Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D03
         (667 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g06970.1 68418.m00789 expressed protein                             31   0.91 
At4g02900.1 68417.m00392 early-responsive to dehydration protein...    29   2.1  

>At5g06970.1 68418.m00789 expressed protein
          Length = 1101

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +2

Query: 122 CTENESGPFVVFFLPAIVGCLTILLARRWANSQVSNTSSTAVSRRRKIIKDPL 280
           C E+ SGP+    +P  V  L+  L  RW NSQ+    S      ++   DP+
Sbjct: 684 CGEDTSGPYFKKLIPYEVESLSGTLVLRWINSQLGRILSWVERAYKQEHWDPI 736


>At4g02900.1 68417.m00392 early-responsive to dehydration
           protein-related / ERD protein-related similar to ERD4
           protein (early-responsive to dehydration stress)
           [Arabidopsis thaliana] GI:15375406; contains Pfam
           profile PF02714: Domain of unknown function DUF221
          Length = 785

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -1

Query: 391 TYIILNWVCTLLIIRPCGLFRSRVNHFTSDRRQRSLNERVFNNFPPS*D 245
           TY+I  W C +L +    +   R+ H  ++ R+      +  N PP  D
Sbjct: 163 TYVITFWTCYILYMEYKAVANMRLRHLAAESRRPDQLTVLVRNVPPDPD 211


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,959,420
Number of Sequences: 28952
Number of extensions: 309352
Number of successful extensions: 738
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)