Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_C22
(741 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 70 2e-12
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 59 4e-09
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 58 1e-08
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 55 5e-08
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 54 9e-08
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 45 1e-06
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 50 3e-06
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 48 6e-06
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 48 1e-05
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 46 3e-05
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 45 6e-05
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 45 7e-05
SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 40 0.002
SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05) 39 0.004
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 38 0.009
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 38 0.011
SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1) 36 0.046
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.080
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_15626| Best HMM Match : adh_short (HMM E-Value=3.8e-05) 31 0.74
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 31 0.98
SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 31 1.3
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 31 1.3
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 30 1.7
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 30 2.3
SB_2745| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05) 29 3.0
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 29 3.0
SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021) 29 3.0
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_56681| Best HMM Match : adh_short (HMM E-Value=0.035) 29 4.0
SB_34657| Best HMM Match : TMEM9 (HMM E-Value=2.9) 29 5.2
SB_5021| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_50745| Best HMM Match : CBM_10 (HMM E-Value=6.9) 28 9.1
SB_11981| Best HMM Match : CH (HMM E-Value=0.00075) 28 9.1
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 70.1 bits (164), Expect = 2e-12
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Frame = +1
Query: 268 LSKLGAQLSLTGRNVENLQKVSKDC---DKFAST--------LSITADLTKESDIEKIIK 414
L+K G +L L+ R L++V + C K A+T L + D+T+ ++++
Sbjct: 62 LAKFGCKLVLSARRRSELERVKEQCIAIAKEANTSYNADQDILVLPMDVTEYDKHTELVR 121
Query: 415 KTIDHYGKLDVLVNNAGIIETG-TIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESK- 588
+DH+ K+D+L+NN+G + G +E + +++ N ++ LT +PH++E K
Sbjct: 122 SVLDHFNKIDILINNSGRSQRGLAVETPGIEVEKAMLDLNFLAVVSLTKAVLPHMIERKN 181
Query: 589 GXXXXXXXXXGIRSFPGVLAYNISKASVDQFTRCVALXLAPKGVRVTV 732
G G P +YN +K +V + + + L PK + VT+
Sbjct: 182 GHIVVTSSVAGKIGAPMSTSYNATKFAVQGYFDGLRVELFPKNIHVTL 229
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 67.3 bits (157), Expect = 1e-11
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
Frame = +1
Query: 211 KVVXXXXXXXXXXXXXXXFLSKLGAQLSLTGRNVENLQKVSKDCDKFASTLSITADLTKE 390
KVV ++ GA++ T N E L+++ S I +
Sbjct: 17 KVVVLSAAAQGIGKATALACAREGAKVIATDINAEKLKELH-------SVPGIETRVVDV 69
Query: 391 SDIEKIIKKTIDHYGKLDVLVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVP 570
+D E I KK ++DVL N AG++ G IE S Q+D M+ NV+S++ +T +P
Sbjct: 70 TDYEAI-KKFASEVDRVDVLFNCAGLVLGGNIEECSEKQWDLTMDLNVKSMFRMTKECIP 128
Query: 571 HLLE--SKGXXXXXXXXXGIRSFPGVLAYNISKASVDQFTRCVALXLAPKGVRV 726
+ + S I+ P AY SKA+V FT+ +A KG+RV
Sbjct: 129 KMRQQGSGSIINMASVASSIKGAPNRFAYGTSKAAVIGFTKAIAADYITKGIRV 182
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 58.8 bits (136), Expect = 4e-09
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Frame = +1
Query: 361 LSITADLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIETG-TIENTSLAQYDRLMNTNVR 537
+++ AD+ E + ++ + H+G+LDVLVNNAGI+ET +E LA++ R+ TNV
Sbjct: 60 IAVQADVADERQVMQLFARLDQHFGRLDVLVNNAGILETQMRLEQMELARWQRVFATNVF 119
Query: 538 SIYYLTMLAVPHLLESK----GXXXXXXXXXGIRSFPG-VLAYNISKASVDQFTRCVALX 702
+ A+ + + G PG + Y K ++D T +A
Sbjct: 120 GSFLCCREAIKRMSTRQGGNGGAIVNLSSAAARLGAPGEYIDYAAVKGAIDSMTLGLAKE 179
Query: 703 LAPKGVRV 726
+A G+RV
Sbjct: 180 VAADGIRV 187
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 57.6 bits (133), Expect = 1e-08
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Frame = +1
Query: 313 ENLQKVSKDCDKFAS--TLSITADLTK--ESDIEKIIKKTIDHYGKLDVLVNNAGII--- 471
E+ +K+ ++ + S + + ADL+ + K+I+ T+ +G+LD+LVNNA
Sbjct: 48 EDAEKIVQEMNSVRSDSAIMLKADLSTNIQETARKLIEDTVTAFGQLDLLVNNASQFCPT 107
Query: 472 ETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXXGIRSFPGVLAY 651
E+G+++ + +++LM N+ ++L+ A PHL S G R Y
Sbjct: 108 ESGSVQEET---WNKLMGVNLSFPFFLSQAAFPHLKRSHGSIINMIDIHAERPLANHSVY 164
Query: 652 NISKASVDQFTRCVALXLAPKGVRV 726
+SKA + T+ +A AP VRV
Sbjct: 165 CVSKAGLHMCTQALAKDFAP-DVRV 188
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 55.2 bits (127), Expect = 5e-08
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Frame = +1
Query: 298 TGRNVENLQKVSKDCDK-FASTLSITA-DLTKESDIEKIIKKTIDHYGKLDVLVNNAGII 471
T RN++ + C TL I D++ + +E+ + + G++D+LVNNAGI
Sbjct: 36 TMRNLDKKGSLESACQNALGDTLFIRELDVSSDDSVEEALNAIYEEEGRIDILVNNAGIS 95
Query: 472 ETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHL-LESKGXXXXXXXXXGIRSFPGVLA 648
G +E + + NTN + ++ +P + + G G P
Sbjct: 96 HIGMLETQTQSLVKETFNTNFFGVLRMSKAVIPRMKSDHSGHIINISSTAGHTGMPFTGL 155
Query: 649 YNISKASVDQFTRCVALXLAPKGVRVTVS 735
Y SK +V+ + +A L GV+ +S
Sbjct: 156 YCASKFAVEGLSESLAPLLRKFGVKFALS 184
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 54.4 bits (125), Expect = 9e-08
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 2/179 (1%)
Frame = +1
Query: 133 LFYSQQEVFNTVSH*KYSEVTMNFAGKVVXXXXXXXXXXXXXXXFLSKLGAQLSLTGRNV 312
LF +VF ++ + + G+ V L+K G +L L N+
Sbjct: 11 LFVVVYQVFQALAQFVFPR-RKSLRGETVLITGAASGIGRLTALILAKKGCKLVLWDINL 69
Query: 313 ENLQKVSKDC-DKFASTLSITADLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIETGTIE 489
E L+ V+++ D A T D+ K+ ++EK+ D G + +L+NNAG++
Sbjct: 70 EALKAVAQEIQDLGAETHYFECDVRKKDEVEKVANAVEDQAGNVTILINNAGVVTGKKFL 129
Query: 490 NTSLAQYDRLMNTNVRSIYYLTMLAVPHLLE-SKGXXXXXXXXXGIRSFPGVLAYNISK 663
N S + R N + + +P ++E ++G G G + Y SK
Sbjct: 130 NCSESDVMRTFQVNSLAHIWTIQRFIPSMMEKNRGHIVSIASVAGYFGLVGCVDYCASK 188
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 44.8 bits (101), Expect(2) = 1e-06
Identities = 22/112 (19%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 208 GKVVXXXXXXXXXXXXXXXFLSKLGAQLSLTGRNVENLQKVSKDCDKFAST-LSITADLT 384
G+V L++ G +++L R E L ++ + +S+ D+T
Sbjct: 104 GQVAIVTGASSGIGAAVAKALAEAGVKVALAARREERLTQLRDEIIANGDVAISVKTDVT 163
Query: 385 KESDIEKIIKKTIDHYGKLDVLVNNAGIIETGTIENTSLAQYDRLMNTNVRS 540
+ +E ++K+T G +D+LV+ AG++ ++N ++ ++++++ N ++
Sbjct: 164 IKEQMESLVKRTDSTLGPVDILVSCAGVMYYQMMKNCAMKDWEQMVDINCKA 215
Score = 25.4 bits (53), Expect(2) = 1e-06
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 625 RSFPGVLAYNISKASVDQFTRCVALXLAPKGVRVT 729
++FPG+ Y+ +K V+ ++ + +A GV+VT
Sbjct: 214 KAFPGLAIYSGTKFFVEALSQGLRQEIAGSGVKVT 248
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/95 (30%), Positives = 47/95 (49%)
Frame = +1
Query: 448 LVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXXGIR 627
+VNNAGI G + ++ Q R+ + NV + +T +P L +S G G
Sbjct: 628 IVNNAGIGSGGPFDWITVQQMQRVFDVNVWGLLNVTKAFLPLLKKSCGRIVNVASCAGKL 687
Query: 628 SFPGVLAYNISKASVDQFTRCVALXLAPKGVRVTV 732
PG+ AY+ SK +V F+ + + + P GV V +
Sbjct: 688 PGPGLSAYSASKYAVQSFSDALRIEMRPFGVSVHI 722
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = +1
Query: 376 DLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLT 555
D+ + ++ ++ + ++ G++DVLVNNAGI E + +++ NV + +T
Sbjct: 95 DVCSDESVKAVVAEIVEKEGRIDVLVNNAGIGLFCVPECATTDAINKVFEPNVYGLMRMT 154
Query: 556 MLAVPHLLESK-GXXXXXXXXXGIRSFPGVLAYNISKASVDQFTRCVALXLAPKGVRVTV 732
+PH+ + + G GI P Y SK +V+ + +A L ++ T+
Sbjct: 155 NAVIPHMKKQRAGHVVNIGSVLGIVGTPFSEIYCASKFAVEGYAEAMAPVLGKFNIKTTI 214
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/93 (27%), Positives = 46/93 (49%)
Frame = +1
Query: 454 NNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXXGIRSF 633
NNAG + +E L Y R+ + N+ + +T +P + ++G GI
Sbjct: 26 NNAGFMTLAPLEWFPLDDYKRMADVNLWGLVDVTKTFLPLVKMARGRVVNVSSIAGIVVV 85
Query: 634 PGVLAYNISKASVDQFTRCVALXLAPKGVRVTV 732
P + AY+I+K V+ F+ + ++P GVRV +
Sbjct: 86 PSMAAYSITKYGVEAFSDALRREMSPWGVRVII 118
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +1
Query: 373 ADLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYL 552
AD +++++ I +G++DV+VNNAGI+ +I S +D + +++ + +
Sbjct: 72 ADYNSVEQGDQVVETAIKAFGRIDVVVNNAGILRDKSILRMSELDWDLVQRVHLKGSFLV 131
Query: 553 TMLAVPHLLESK-GXXXXXXXXXGIRSFPGVLAYNISK 663
T A PH+ + K G GI G Y+ +K
Sbjct: 132 TRAAWPHMKKQKFGRIIMTTSTSGIYGNFGQANYSAAK 169
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 47.6 bits (108), Expect = 1e-05
Identities = 42/198 (21%), Positives = 75/198 (37%), Gaps = 23/198 (11%)
Frame = +1
Query: 202 FAGKVVXXXXXXXXXXXXXXXFLSKLGAQLSLTGRNVENLQKVSKDCDKF------ASTL 363
F GKV L LG+++ + R+ LQK + D +KF A
Sbjct: 14 FDGKVAIVTGGGTGIGKAIAAELLSLGSKVVIASRSEGKLQKAAVDLEKFIPPSSSAEVK 73
Query: 364 SITADLTKESDIEKII-----------------KKTIDHYGKLDVLVNNAGIIETGTIEN 492
I ++ KES + ++ K T+ YG++D LVNN G + N
Sbjct: 74 VIPCNIRKESQVTNLMESSMSSYYFSLKVTNLMKSTLSSYGRIDYLVNNGGGQFLCPVSN 133
Query: 493 TSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXXGIRSFPGVLAYNISKASV 672
S ++ +++TN+ + A + G + +P + ++A V
Sbjct: 134 MSYKGWNAVIDTNLNGTFLCCTEAYRLWMSEHGGSIVNIIVDFFKGYPNMAHTGAARAGV 193
Query: 673 DQFTRCVALXLAPKGVRV 726
T +A+ G+R+
Sbjct: 194 HNLTMSLAVEWISNGIRI 211
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 376 DLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLT 555
D+T + + ++++ ++DVLVNNAG+ G +E +++ + N N + LT
Sbjct: 257 DVTSDESVTEVLQSIYSAERRIDVLVNNAGVGLIGVLETHTMSLVREMFNVNFFGVVRLT 316
Query: 556 MLAVPHLL-ESKGXXXXXXXXXGIRSFPGVLAYNISKASVDQFTRCVA 696
+P + G GIR P Y SK +V+ +A
Sbjct: 317 KAVIPKMKGNPSGHIINIPSIGGIRGVPFNAIYCSSKFAVEGMAESLA 364
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/171 (18%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Frame = +1
Query: 208 GKVVXXXXXXXXXXXXXXXFLSKLGAQLSLTGRNVENLQKVS-KDCDKFASTLSITADLT 384
GK+V + S G + GR+ + +++ K C K D+T
Sbjct: 2 GKIVAITGVSTGLGLALTKWFSSQGHTVVGCGRSAAKIAEMNEKYCGKGKPNQFYVVDIT 61
Query: 385 KESDIEKIIKKTIDHYGKLDVLVNNAGII-ETGTIENTSLAQYDRLMNTNVRSIYYLTML 561
+S +++ +G D ++NNAG + + + + ++D++++ N++ +
Sbjct: 62 DDSVVKEWATNVCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVNLKGSANVIRS 121
Query: 562 AVPHLLES-KGXXXXXXXXXGIRSFPGVLAYNISKASVDQFTRCVALXLAP 711
+P ++++ KG G + Y +K ++ TR +A+ L P
Sbjct: 122 FLPKMIKAGKGVIVNFSSGYGKAGKAKMAPYCATKWGIEGLTRALAMELPP 172
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 45.2 bits (102), Expect = 6e-05
Identities = 27/95 (28%), Positives = 43/95 (45%)
Frame = +1
Query: 448 LVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXXGIR 627
LVNNAG+ G +E ++ +Y ++ N+ +T +P L KG G+
Sbjct: 41 LVNNAGVFIPGPVEWMTVEEYKQIAEVNLWGTVRMTKAFLPLLKREKGRVVNISSVAGMV 100
Query: 628 SFPGVLAYNISKASVDQFTRCVALXLAPKGVRVTV 732
AY ISK V F+ + ++P GV V +
Sbjct: 101 PLQRSSAYCISKFGVSVFSDALRREMSPWGVGVVL 135
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +1
Query: 313 ENLQKVSKDCDKFASTLSITADLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIETGTIEN 492
E L+ +S++ K L I D+T + +E ++T D +G+LD+L NNAGI EN
Sbjct: 44 ETLKLLSENYSKHR-VLFIKCDVTSQPQMEAAFQRTKDVFGRLDILCNNAGI---AVREN 99
Query: 493 TSL--AQYDRLMNTNVRSIYYLTMLAVPHL 576
L + +++ NV+ + T+L + H+
Sbjct: 100 DLLRSGAWKTIIDINVKGVILGTLLGLDHM 129
>SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/95 (23%), Positives = 46/95 (48%)
Frame = +1
Query: 448 LVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXXGIR 627
+VNNAGI G ++ + ++ + + N+ + +T +P + ++G G
Sbjct: 20 VVNNAGIAGVGPVDWIPVERFKHVADINLWGLVDVTKTFLPLVKRARGRIVNVTSIAGRF 79
Query: 628 SFPGVLAYNISKASVDQFTRCVALXLAPKGVRVTV 732
+ P Y++SK + F+ + LAP G+ V++
Sbjct: 80 TLPFASPYSVSKYGAEAFSDAIRRELAPFGISVSI 114
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Frame = +1
Query: 328 VSKDCDKFASTLSITADLTKESDIEKI---IKKTIDHYGKLDVLVNNAGIIETGTIENTS 498
+ + C K T+ + D+T I + +K+ + L + NNAG + +E
Sbjct: 426 LEQTCSK--RTVGLLMDVTSHEQIIEAFEQVKRVLPSGTGLWAVYNNAGYMTLAPLEWFP 483
Query: 499 LAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXXGIRSFPGVLAYNISKASVDQ 678
L Y R+ + N+ + ++ +P + ++G G+ + Y+I+K V+
Sbjct: 484 LDDYKRMADVNLWGLVDVSKTFLPLVKMARGRVVNVASTVGLIANELTAPYSITKYGVEA 543
Query: 679 FTRCVALXLAPKGVRVTV 732
F+ + + P GVRV++
Sbjct: 544 FSDVLRREMFPWGVRVSI 561
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/78 (23%), Positives = 37/78 (47%)
Frame = +1
Query: 499 LAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXXGIRSFPGVLAYNISKASVDQ 678
L Y R+ + N+ + +T +P + ++G G+ + Y+I+K V+
Sbjct: 11 LDDYKRMADVNLWGLVDVTKTFLPLVKMARGRVVNVSSIVGLIANELTAPYSITKYGVEA 70
Query: 679 FTRCVALXLAPKGVRVTV 732
F+ + + P GVRV++
Sbjct: 71 FSDVLRREMLPWGVRVSI 88
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/78 (23%), Positives = 37/78 (47%)
Frame = +1
Query: 499 LAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXXGIRSFPGVLAYNISKASVDQ 678
L Y R+ + N+ + +T +P + ++G G+ + Y+I+K V+
Sbjct: 177 LDDYKRMADVNLWGLVDVTKTFLPLVKMARGRVVNVASIVGLIAGELTAPYSITKYGVEA 236
Query: 679 FTRCVALXLAPKGVRVTV 732
F+ + + P GVRV++
Sbjct: 237 FSDVLRREMLPWGVRVSI 254
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Frame = +1
Query: 379 LTKESDIEKIIKKTIDHYGKLDVLVNNAGI-IETGTIENT----SLAQYDRLMNTNVRSI 543
+T E+D+ + I + +G L+ VN AGI I T+ T +L +++++ N
Sbjct: 72 VTSEADVRQAIAVANEKFGPLNAAVNCAGIGIAVKTLSKTGEAHALDLFEKVLKVNTTGS 131
Query: 544 YYLTMLAVPHLLESK----GXXXXXXXXXGIRSFPGVL---AYNISKASVDQFTRCVALX 702
+ + L +++++ G + +F G + AY+ SK + T +A
Sbjct: 132 FNVIRLVAEQMIKNEPTEGGERGVITNTASVAAFDGQMGQAAYSASKGGIVGMTLPIARD 191
Query: 703 LAPKGVRV 726
LA G+RV
Sbjct: 192 LARNGIRV 199
>SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05)
Length = 233
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Frame = +1
Query: 268 LSKLGAQLSLTGRNVENLQKVSKDCDKFAST--LSITADLTKESDIEKIIKKTIDHYGKL 441
L KLG + T R + + DC + T + ++ ++ S ++I++ L
Sbjct: 61 LDKLGFHVLATCRTRKGEDSLRLDCSERMRTYVMDVSDTVSVRSVYQQILQLLESEQQGL 120
Query: 442 DVLVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKG 591
LVNNAGI++ G ++ SL + + N+ + +T +P L ++KG
Sbjct: 121 WGLVNNAGILQVGPLDWQSLDSIKQTADVNLWGLIDVTKTFLPLLKKAKG 170
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Frame = +1
Query: 376 DLTKESDIEKI---IKKTIDHYGKLDVLVNNAGIIETGTIENTSLAQYDRLMNTNVRSIY 546
D+TK IE +K + L L NNAG + G +E ++ Y + N+ +
Sbjct: 87 DVTKHEQIEAAYAKVKSCLPPDTGLWALDNNAGYMGLGPLEWFTMDDYKMQADINLWGLI 146
Query: 547 YLTMLAVPHLLESKGXXXXXXXXXGIRSFPGVLAYNISKASVDQFTRCVALXLAP 711
+T +P + +KG G+ + AY+++K V+ F+ + +AP
Sbjct: 147 DVTKTFLPLIKVAKGRVVNFSSIAGVATPALRAAYSVTKYGVESFSDALRREMAP 201
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +1
Query: 409 IKKTIDHYGKLDVLVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLE-- 582
++K I G++DVLVNNAG + + + ++ ++ +V + + +A +++
Sbjct: 107 LEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQG 166
Query: 583 SKGXXXXXXXXXGIRSFPGVLAYNISKASVDQFTRCVALXL 705
G P AY +K ++ T+ +AL L
Sbjct: 167 QGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALEL 207
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 37.5 bits (83), Expect = 0.011
Identities = 26/76 (34%), Positives = 39/76 (51%)
Frame = +1
Query: 364 SITADLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIETGTIENTSLAQYDRLMNTNVRSI 543
SI A +DIEK+ +K I+ D+LVNNAG + +DR+ TNVR+
Sbjct: 3 SIQAVCDDVADIEKM-QKLIESQETFDLLVNNAGFAIFESFLEIKPESFDRMHETNVRAP 61
Query: 544 YYLTMLAVPHLLESKG 591
++ AV + +KG
Sbjct: 62 LFIAQ-AVAKKMVAKG 76
>SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1)
Length = 256
Score = 35.5 bits (78), Expect = 0.046
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 367 ITADLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIE 474
I D+ + + I++T+ + KLD+L NNAGII+
Sbjct: 95 IECDVCNREKLSEAIRQTVKDHSKLDILCNNAGIID 130
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 34.7 bits (76), Expect = 0.080
Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Frame = +1
Query: 193 TMNFAGKVVXXXXXXXXXXXXXXXFLSKLGAQLSLTGRNVENLQKVSKDCDKFASTLSIT 372
T+ GK V L++ GA++ + R++E+ +K + + +
Sbjct: 63 TVRLHGKTVIVTGANSGIGKATALELARRGARVIMACRDLESAEKAASEIRYKVPKAEVV 122
Query: 373 A---DLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIE 474
DL + K + + +LD+LVNNAG+ +
Sbjct: 123 CRFLDLNSLISVRKFAEDVMREEKRLDILVNNAGVYQ 159
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 376 DLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIETGTIENTSLAQYDRLMNTN 531
D+T I ++ + YG LD+LVNNAGI++ + + + + + TN
Sbjct: 80 DVTSNDSIHELTLHVQEKYGGLDILVNNAGILKKESSGTSYARKAEDCVKTN 131
>SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +1
Query: 367 ITADLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIE 474
I+ D++ + ++ +T+ +G LD++ NNAGI++
Sbjct: 53 ISCDVSNQDQLKDAFWETVSTHGHLDIVFNNAGILD 88
>SB_15626| Best HMM Match : adh_short (HMM E-Value=3.8e-05)
Length = 426
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 448 LVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKG 591
LVNNAG ++ G IE L+ Y + + N+ + +T +P + ++ G
Sbjct: 136 LVNNAGTLDVGPIEWLPLSSYKHVADVNLWGMIDVTKAFLPLVQQAHG 183
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 31.1 bits (67), Expect = 0.98
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +1
Query: 208 GKVVXXXXXXXXXXXXXXXFLSKLGAQLSLTGRNVENLQKVSKDCDKFASTLSITA---D 378
GK V L+K GA++ + RN++ +D + + + D
Sbjct: 37 GKTVIITGATTGIGKETAVDLAKRGARVIIGARNLDRGNAAVRDIQASSGSQQVFVEHLD 96
Query: 379 LTKESDIEKIIKKTIDHYGKLDVLVNNAGI 468
L S + K + ++D+L+NNAG+
Sbjct: 97 LASLSSVRKFAEVINKKEERVDILMNNAGV 126
>SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 31.1 bits (67), Expect = 0.98
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 619 GIRSFPGVLAYNISKASVDQFTRCVALXLAPKGVRVTV 732
G S P + Y ISK +V+ F+ + L L P GV+V V
Sbjct: 35 GYISVPSIGVYCISKFAVEAFSSALRLELEPWGVKVIV 72
