Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_C21
(761 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC091496-1|AAH91496.1| 620|Homo sapiens FBXO21 protein protein. 35 0.28
AF174601-1|AAF04522.1| 621|Homo sapiens F-box protein Fbx21 pro... 35 0.28
AB020682-1|BAA74898.1| 621|Homo sapiens KIAA0875 protein protein. 35 0.28
DQ904332-1|ABI98402.1| 155|Homo sapiens F-box only protein 48 p... 33 1.5
BC089423-1|AAH89423.1| 155|Homo sapiens hypothetical protein LO... 33 1.5
Z36714-1|CAA85308.1| 786|Homo sapiens cyclin F protein. 31 3.4
U17105-1|AAB60342.1| 786|Homo sapiens cyclin F protein. 31 3.4
BC012349-1|AAH12349.1| 786|Homo sapiens cyclin F protein. 31 3.4
AF174599-1|AAF04520.1| 197|Homo sapiens F-box protein Fbx11 pro... 30 7.8
>BC091496-1|AAH91496.1| 620|Homo sapiens FBXO21 protein protein.
Length = 620
Score = 35.1 bits (77), Expect = 0.28
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 232 IYSLPAEVISIIL--KNNDCQEILNFSSTCKHFNELVNTDQQLWKEKLKELIPDAAFVVV 405
+ +LP EV+ IL + +I SSTC+ EL + ++WKE+ + P + +
Sbjct: 29 LVNLPGEVLEYILCCGSLTAADIGRVSSTCRRLRELCQSSGKVWKEQFRVRWP--SLMKH 86
Query: 406 ESDCHDGDWLEEIK 447
S +WLEE K
Sbjct: 87 YSPTDYVNWLEEYK 100
>AF174601-1|AAF04522.1| 621|Homo sapiens F-box protein Fbx21
protein.
Length = 621
Score = 35.1 bits (77), Expect = 0.28
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 232 IYSLPAEVISIIL--KNNDCQEILNFSSTCKHFNELVNTDQQLWKEKLKELIPDAAFVVV 405
+ +LP EV+ IL + +I SSTC+ EL + ++WKE+ + P + +
Sbjct: 30 LVNLPGEVLEYILCCGSLTAADIGRVSSTCRRLRELCQSSGKVWKEQFRVRWP--SLMKH 87
Query: 406 ESDCHDGDWLEEIK 447
S +WLEE K
Sbjct: 88 YSPTDYVNWLEEYK 101
>AB020682-1|BAA74898.1| 621|Homo sapiens KIAA0875 protein protein.
Length = 621
Score = 35.1 bits (77), Expect = 0.28
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 232 IYSLPAEVISIIL--KNNDCQEILNFSSTCKHFNELVNTDQQLWKEKLKELIPDAAFVVV 405
+ +LP EV+ IL + +I SSTC+ EL + ++WKE+ + P + +
Sbjct: 30 LVNLPGEVLEYILCCGSLTAADIGRVSSTCRRLRELCQSSGKVWKEQFRVRWP--SLMKH 87
Query: 406 ESDCHDGDWLEEIK 447
S +WLEE K
Sbjct: 88 YSPTDYVNWLEEYK 101
>DQ904332-1|ABI98402.1| 155|Homo sapiens F-box only protein 48
protein.
Length = 155
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 241 LPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWK 360
LPAE+ I D + + S TC+ +N+ + LWK
Sbjct: 38 LPAEITFKIFSQLDIRSLCRASLTCRSWNDTIRNSDSLWK 77
>BC089423-1|AAH89423.1| 155|Homo sapiens hypothetical protein
LOC554251 protein.
Length = 155
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 241 LPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWK 360
LPAE+ I D + + S TC+ +N+ + LWK
Sbjct: 38 LPAEITFKIFSQLDIRSLCRASLTCRSWNDTIRNSDSLWK 77
>Z36714-1|CAA85308.1| 786|Homo sapiens cyclin F protein.
Length = 786
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 199 RKIHIMDEELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWK-EKLKE 375
R+I L+I SLP +V+ ILK ++IL + +LV+ +W +E
Sbjct: 21 RRIRRRPRNLTILSLPEDVLFHILKWLSVEDILAVRAVHSQLKDLVDNHASVWACASFQE 80
Query: 376 LIPDAA-FVVVESDCHDGDWLEEIK-GFYYIKN 468
L P + E G++ +K G Y+ N
Sbjct: 81 LWPSPGNLKLFERAAEKGNFEAAVKLGIAYLYN 113
>U17105-1|AAB60342.1| 786|Homo sapiens cyclin F protein.
Length = 786
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 199 RKIHIMDEELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWK-EKLKE 375
R+I L+I SLP +V+ ILK ++IL + +LV+ +W +E
Sbjct: 21 RRIRRRPRNLTILSLPEDVLFHILKWLSVEDILAVRAVHSQLKDLVDNHASVWACASFQE 80
Query: 376 LIPDAA-FVVVESDCHDGDWLEEIK-GFYYIKN 468
L P + E G++ +K G Y+ N
Sbjct: 81 LWPSPGNLKLFERAAEKGNFEAAVKLGIAYLYN 113
>BC012349-1|AAH12349.1| 786|Homo sapiens cyclin F protein.
Length = 786
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 199 RKIHIMDEELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWK-EKLKE 375
R+I L+I SLP +V+ ILK ++IL + +LV+ +W +E
Sbjct: 21 RRIRRRPRNLTILSLPEDVLFHILKWLSVEDILAVRAVHSQLKDLVDNHASVWACASFQE 80
Query: 376 LIPDAA-FVVVESDCHDGDWLEEIK-GFYYIKN 468
L P + E G++ +K G Y+ N
Sbjct: 81 LWPSPGNLKLFERAAEKGNFEAAVKLGIAYLYN 113
>AF174599-1|AAF04520.1| 197|Homo sapiens F-box protein Fbx11
protein.
Length = 197
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 241 LPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWKEKLKEL 378
LP EV+ I Q++ + CK F+EL N D LWK E+
Sbjct: 144 LPDEVVLKIFSYLLEQDLCRAACVCKRFSELAN-DPNLWKRLYMEV 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,661,884
Number of Sequences: 237096
Number of extensions: 1998121
Number of successful extensions: 3180
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3180
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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