Score = 56.4 bits (130), Expect = 9e-08
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +2
Query: 521 DGPLLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNXAMNFYLIDPH 667
DG LLFE L F++ L A +Q++N+Y+T WW P ++ + ++NF+LID H
Sbjct: 70 DGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYH 120
>AK001764-1|BAA91893.1| 488|Homo sapiens protein ( Homo sapiens
cDNA FLJ10902 fis, clone NT2RP5003534. ).
Length = 488
Score = 56.4 bits (130), Expect = 9e-08
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +2
Query: 521 DGPLLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNXAMNFYLIDPH 667
DG LLFE L F++ L A +Q++N+Y+T WW P ++ + ++NF+LID H
Sbjct: 70 DGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYH 120
>CR533536-1|CAG38567.1| 492|Homo sapiens FLJ10315 protein.
Length = 492
Score = 46.0 bits (104), Expect = 1e-04
Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = +2
Query: 530 LLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNXAMNFYLID 661
+LFE+ +F L A + ++N+Y+T WW P S+ ++ ++NF+LID
Sbjct: 78 ILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFHLID 123
>CR457311-1|CAG33592.1| 492|Homo sapiens FLJ10315 protein.
Length = 492
Score = 46.0 bits (104), Expect = 1e-04
Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = +2
Query: 530 LLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNXAMNFYLID 661
+LFE+ +F L A + ++N+Y+T WW P S+ ++ ++NF+LID
Sbjct: 78 ILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFHLID 123
>AL445248-4|CAH71947.1| 492|Homo sapiens transmembrane protein 39B
protein.
Length = 492
Score = 46.0 bits (104), Expect = 1e-04
Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = +2
Query: 530 LLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNXAMNFYLID 661
+LFE+ +F L A + ++N+Y+T WW P S+ ++ ++NF+LID
Sbjct: 78 ILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFHLID 123
>AK023331-1|BAB14530.1| 492|Homo sapiens protein ( Homo sapiens
cDNA FLJ13269 fis, clone OVARC1000984. ).
Length = 492
Score = 46.0 bits (104), Expect = 1e-04
Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = +2
Query: 530 LLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNXAMNFYLID 661
+LFE+ +F L A + ++N+Y+T WW P S+ ++ ++NF+LID
Sbjct: 78 ILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFHLID 123
>AL445248-3|CAH71946.1| 192|Homo sapiens transmembrane protein 39B
protein.
Length = 192
Score = 37.9 bits (84), Expect = 0.032
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 530 LLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY 628
+LFE+ +F L A + ++N+Y+T WW P S+
Sbjct: 78 ILFELQLFFCQLIALFVHYINIYKTVWWYPPSH 110
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,917,209
Number of Sequences: 237096
Number of extensions: 2215136
Number of successful extensions: 8500
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8498
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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