Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_D01
(703 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 80 2e-17
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 80 2e-17
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 28 0.075
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 27 0.23
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 27 0.23
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 6.5
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 21 8.6
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 8.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 8.6
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 80.2 bits (189), Expect = 2e-17
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 15/181 (8%)
Frame = +2
Query: 92 GVAGMCAKTTVAPLDRIKILLQAQ------SSHYKHHGVFGGLTAIVKQESLLALYKGNG 253
GVA +KTTVAP++R+K+LLQ Q S ++ G+ I K++ L+ ++GN
Sbjct: 18 GVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNL 77
Query: 254 AQMVRIFPYAATQFTSFEIYKK-YLSGL--HIPLVQH-GDKFXXXXXXXXXXXXXXYPLD 421
A ++R FP A F + YK+ +L G+ + +++ YPLD
Sbjct: 78 ANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLD 137
Query: 422 TIRARLAFQI---TGEHRYTGIVHAALTMFRNEGGMRALYRGFVPTMVGMVPY--AGFSF 586
R RLA + GE +TG+ + +F+ + G+ LYRGF ++ G++ Y A F F
Sbjct: 138 FARTRLAADVGKAGGEREFTGLGNCLTKIFKAD-GITGLYRGFGVSVQGIIIYRAAYFGF 196
Query: 587 Y 589
Y
Sbjct: 197 Y 197
Score = 41.5 bits (93), Expect = 7e-06
Identities = 41/157 (26%), Positives = 60/157 (38%), Gaps = 8/157 (5%)
Frame = +2
Query: 92 GVAGMCAKTTVAPLDRIKILLQAQSSHYKHHGVFGGL----TAIVKQESLLALYKGNGAQ 259
G AG + V PLD + L A F GL T I K + + LY+G G
Sbjct: 123 GAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVS 182
Query: 260 MVRIFPYAATQFTSFEIYKKYLSG-LHIPLVQHGDKFXXXXXXXXXXXXXXYPLDTIRAR 436
+ I Y A F ++ + L P + + YP DT+R R
Sbjct: 183 VQGIIIYRAAYFGFYDTARGMLPDPKKTPFLI---SWGIAQVVTTVAGIVSYPFDTVRRR 239
Query: 437 LAFQ---ITGEHRYTGIVHAALTMFRNEGGMRALYRG 538
+ Q E Y +H T+++ EGG A ++G
Sbjct: 240 MMMQSGRAKSEILYKSTLHCWATIYKTEGG-NAFFKG 275
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 80.2 bits (189), Expect = 2e-17
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 15/181 (8%)
Frame = +2
Query: 92 GVAGMCAKTTVAPLDRIKILLQAQ------SSHYKHHGVFGGLTAIVKQESLLALYKGNG 253
GVA +KTTVAP++R+K+LLQ Q S ++ G+ I K++ L+ ++GN
Sbjct: 18 GVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNL 77
Query: 254 AQMVRIFPYAATQFTSFEIYKK-YLSGL--HIPLVQH-GDKFXXXXXXXXXXXXXXYPLD 421
A ++R FP A F + YK+ +L G+ + +++ YPLD
Sbjct: 78 ANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLD 137
Query: 422 TIRARLAFQI---TGEHRYTGIVHAALTMFRNEGGMRALYRGFVPTMVGMVPY--AGFSF 586
R RLA + GE +TG+ + +F+ + G+ LYRGF ++ G++ Y A F F
Sbjct: 138 FARTRLAADVGKAGGEREFTGLGNCLTKIFKAD-GITGLYRGFGVSVQGIIIYRAAYFGF 196
Query: 587 Y 589
Y
Sbjct: 197 Y 197
Score = 41.5 bits (93), Expect = 7e-06
Identities = 41/157 (26%), Positives = 60/157 (38%), Gaps = 8/157 (5%)
Frame = +2
Query: 92 GVAGMCAKTTVAPLDRIKILLQAQSSHYKHHGVFGGL----TAIVKQESLLALYKGNGAQ 259
G AG + V PLD + L A F GL T I K + + LY+G G
Sbjct: 123 GAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVS 182
Query: 260 MVRIFPYAATQFTSFEIYKKYLSG-LHIPLVQHGDKFXXXXXXXXXXXXXXYPLDTIRAR 436
+ I Y A F ++ + L P + + YP DT+R R
Sbjct: 183 VQGIIIYRAAYFGFYDTARGMLPDPKKTPFLI---SWGIAQVVTTVAGIVSYPFDTVRRR 239
Query: 437 LAFQ---ITGEHRYTGIVHAALTMFRNEGGMRALYRG 538
+ Q E Y +H T+++ EGG A ++G
Sbjct: 240 MMMQSGRAKSEILYKSTLHCWATIYKTEGG-NAFFKG 275
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 28.3 bits (60), Expect = 0.075
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2
Query: 123 TVVFAHIPATPVGQYVAL 70
+V FAH PATP G+ VAL
Sbjct: 195 SVNFAHFPATPTGREVAL 212
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 26.6 bits (56), Expect = 0.23
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 463 QIHWYRARRSHHVSERGRYASSVPRLR-ADHGG 558
QIH YR R H ++ R SSV +R ADH G
Sbjct: 203 QIHGYRCRTMHRLT-RQVVVSSVANVRIADHRG 234
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 26.6 bits (56), Expect = 0.23
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 463 QIHWYRARRSHHVSERGRYASSVPRLR-ADHGG 558
QIH YR R H ++ R SSV +R ADH G
Sbjct: 203 QIHGYRCRTMHRLT-RQVVVSSVANVRIADHRG 234
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 499 HGESGVHDTSVSVFSRDLE 443
HGE VH S+S F + E
Sbjct: 90 HGEVNVHQRSLSSFLKTAE 108
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 519 CELCTAASCRPW 554
C LC A RPW
Sbjct: 45 CHLCGKAFSRPW 56
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -1
Query: 565 HHPHHGRHEAAVQSS 521
HH HH H A + S
Sbjct: 279 HHVHHANHHAILGHS 293
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/47 (14%), Positives = 21/47 (44%)
Frame = +1
Query: 163 VIPLQTSWCVWRFNCYSETGVFVGIIQRKWCSDGQDISICGNSIHKF 303
V+P +W V++ + + + + W +++C S+ ++
Sbjct: 118 VLPFSATWEVFKVWIFGDLWCSIWLAVDVWMCTASILNLCAISLDRY 164
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,294
Number of Sequences: 438
Number of extensions: 3863
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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