Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D03
         (667 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003151-11|AAO61426.1|  402|Caenorhabditis elegans Hypothetical...    61   8e-10
AF003151-10|AAK18913.2|  477|Caenorhabditis elegans Hypothetical...    61   8e-10
AL023845-1|CAA19539.1|  298|Caenorhabditis elegans Hypothetical ...    33   0.18 
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr...    32   0.32 
U29097-4|AAM98031.1|  308|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U28929-1|AAN63410.1|  418|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z78417-5|CAB01686.1| 1224|Caenorhabditis elegans Hypothetical pr...    28   6.8  
L16621-7|ABA00181.1|  300|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AF125446-1|AAY86267.1|  198|Caenorhabditis elegans Hypothetical ...    28   6.8  
AF067947-4|AAC19230.1|  300|Caenorhabditis elegans Hypothetical ...    28   6.8  
AF000198-3|AAT81147.1|  125|Caenorhabditis elegans Hypothetical ...    27   9.1  
AF000198-2|AAB53055.2|  748|Caenorhabditis elegans Hypothetical ...    27   9.1  

>AF003151-11|AAO61426.1|  402|Caenorhabditis elegans Hypothetical
           protein D1007.5b protein.
          Length = 402

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +2

Query: 410 RQTRVTPNTAPTVTLADIKLAEGXXXXXXXXXXXXX-QDGPLLFEVLMFMFTLAATGLQF 586
           R+    P  AP+V  A I  A G                G L FE  +F++++ A  LQ+
Sbjct: 5   RRVPAPPPQAPSVP-ASIPRASGVTLSVHPIWPDIQFTQGELFFECTLFLYSVLALFLQY 63

Query: 587 LNLYRTTWWLPNSYTNXAMNFYLIDPH 667
           LN+Y+T WWLP SY + ++ F+LI+P+
Sbjct: 64  LNIYKTLWWLPKSYWHYSLKFHLINPY 90


>AF003151-10|AAK18913.2|  477|Caenorhabditis elegans Hypothetical
           protein D1007.5a protein.
          Length = 477

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +2

Query: 410 RQTRVTPNTAPTVTLADIKLAEGXXXXXXXXXXXXX-QDGPLLFEVLMFMFTLAATGLQF 586
           R+    P  AP+V  A I  A G                G L FE  +F++++ A  LQ+
Sbjct: 5   RRVPAPPPQAPSVP-ASIPRASGVTLSVHPIWPDIQFTQGELFFECTLFLYSVLALFLQY 63

Query: 587 LNLYRTTWWLPNSYTNXAMNFYLIDPH 667
           LN+Y+T WWLP SY + ++ F+LI+P+
Sbjct: 64  LNIYKTLWWLPKSYWHYSLKFHLINPY 90


>AL023845-1|CAA19539.1|  298|Caenorhabditis elegans Hypothetical
           protein Y51B9A.3 protein.
          Length = 298

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +2

Query: 197 ARRWANSQVSNTSSTAVSRRRKIIKDPLIKRPLPPIACKMVHPGAKKA 340
           AR+   + V+NT +  ++  R    DPL   PLPP   +    G KKA
Sbjct: 168 ARKLLYASVNNTKTVRLTLERSTNTDPLGPAPLPPDGAQSTAVGVKKA 215


>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
           protein F52B5.3 protein.
          Length = 1425

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 207 QRLAKSIVRQPTIAGKKNTTKGPLSFSVQLITHMLKLLNSFT 82
           +R+A  I+R    +G+KNTT  P+    + + H + LLN  T
Sbjct: 42  RRVANEIIRSFLKSGQKNTTLEPMGRDQRKVMHEVALLNEMT 83


>U29097-4|AAM98031.1|  308|Caenorhabditis elegans Hypothetical
           protein F18C5.4 protein.
          Length = 308

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 197 ARRWANSQVSNTSSTAVSRRRKIIKDPLIKRPLPPIACKMVHPGAKKA 340
           AR+   + V+NT +  ++  R    DPL   P PP   +    G KK+
Sbjct: 168 ARKLLYASVNNTKTVRLTLERSTTTDPLGPAPPPPDGAQSTPAGVKKS 215


>U28929-1|AAN63410.1|  418|Caenorhabditis elegans Hypothetical
           protein F09C12.2 protein.
          Length = 418

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +2

Query: 314 MVHPGAKKATGTNNKKCTYPVEDDVSGGKRVGRQTRVTPNTAPTVTLA 457
           ++H   K A    N+ C+  + D   G  R G  T+ TPNT+P   ++
Sbjct: 165 IIHRDLKPANLLLNEDCSLKIAD--FGMSRSGPSTKTTPNTSPNAHIS 210


>Z78417-5|CAB01686.1| 1224|Caenorhabditis elegans Hypothetical
           protein C35C5.6 protein.
          Length = 1224

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 322 VNHFTSDRRQRSLNERVFNNFPPS*D 245
           +++F SDRR++   ERV  NF  S D
Sbjct: 398 LSNFLSDRREKPTKERVMENFKNSID 423


>L16621-7|ABA00181.1|  300|Caenorhabditis elegans Hypothetical
           protein ZK688.10 protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = -1

Query: 388 YIILNWVCTLLIIRPCGLFRSRVNHFTSDRRQRSL---NERVFN 266
           Y+I N VC L ++  C  F  +     ++RR+R L   N R+ N
Sbjct: 204 YLIYNSVCLLAVLHLCAHFDKK--RIVAERRRRELIAQNNRIIN 245


>AF125446-1|AAY86267.1|  198|Caenorhabditis elegans Hypothetical
           protein R05C11.4 protein.
          Length = 198

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +2

Query: 224 SNTSSTAVSRRRKIIKDPLIKRPLPPIACKMVHPGAKKATGTNNKKCTYPVEDDVSGGKR 403
           SN S +A+ R    I   + + P PP  C  V P     + T+N +    +E++V+G +R
Sbjct: 135 SNESPSALYRPVDQIPPKMYEAP-PPYEC-FVPPPVVATSSTDNNEWNCILENEVNGSRR 192

Query: 404 VGRQ 415
              Q
Sbjct: 193 TPPQ 196


>AF067947-4|AAC19230.1|  300|Caenorhabditis elegans Hypothetical
           protein T10B5.7 protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 184 QTADNCW*EEHDKRATFIFRTTHHSHV 104
           +T D  + + HDK  T+ +R  HH  +
Sbjct: 199 RTGDKAFADAHDKMVTYSYRIVHHKDI 225


>AF000198-3|AAT81147.1|  125|Caenorhabditis elegans Hypothetical
           protein T28F2.4b protein.
          Length = 125

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 203 RWANSQVSNTSSTAVSRRRKIIKDPLIKRPLPPIACKMVHPG 328
           RW++ ++    S AVS  ++  K+P    P      K +H G
Sbjct: 22  RWSSIELGEAKSAAVSHYKEPSKEPKFVHPAKLEKVKRIHDG 63


>AF000198-2|AAB53055.2|  748|Caenorhabditis elegans Hypothetical
           protein T28F2.4a protein.
          Length = 748

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 203 RWANSQVSNTSSTAVSRRRKIIKDPLIKRPLPPIACKMVHPG 328
           RW++ ++    S AVS  ++  K+P    P      K +H G
Sbjct: 22  RWSSIELGEAKSAAVSHYKEPSKEPKFVHPAKLEKVKRIHDG 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,051,658
Number of Sequences: 27780
Number of extensions: 342860
Number of successful extensions: 967
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)