Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C24
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical pr...    85   5e-17
AF000263-3|AAL77185.1|  697|Caenorhabditis elegans Hypothetical ...    28   8.8  
AF000263-2|AAK21464.1|  755|Caenorhabditis elegans Hypothetical ...    28   8.8  
AF000263-1|AAK21462.1|  781|Caenorhabditis elegans Hypothetical ...    28   8.8  

>U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical
           protein T12A2.15a protein.
          Length = 713

 Score = 85.0 bits (201), Expect = 5e-17
 Identities = 34/97 (35%), Positives = 62/97 (63%)
 Frame = +3

Query: 498 DVKIHGMVRVVMKPLISKIPLVGGLQIFFLNNPSIDFNLVGAADILDMPGFSDILRRCIV 677
           +++  G +R ++KPL+   P+VGG+   FL  P +DFNL G  +++++PG  D +R  I 
Sbjct: 184 NIQFSGKLRAILKPLLPYPPMVGGVSGTFLEMPKMDFNLTGMGEMVELPGLIDAIRSVIN 243

Query: 678 EQVSKMMVLPNKLSIKLSDEIPTVDLRMPXPEGVLRI 788
            Q++ + VLPN++ + L+ ++    L  P P+GV+R+
Sbjct: 244 SQIAALCVLPNEIVVPLAPDVDVTQLYFPEPDGVVRL 280


>AF000263-3|AAL77185.1|  697|Caenorhabditis elegans Hypothetical
           protein T08B2.7c protein.
          Length = 697

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +3

Query: 594 PSIDFNLVGAADILDMPGFSDI-LRRCIVEQVSKMMVLPNKLSIKLSDEIPTVDL--RMP 764
           P+ID++ +  AD++    F D+ L+  +++Q+ + +V PN +    +  +P  D+     
Sbjct: 448 PTIDYSAMKNADVVIEAVFEDLQLKHKVIKQI-ESVVGPNTIIASNTSALPIKDIAAASS 506

Query: 765 XPEGVLRIH 791
            P+ V+ +H
Sbjct: 507 RPDKVIGMH 515


>AF000263-2|AAK21464.1|  755|Caenorhabditis elegans Hypothetical
           protein T08B2.7b protein.
          Length = 755

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +3

Query: 594 PSIDFNLVGAADILDMPGFSDI-LRRCIVEQVSKMMVLPNKLSIKLSDEIPTVDL--RMP 764
           P+ID++ +  AD++    F D+ L+  +++Q+ + +V PN +    +  +P  D+     
Sbjct: 422 PTIDYSAMKNADVVIEAVFEDLQLKHKVIKQI-ESVVGPNTIIASNTSALPIKDIAAASS 480

Query: 765 XPEGVLRIH 791
            P+ V+ +H
Sbjct: 481 RPDKVIGMH 489


>AF000263-1|AAK21462.1|  781|Caenorhabditis elegans Hypothetical
           protein T08B2.7a protein.
          Length = 781

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +3

Query: 594 PSIDFNLVGAADILDMPGFSDI-LRRCIVEQVSKMMVLPNKLSIKLSDEIPTVDL--RMP 764
           P+ID++ +  AD++    F D+ L+  +++Q+ + +V PN +    +  +P  D+     
Sbjct: 448 PTIDYSAMKNADVVIEAVFEDLQLKHKVIKQI-ESVVGPNTIIASNTSALPIKDIAAASS 506

Query: 765 XPEGVLRIH 791
            P+ V+ +H
Sbjct: 507 RPDKVIGMH 515


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,760,031
Number of Sequences: 27780
Number of extensions: 375098
Number of successful extensions: 952
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)