Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_C12
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 30 1.2
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 30 1.2
AL132862-23|CAB60559.1| 540|Caenorhabditis elegans Hypothetical... 29 1.7
AF077536-5|ABO16441.1| 278|Caenorhabditis elegans Hypothetical ... 29 2.2
AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical ... 27 6.7
AC084154-4|AAK29868.1| 767|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +3
Query: 141 SAILDFFSLTSNVSSTRTGVPLXAKELKEHIREALETECAKCTEAQKKGTRRVIGHLINN 320
S ++D + S T PL E+ + + + T+ K TEA K+ + +G +N
Sbjct: 589 SVVIDGPTAVSRPIQRATKYPLFLNEIVK-LTPLVHTDHPKLTEAIKQMSN--LGQKMN- 644
Query: 321 ESKSWNELTAKYDPENKFT 377
ESK ELT KY ++K T
Sbjct: 645 ESKRRKELTQKYMSDDKQT 663
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +3
Query: 141 SAILDFFSLTSNVSSTRTGVPLXAKELKEHIREALETECAKCTEAQKKGTRRVIGHLINN 320
S ++D + S T PL E+ + + + T+ K TEA K+ + +G +N
Sbjct: 589 SVVIDGPTAVSRPIQRATKYPLFLNEIVK-LTPLVHTDHPKLTEAIKQMSN--LGQKMN- 644
Query: 321 ESKSWNELTAKYDPENKFT 377
ESK ELT KY ++K T
Sbjct: 645 ESKRRKELTQKYMSDDKQT 663
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +3
Query: 141 SAILDFFSLTSNVSSTRTGVPLXAKELKEHIREALETECAKCTEAQKKGTRRVIGHLINN 320
S ++D + S T PL E+ + + + T+ K TEA K+ + +G +N
Sbjct: 589 SVVIDGPTAVSRPIQRATKYPLFLNEIVK-LTPLVHTDHPKLTEAIKQMSN--LGQKMN- 644
Query: 321 ESKSWNELTAKYDPENKFT 377
ESK ELT KY ++K T
Sbjct: 645 ESKRRKELTQKYMSDDKQT 663
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +3
Query: 141 SAILDFFSLTSNVSSTRTGVPLXAKELKEHIREALETECAKCTEAQKKGTRRVIGHLINN 320
S ++D + S T PL E+ + + + T+ K TEA K+ + +G +N
Sbjct: 589 SVVIDGPTAVSRPIQRATKYPLFLNEIVK-LTPLVHTDHPKLTEAIKQMSN--LGQKMN- 644
Query: 321 ESKSWNELTAKYDPENKFT 377
ESK ELT KY ++K T
Sbjct: 645 ESKRRKELTQKYMSDDKQT 663
>AL132862-23|CAB60559.1| 540|Caenorhabditis elegans Hypothetical
protein Y73F8A.30 protein.
Length = 540
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +2
Query: 38 PSSHSAC-LPFWPWLSPVPDXKYTDRYDNVNLDEVLSNSR--LLQPYIKCILDKDRCAP 205
P AC L W S D Y +++VN+D L N ++ IK + +K C P
Sbjct: 140 PYDQQACKLTISSWTSSKSDINYEPEHESVNMDNFLPNEEWVVVSFNIKRVEEKFVCCP 198
>AF077536-5|ABO16441.1| 278|Caenorhabditis elegans Hypothetical
protein C16A11.9 protein.
Length = 278
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/66 (22%), Positives = 32/66 (48%)
Frame = +3
Query: 213 KELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKYEK 392
K L+ + R L +C+ + +K + + N + S+N + K +NKF A +
Sbjct: 16 KHLEANKRFQLVAQCSSLVKVEKSQPLVIKKLIFNRRTISFNGVKYKLGAKNKFEAPHTL 75
Query: 393 ELREIK 410
++++K
Sbjct: 76 AIKQLK 81
>AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical
protein Y59A8B.6 protein.
Length = 968
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 231 IREALETECAKCTEAQKKGTRRVIGHLINNESK--SWNELTAKYDPENKFT 377
+++A++ E AKC + R VIG + +E K +W ++ E FT
Sbjct: 533 LKDAVDAEMAKCPITCQAIIRNVIGLGVEDEDKRTTWLADAENFEKEEAFT 583
>AC084154-4|AAK29868.1| 767|Caenorhabditis elegans Hypothetical
protein Y22D7AR.7 protein.
Length = 767
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 276 QKKGTRRVIGHLINNESKSWNELTAKYDPEN 368
Q++ T V+ +N E +WN + KY PE+
Sbjct: 544 QERVTHIVMLGQVNEEDANWNRMFCKYFPES 574
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,612,120
Number of Sequences: 27780
Number of extensions: 211798
Number of successful extensions: 593
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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