Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_C15
(430 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of s... 37 0.005
Z79756-10|CAL36507.1| 80|Caenorhabditis elegans Hypothetical p... 37 0.007
U50311-8|AAA92312.1| 145|Caenorhabditis elegans Hypothetical pr... 36 0.012
U50311-11|AAN84861.1| 86|Caenorhabditis elegans Inhibitor of s... 33 0.087
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 32 0.20
AC024817-39|AAP68916.1| 128|Caenorhabditis elegans Hypothetical... 29 1.1
Z66561-8|CAI79121.1| 137|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical p... 28 2.5
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical pr... 28 2.5
U50311-9|AAA92313.1| 137|Caenorhabditis elegans Hypothetical pr... 28 2.5
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 3.3
AF016668-4|AAO12440.1| 222|Caenorhabditis elegans Hypothetical ... 28 3.3
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 27 5.7
Z82280-5|CAB05266.1| 294|Caenorhabditis elegans Hypothetical pr... 27 7.5
>U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform a
protein.
Length = 135
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 154 CVRTCDDPY-LTNTACVG-ALIQTCHCNDGLVFNADRKCVPISDC 282
C TC+ T AC ++ TC C DG V N+ KCV +S+C
Sbjct: 29 CHNTCEPQCGYTPKACTEQCIMNTCDCKDGFVRNSLGKCVEVSEC 73
>Z79756-10|CAL36507.1| 80|Caenorhabditis elegans Hypothetical
protein F53C11.9 protein.
Length = 80
Score = 36.7 bits (81), Expect = 0.007
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 151 PCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNAD-RKCVPISDC 282
PC RTC++P N C+ C C G V +++ +KC+ + C
Sbjct: 35 PCDRTCENP---NPMCIQMCKARCECKQGFVVDSNTKKCIDLKKC 76
>U50311-8|AAA92312.1| 145|Caenorhabditis elegans Hypothetical
protein C25E10.7 protein.
Length = 145
Score = 35.9 bits (79), Expect = 0.012
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 154 CVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC*N 288
C TCDDPY T+ + C C GLV N+ C + +C N
Sbjct: 91 CQPTCDDPYPTSCEHDRCIRNVCRCLPGLVRNSG-TCTSLDECDN 134
>U50311-11|AAN84861.1| 86|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform b
protein.
Length = 86
Score = 33.1 bits (72), Expect = 0.087
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 211 IQTCHCNDGLVFNADRKCVPISDC 282
+ TC C DG V N+ KCV +S+C
Sbjct: 1 MNTCDCKDGFVRNSLGKCVEVSEC 24
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 31.9 bits (69), Expect = 0.20
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 154 CVRTCDDPYLTNTAC-VGALIQTCHCNDGLVFNADRKCVPISDC 282
C TC+ P N C V +C C G V++ R+C+P + C
Sbjct: 42 CPPTCESP---NPQCRVDCTRPSCTCLPGHVYSNSRQCIPANSC 82
>AC024817-39|AAP68916.1| 128|Caenorhabditis elegans Hypothetical
protein Y54G2A.36 protein.
Length = 128
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 196 CVGALIQTCHCN---DGLVFNADRKCVPISDC 282
C+GAL+ TC+CN DG D C + C
Sbjct: 40 CIGALVGTCNCNSCVDGWPCQEDSACGGFNRC 71
>Z66561-8|CAI79121.1| 137|Caenorhabditis elegans Hypothetical
protein F08G12.11 protein.
Length = 137
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +1
Query: 145 DDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKC 264
++ C T D+P + +C G L++ C C N + C
Sbjct: 25 EENCTLTVDNPGINTKSCEGYLMEECACVQRRSVNFEYDC 64
>Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical
protein ZK262.11 protein.
Length = 338
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 27 KNXTKMAAKQYFIVFLIVAVMALEASTTEYGCP 125
K +MAA +++++ + V+VMAL+ S T G P
Sbjct: 43 KTPLQMAAVKWYLLQMHVSVMALDYSVTVVGIP 75
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +1
Query: 148 DPCV-RTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC 282
+PC + C C+ A C C DG V N CV ++C
Sbjct: 110 NPCTEKKCPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAEC 155
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +1
Query: 148 DPCV-RTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC 282
+PC + C C+ A C C DG V N CV ++C
Sbjct: 110 NPCTEKKCPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAEC 155
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +1
Query: 148 DPCV-RTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC 282
+PC + C C+ A C C DG V N CV ++C
Sbjct: 110 NPCTEKKCPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAEC 155
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 196 CVGALIQTCHCNDGLVFNADRKCVPISDC 282
C+ + C C GLV N +CV +++C
Sbjct: 256 CMMRCEKACSCKKGLVRNRQGQCVKLAEC 284
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +1
Query: 148 DPCV-RTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC 282
+PC + C C+ A C C DG V N CV ++C
Sbjct: 110 NPCTEKKCPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAEC 155
>Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical
protein C43D7.6 protein.
Length = 338
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 27 KNXTKMAAKQYFIVFLIVAVMALEASTTEYGCP 125
K +MAA +++++ + V+VMAL+ S T G P
Sbjct: 43 KTPLQMAAVKWYLLQMHVSVMALDYSVTVVGIP 75
>U50311-9|AAA92313.1| 137|Caenorhabditis elegans Hypothetical
protein C25E10.8 protein.
Length = 137
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +1
Query: 148 DPCVRTCDDPYLTNTACVGA--LIQTCHCNDGLVFNADRKCVPISDC 282
D C C T C+ A + C C G V N+ KCV IS C
Sbjct: 32 DHCETQCG---YTPKVCLSAQCIENACDCKKGFVRNSLGKCVDISTC 75
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical
protein ZK783.1 protein.
Length = 2585
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 187 NTACVGALIQTCHCNDGLVFNADRKCVPISDC 282
N C A TC C DG + +KCV I++C
Sbjct: 393 NAICSNA---TCACIDGFRGDPHKKCVDINEC 421
>AF016668-4|AAO12440.1| 222|Caenorhabditis elegans Hypothetical
protein F36H9.4 protein.
Length = 222
Score = 27.9 bits (59), Expect = 3.3
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 208 LIQTCHCNDGLVFNADRKCVPI 273
++ C C DG N D+KC +
Sbjct: 54 IVNVCQCKDGFFRNKDKKCAHV 75
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 118 DALXNAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNAD 255
+ L N H+ DDP V T D AC G +I N+ V++ D
Sbjct: 81 NTLINQHFNDDPGVETSPDHV---RACTGIIIVKGATNNKNVYSLD 123
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = +1
Query: 148 DPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC 282
+PC L T C Q C C G + ++D +C DC
Sbjct: 751 NPCSEDKCPGILKKTECTNRCGQGCACAYGYLRSSDGECYKPKDC 795
>Z82280-5|CAB05266.1| 294|Caenorhabditis elegans Hypothetical
protein R05A10.5 protein.
Length = 294
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +1
Query: 157 VRTCDDPYLTNTACVGALIQTCHCN-DGLVFNADRKCVP 270
+RTC L N AC GA + CN + A + C P
Sbjct: 58 IRTCLSSELGNCACSGAPSRYIPCNLSACKYPAQKTCCP 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,835,121
Number of Sequences: 27780
Number of extensions: 105355
Number of successful extensions: 304
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -