Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_C12
(547 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 66 2e-13
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 65 5e-13
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 65 5e-13
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 57 1e-10
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 57 1e-10
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 56 2e-10
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 56 2e-10
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 44 1e-06
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 44 1e-06
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 28 0.054
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 24 0.88
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 24 0.88
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 2.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.2
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 8.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.2
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 8.2
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 8.2
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 8.2
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 66.1 bits (154), Expect = 2e-13
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = +3
Query: 216 ELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKYEKE 395
ELK + +AL T+C KCT+ Q++ ++VI L+ N+ + W+ L KYDP+ KF K+E+E
Sbjct: 63 ELKRVLPDALATDCKKCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKFRVKFEEE 122
Query: 396 LREI 407
+++
Sbjct: 123 AKKL 126
Score = 54.4 bits (125), Expect = 7e-10
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +2
Query: 89 PDXKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRC 199
PD YT ++DN+N+DE+L + RLL Y KC++D+ RC
Sbjct: 21 PDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRC 57
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 64.9 bits (151), Expect = 5e-13
Identities = 25/64 (39%), Positives = 44/64 (68%)
Frame = +3
Query: 216 ELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKYEKE 395
ELK + +AL T+C KCT+ Q++ ++VI L+ N+ + W+ L KYDP+ K+ K+E+E
Sbjct: 63 ELKRVLPDALATDCKKCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKYRVKFEEE 122
Query: 396 LREI 407
+++
Sbjct: 123 AKKL 126
Score = 54.4 bits (125), Expect = 7e-10
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +2
Query: 89 PDXKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRC 199
PD YT ++DN+N+DE+L + RLL Y KC++D+ RC
Sbjct: 21 PDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRC 57
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 64.9 bits (151), Expect = 5e-13
Identities = 25/64 (39%), Positives = 44/64 (68%)
Frame = +3
Query: 216 ELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKYEKE 395
ELK + +AL T+C KCT+ Q++ ++VI L+ N+ + W+ L KYDP+ K+ K+E+E
Sbjct: 63 ELKRVLPDALATDCKKCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKYRVKFEEE 122
Query: 396 LREI 407
+++
Sbjct: 123 AKKL 126
Score = 54.4 bits (125), Expect = 7e-10
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +2
Query: 89 PDXKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRC 199
PD YT ++DN+N+DE+L + RLL Y KC++D+ RC
Sbjct: 21 PDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRC 57
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 57.2 bits (132), Expect = 1e-10
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +3
Query: 210 AKELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKY 386
A ELK ++ +ALE EC+ C+E QKK +V+ LI+N+ + W L AKYDP + Y
Sbjct: 60 AAELKRNLPDALENECSPCSEKQKKIADKVVQFLIDNKPEIWVLLEAKYDPTGAYKQHY 118
Score = 50.4 bits (115), Expect = 1e-08
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +2
Query: 92 DXKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRCAP 205
+ KYT +YDNV++D VL+ RLL Y+ C+LD+ C P
Sbjct: 21 EDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTP 58
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 57.2 bits (132), Expect = 1e-10
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +3
Query: 210 AKELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKY 386
A ELK ++ +ALE EC+ C+E QKK +V+ LI+N+ + W L AKYDP + Y
Sbjct: 60 AAELKRNLPDALENECSPCSEKQKKIADKVVQFLIDNKPEIWVLLEAKYDPTGAYKQHY 118
Score = 50.4 bits (115), Expect = 1e-08
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +2
Query: 92 DXKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRCAP 205
+ KYT +YDNV++D VL+ RLL Y+ C+LD+ C P
Sbjct: 21 EDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTP 58
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 56.4 bits (130), Expect = 2e-10
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 213 KELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKYEK 392
+ELK+ + +AL T C KC E QK +V+ +L K W L+AKYD ++ +YE
Sbjct: 58 RELKKILPDALSTGCNKCNEKQKHTANKVVNYLKTKRPKDWERLSAKYDSTGEYKKRYEH 117
Query: 393 ELREIK 410
L+ K
Sbjct: 118 GLQFAK 123
Score = 44.8 bits (101), Expect = 6e-07
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +2
Query: 101 YTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRC 199
YT +YD++++D +L N R+L YIKC+LD+ C
Sbjct: 21 YTTKYDDMDIDRILQNGRILTNYIKCMLDEGPC 53
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 56.4 bits (130), Expect = 2e-10
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 213 KELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKYEK 392
+ELK+ + +AL T C KC E QK +V+ +L K W L+AKYD ++ +YE
Sbjct: 58 RELKKILPDALSTGCNKCNEKQKHTANKVVNYLKTKRPKDWERLSAKYDSTGEYKKRYEH 117
Query: 393 ELREIK 410
L+ K
Sbjct: 118 GLQFAK 123
Score = 44.8 bits (101), Expect = 6e-07
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +2
Query: 101 YTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRC 199
YT +YD++++D +L N R+L YIKC+LD+ C
Sbjct: 21 YTTKYDDMDIDRILQNGRILTNYIKCMLDEGPC 53
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 43.6 bits (98), Expect = 1e-06
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 101 YTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRC 199
Y+D+YD VN+DE+L+N RL Y C +D C
Sbjct: 23 YSDKYDYVNIDEILANDRLRNQYYDCFIDAGSC 55
Score = 43.6 bits (98), Expect = 1e-06
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 222 KEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWN 338
K HI EA +T+C KCTE QK+ ++ NE + WN
Sbjct: 64 KSHITEAFQTQCKKCTEIQKQNLDKLAEWFTTNEPEKWN 102
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 43.6 bits (98), Expect = 1e-06
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 101 YTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRC 199
Y+D+YD VN+DE+L+N RL Y C +D C
Sbjct: 23 YSDKYDYVNIDEILANDRLRNQYYDCFIDAGSC 55
Score = 43.6 bits (98), Expect = 1e-06
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 222 KEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWN 338
K HI EA +T+C KCTE QK+ ++ NE + WN
Sbjct: 64 KSHITEAFQTQCKKCTEIQKQNLDKLAEWFTTNEPEKWN 102
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 28.3 bits (60), Expect = 0.054
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 213 KELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWNELTAKY 356
K++KE + E L C +CT Q +I + N W + +Y
Sbjct: 51 KKIKELLPEVLNNHCNRCTSRQIGIANTLIPFMQQNYPYEWQLILRRY 98
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +2
Query: 125 NLDEVLSNSRLLQPYIKCILDKDRC 199
++ + L + +Q + CILD+ C
Sbjct: 22 DISKFLKDRPYVQKQLHCILDRGHC 46
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 24.2 bits (50), Expect = 0.88
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 110 RYDNVNLDEVLSNSRLLQPYIKCILDKDRCAP 205
R + L+ LS+ R L+ +KC L + C P
Sbjct: 32 RVSDEQLNMALSDQRYLRRQLKCALGEAPCDP 63
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 24.2 bits (50), Expect = 0.88
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 110 RYDNVNLDEVLSNSRLLQPYIKCILDKDRCAP 205
R + L+ LS+ R L+ +KC L + C P
Sbjct: 32 RVSDEQLNMALSDQRYLRRQLKCALGEAPCDP 63
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 2.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 202 GTPVLVEDTFDVRLKKS 152
G PV+ E+T D L+KS
Sbjct: 167 GKPVVAEETVDYMLEKS 183
Score = 21.4 bits (43), Expect = 6.2
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 172 QMYPRQGQVCPXTLRS 219
Q+YP Q+CP + S
Sbjct: 121 QLYPMDIQICPIYIES 136
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 6.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = -2
Query: 285 PSSGLRYISRIRSRVPP 235
P++ +RY ++++ +VPP
Sbjct: 694 PAAEVRYTAKLQVKVPP 710
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -1
Query: 355 YLAVSSFQDLLSLLIRWPITRRVPF 281
Y SF+D RW T PF
Sbjct: 440 YFVADSFEDAKEKFRRWVSTMSRPF 464
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +2
Query: 131 DEVLSNSRLLQPYIKCILDK 190
+EVL ++++Q I+ +LD+
Sbjct: 437 EEVLKEAKIIQEEIRTLLDE 456
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 86 VPDXKYTDRYDNVNLDEVLSNSRLLQPY 169
VP K NV +++ + RLLQPY
Sbjct: 84 VPRYKGVPSSLNVISEKIGNGGRLLQPY 111
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 215 LSVQGHTCPCRGYI*CKAEEVE 150
+ +G C C I C AE+ E
Sbjct: 78 ICAEGMQCSCNKCIGCSAEKFE 99
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +2
Query: 131 DEVLSNSRLLQPYIKCILDK 190
+EVL ++++Q I+ +LD+
Sbjct: 143 EEVLKEAKIIQEEIRTLLDE 162
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,866
Number of Sequences: 438
Number of extensions: 2621
Number of successful extensions: 35
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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