Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C15
         (430 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    28   0.051
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    28   0.051
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   2.5  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   7.7  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   7.7  

>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 27.9 bits (59), Expect = 0.051
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +1

Query: 145 DDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC 282
           D  C R C +  +    C+      C C  G + N  + CVP S C
Sbjct: 47  DGRCQRFCPN-VVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 27.9 bits (59), Expect = 0.051
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +1

Query: 145 DDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADRKCVPISDC 282
           D  C R C +  +    C+      C C  G + N  + CVP S C
Sbjct: 47  DGRCQRFCPN-VVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 121 ALXNAHWTDDPCVR 162
           AL   H+  DPCVR
Sbjct: 709 ALDRLHYETDPCVR 722


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 259 KCVPISDC*NVITIYNL 309
           KC+P S   N   IYNL
Sbjct: 113 KCLPTSGSDNCNKIYNL 129


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 259 KCVPISDC*NVITIYNL 309
           KC+P S   N   IYNL
Sbjct: 113 KCLPTSGSDNCNKIYNL 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,114
Number of Sequences: 438
Number of extensions: 1286
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)