Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_C23
(604 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal prot... 273 1e-73
AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p pro... 273 1e-73
AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA... 273 1e-73
BT023059-1|AAY55475.1| 328|Drosophila melanogaster IP10969p pro... 35 0.074
AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p pro... 29 4.9
AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-P... 29 4.9
AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-P... 29 4.9
>X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal protein
L18a protein.
Length = 177
Score = 273 bits (669), Expect = 1e-73
Identities = 127/176 (72%), Positives = 142/176 (80%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 203
M+AKG L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 204 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 383
IV NFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 384 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 551
AHSIQIIKV+ I AA RR VKQFH+S I+FPL +RVHH F++++P TYF
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p
protein.
Length = 177
Score = 273 bits (669), Expect = 1e-73
Identities = 127/176 (72%), Positives = 142/176 (80%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 203
M+AKG L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 204 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 383
IV NFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 384 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 551
AHSIQIIKV+ I AA RR VKQFH+S I+FPL +RVHH F++++P TYF
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA
protein.
Length = 177
Score = 273 bits (669), Expect = 1e-73
Identities = 127/176 (72%), Positives = 142/176 (80%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 203
M+AKG L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 204 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 383
IV NFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 384 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 551
AHSIQIIKV+ I AA RR VKQFH+S I+FPL +RVHH F++++P TYF
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>BT023059-1|AAY55475.1| 328|Drosophila melanogaster IP10969p
protein.
Length = 328
Score = 35.1 bits (77), Expect = 0.074
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLP 77
M+AKG L+EYEV+GRKLP
Sbjct: 1 MRAKGLLKEYEVVGRKLP 18
>AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p
protein.
Length = 1124
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 349 ATEIWELDTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSH 483
A W + + L+Q R + WK S LL + + S S SH
Sbjct: 45 AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 89
>AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-PB,
isoform B protein.
Length = 1087
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 349 ATEIWELDTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSH 483
A W + + L+Q R + WK S LL + + S S SH
Sbjct: 8 AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 52
>AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-PA,
isoform A protein.
Length = 1124
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 349 ATEIWELDTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSH 483
A W + + L+Q R + WK S LL + + S S SH
Sbjct: 45 AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 89
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,341,022
Number of Sequences: 53049
Number of extensions: 617923
Number of successful extensions: 2050
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2050
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -