Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C15
         (430 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.23 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.23 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.23 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.23 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   2.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   2.8  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   3.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 118  DALXNAHWTDDPCVRTCDDPYLTNT 192
            D L N +W +DP VR  +  +L++T
Sbjct: 1207 DDLVNPYWIEDPDVRKGEVEFLSST 1231


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 118  DALXNAHWTDDPCVRTCDDPYLTNT 192
            D L N +W +DP VR  +  +L++T
Sbjct: 1207 DDLVNPYWIEDPDVRKGEVEFLSST 1231


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 118  DALXNAHWTDDPCVRTCDDPYLTNT 192
            D L N +W +DP VR  +  +L++T
Sbjct: 1207 DDLVNPYWIEDPDVRKGEVEFLSST 1231


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 118  DALXNAHWTDDPCVRTCDDPYLTNT 192
            D L N +W +DP VR  +  +L++T
Sbjct: 1207 DDLVNPYWIEDPDVRKGEVEFLSST 1231


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 87  MALEASTTEYGCP 125
           + LE +  EYGCP
Sbjct: 183 ICLEGTAREYGCP 195


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 87  MALEASTTEYGCP 125
           + LE +  EYGCP
Sbjct: 183 ICLEGTAREYGCP 195


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 331 TFNKITKKDYKSL 293
           TF+  TK DYKSL
Sbjct: 29  TFSDDTKPDYKSL 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,561
Number of Sequences: 336
Number of extensions: 1044
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)