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = +1
Query: 271 SKLGAQLSLTGRNVE-NLQKVSKDCDKFASTLSITADLTKESDIEKIIKKTIDHYGKLDV 447
+K+GA++ N + N Q V D + DI ++ G++ +
Sbjct: 74 AKIGAKIVCVDINKQANDQTVEVIKSLNQKAFGYKCDCSSREDIYRVADIVKREVGEVTI 133
Query: 448 LVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLTML 561
LVNNAGI+ +T + M N + +++ L
Sbjct: 134 LVNNAGIVSGKKFLDTEDWMIQKTMEVNTMAHFWILAL 171
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 433 GKLDVLVNNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLE-SKGXXXXXX 609
G +D+LVNNAGI+ + + + AQ + + N+ + ++ + + +LE ++G
Sbjct: 1298 GDVDILVNNAGILHGKRLLDQTDAQIQKAIELNLLAHFWTSRSFLGRMLEQNQGHIVTIS 1357
Query: 610 XXXGIRSFP 636
G SFP
Sbjct: 1358 SVSG--SFP 1364
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +1
Query: 208 GKVVXXXXXXXXXXXXXXXFLSKLGAQLSLTGRNVENLQKVSKDCDKFASTLSITA---D 378
GK V L+K GA++ + RN++ +D + + + D
Sbjct: 37 GKTVIITGATTGIGKETAVDLAKRGARVIIGARNLDRGNTAVRDIQSRSGSQQVFVEHLD 96
Query: 379 LTKESDIEKIIKKTIDHYGKLDVLVNNAGI 468
L S + K + + ++ +L+NNAG+
Sbjct: 97 LASLSSVRKFAEVMNNKEERIHILINNAGV 126
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 29.9 bits (64), Expect = 2.3
Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 13/136 (9%)
Frame = +1
Query: 367 ITADLTKESDIEKIIKKTIDHYGKLDVLVNNAGI-IETGTIENTS----LAQYDRLMNTN 531
I + ES+I+ IK + YG ++ +N A + + T+ + L ++ M N
Sbjct: 339 IPGHVDSESEIKAAIKVAKEKYGCVNASINTAALNTKELTLSESGCPHPLELFEETMKIN 398
Query: 532 VRSIYYLTMLAVPHLLES-------KGXXXXXXXXXGIRSFPGVLAYNISKASVDQFTRC 690
+ + L + + +G G G +AY +K +++ T
Sbjct: 399 AVGTFNVARLVAESMATNTPDQEGERGVIVNVSSIHGTEGQSGKVAYAATKGAINAMTLP 458
Query: 691 VALXLAPKGVRV-TVS 735
+A LA G+RV T+S
Sbjct: 459 MARDLAKLGIRVNTIS 474
>SB_2745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +1
Query: 298 TGRNVENLQKVSKDCDKFASTLSITADLTKESDIEKIIKKTI--DHYGKLDVLVNNAGII 471
TGR V + V DC L + DL +D + + DH D LVN ++
Sbjct: 141 TGRLVNTDRLVKNDCLVNTGRL-VNTDLLVNTDRLVNTDRLVNTDHLVNTDHLVNTDCLV 199
Query: 472 ETGTIENTSLAQYDRLMNTN 531
TG + NT DRL+NT+
Sbjct: 200 TTGCLVNT-----DRLVNTD 214
>SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05)
Length = 493
Score = 29.5 bits (63), Expect = 3.0
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = +1
Query: 268 LSKLGAQLSLTGRNVENLQKVSKDCDKFASTLSI---TADLTKESDIEKIIKKTIDHYGK 438
L+K GA + + R+ + ++ ++ + + +I D+++ S++ K +
Sbjct: 63 LAKSGATVHMVCRDEQRGEQARQELLQESGNQNIYLHVLDMSQPSNVCKFARDFAASNRP 122
Query: 439 LDVLVNNAG-IIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHL 576
L VLVNNAG ++ T TI L + TN Y LT +P L
Sbjct: 123 LHVLVNNAGCMVNTRTITEDGL---EMNFATNTLGTYILTKELLPCL 166
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/131 (16%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Frame = +1
Query: 325 KVSKDCDKFASTLS----ITADLTKESDIEKIIKKTIDHYGKLDVLVNNAGII-ETGTIE 489
K+ K ++FAS D++ + +++ ++ + +G +L+NN+G+ +
Sbjct: 43 KIEKINEEFASGKEKRQFYVVDISNDEAVKQWSQQVMLDFGAPSLLINNSGVTNKNANFW 102
Query: 490 NTSLAQYDRLMNTNVRSIYYLTMLAVPHLLES--KGXXXXXXXXXGIRSFPGVLAYNISK 663
+++++++ N++ + +P ++E+ KG G P V Y +K
