Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C15
         (430 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0051 + 21923402-21923763,21923861-21923951,21924048-219241...    27   4.9  
01_06_1681 - 39129620-39130120                                         27   8.5  

>05_05_0051 +
           21923402-21923763,21923861-21923951,21924048-21924196,
           21924279-21924522,21924664-21924768,21924842-21925024,
           21925118-21925319,21925896-21926372,21926680-21926771,
           21927265-21927444
          Length = 694

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 136 HWTDDPCVRTCDDP 177
           HWT  PCV  C DP
Sbjct: 143 HWTFAPCVAVCRDP 156


>01_06_1681 - 39129620-39130120
          Length = 166

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -3

Query: 116 IFGSAGLESHHGDNQEHDKVLFGGHLRXIFQTTAFQ 9
           +  S GL+ H G++++ ++   GGH R +    A +
Sbjct: 104 VTSSNGLQGHTGEDEDDNEEATGGHGRGVLPEVAVE 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,988,305
Number of Sequences: 37544
Number of extensions: 124108
Number of successful extensions: 326
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 326
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)