Sbjct: 103 EVPTEEFNKVVDINIKGTANVLRHFLPSMIEAKRKGVIVNFTSGWGRCVAPEVAPYCTTK 162
Query: 664 ASVDQFTRCVA 696
+++ ++ +A
Sbjct: 163 WALEGLSKALA 173
>SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021)
Length = 181
Score = 29.5 bits (63), Expect = 3.0
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = +1
Query: 268 LSKLGAQLSLTGRNVENLQKVSKDCDKFASTLSI---TADLTKESDIEKIIKKTIDHYGK 438
L+K GA + + R+ + ++ ++ + + +I D+++ S++ K +
Sbjct: 63 LAKSGATVHMVCRDEQRGEQARQELLQESGNQNIYLHVLDMSQPSNVCKFARDFAASNRP 122
Query: 439 LDVLVNNAG-IIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHL 576
L VLVNNAG ++ T TI L + TN Y LT +P L
Sbjct: 123 LHVLVNNAGCMVNTRTITEDGL---EMNFATNTLGTYILTKELLPCL 166
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 283 AQLSLTGRNVENLQKVSKDCDKFASTLSITA---DLTKESDIEKIIKKTIDHYGKLDVLV 453
A++ + R+V K + + + A + + DL + I + K+ + ++DVL+
Sbjct: 97 ARVIMACRDVHKGMKAAAEIVQSAGNMDVEVKKLDLASFASIREFAKEVNEEESRVDVLI 156
Query: 454 NNAGII 471
NNAG +
Sbjct: 157 NNAGYL 162
>SB_56681| Best HMM Match : adh_short (HMM E-Value=0.035)
Length = 437
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 367 ITADLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIET 477
I DL+ S + + +K +L+VLVNNAG++ T
Sbjct: 30 IHLDLSDLSSVREFVKSFHQSENQLNVLVNNAGVMLT 66
>SB_34657| Best HMM Match : TMEM9 (HMM E-Value=2.9)
Length = 404
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 636 RERANPINTRYVYNIPFAFEEMRDRQHR 553
R + I T YV++IP +EEM D+ +R
Sbjct: 208 RSSSTIIATLYVFSIPTLYEEMLDKSYR 235
>SB_5021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 28.3 bits (60), Expect = 6.9
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 358 TLSITADLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIETGTIENTSLAQYDRLMNTNVR 537
T ++ +TK + I K K +DHY V + I++TG I+ T L+ D M +R
Sbjct: 321 TYQLSQLITKPTRITKSSKSLLDHY----VTNSPEKIVKTGVIQ-TGLS--DHGMIFGIR 373
Query: 538 SIYYLTML-AVPHLLE 582
I Y T L + P ++E
Sbjct: 374 KINYKTPLNSKPKIIE 389
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +1
Query: 313 ENLQKVSKDCDKF--ASTLSITADLTKESDIEKIIKKTIDHYGKLDVLVNNAGIIETGTI 486
E+++ +DC+K A+ +T + + + IE+ I+ I+ YGKLD ++ T+
Sbjct: 3785 EDVKNHEQDCEKLKGAAQRVVTICIEEVTVIEEEIQIIIERYGKLDKQ------LQDKTV 3838
Query: 487 ENTSLAQYDRLMNTN 531
SL D+LMN N
Sbjct: 3839 RAESL--QDQLMNFN 3851
>SB_50745| Best HMM Match : CBM_10 (HMM E-Value=6.9)
Length = 340
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 624 SLFPWSSGIQHLQSIC*PIHSLCCFXI-GTERS 719
SLF + GI+ L +C SLCC I G E+S
Sbjct: 189 SLFSFPMGIEALSYLCALTSSLCCVDIPGDEKS 221
>SB_11981| Best HMM Match : CH (HMM E-Value=0.00075)
Length = 823
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 461 PVLLKLEPSRTPPWPSMIV 517
PV++K P RTPPW ++
Sbjct: 241 PVVIKPSPRRTPPWQEQLL 259
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,521,770
Number of Sequences: 59808
Number of extensions: 425847
Number of successful extensions: 896
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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