BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_F_C10 (694 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC004485-1|AAH04485.1| 194|Homo sapiens chromosome 1 open readi... 202 7e-52 AL451007-2|CAH70880.1| 194|Homo sapiens chromosome 1 open readi... 202 7e-52 AF151904-1|AAD34141.1| 193|Homo sapiens CGI-146 protein protein. 202 7e-52 AL451007-4|CAH70881.1| 101|Homo sapiens chromosome 1 open readi... 103 5e-22 AL451007-3|CAH70879.1| 161|Homo sapiens chromosome 1 open readi... 100 4e-21 AF229834-1|AAF42919.1| 163|Homo sapiens apoptosis-related prote... 100 4e-21 Z83840-1|CAI17917.1| 168|Homo sapiens protein ( Human DNA seque... 49 1e-05 CR456458-1|CAG30344.1| 168|Homo sapiens dJ347H13.4 protein. 49 1e-05 BC112179-1|AAI12180.1| 168|Homo sapiens hypothetical protein LO... 49 1e-05 BC093956-1|AAH93956.1| 168|Homo sapiens DNA segment, Chr 15, Wa... 49 1e-05 AL023553-1|CAI20277.1| 168|Homo sapiens protein ( Human DNA seq... 49 1e-05 X64228-1|CAA45535.1| 2090|Homo sapiens putative oncogene protein. 30 9.0 D14689-1|BAA03515.1| 2093|Homo sapiens KIAA0023 protein. 30 9.0 BC105998-1|AAI05999.1| 2080|Homo sapiens NUP214 protein protein. 30 9.0 BC052957-1|AAH52957.1| 310|Homo sapiens family with sequence si... 30 9.0 BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa prot... 30 9.0 AL157938-9|CAI41111.1| 2090|Homo sapiens nucleoporin 214kDa prot... 30 9.0 AL157938-8|CAI41109.1| 1684|Homo sapiens nucleoporin 214kDa prot... 30 9.0 AJ417849-1|CAD10629.1| 310|Homo sapiens NSE2 protein protein. 30 9.0 AB159230-1|BAD07398.1| 2091|Homo sapiens KIAA0023 splice variant... 30 9.0 >BC004485-1|AAH04485.1| 194|Homo sapiens chromosome 1 open reading frame 121 protein. Length = 194 Score = 202 bits (494), Expect = 7e-52 Identities = 81/135 (60%), Positives = 110/135 (81%) Frame = +3 Query: 288 VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQ 467 VVLNVYDMYW N YT+ G+GVFHSG++V+G E+AYGGHPY F+G+FEISP + ELGE Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66 Query: 468 FRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFTSAFCMALCSRDIPP 647 F+F+++V +G TDF E+++ ++V ELGK+++G+ YHLM+ NCNHF+SA LC ++IP Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126 Query: 648 WVNRLXYVSSCVPFL 692 W+NRL Y SSC+PFL Sbjct: 127 WINRLAYFSSCIPFL 141 >AL451007-2|CAH70880.1| 194|Homo sapiens chromosome 1 open reading frame 121 protein. Length = 194 Score = 202 bits (494), Expect = 7e-52 Identities = 81/135 (60%), Positives = 110/135 (81%) Frame = +3 Query: 288 VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQ 467 VVLNVYDMYW N YT+ G+GVFHSG++V+G E+AYGGHPY F+G+FEISP + ELGE Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66 Query: 468 FRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFTSAFCMALCSRDIPP 647 F+F+++V +G TDF E+++ ++V ELGK+++G+ YHLM+ NCNHF+SA LC ++IP Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126 Query: 648 WVNRLXYVSSCVPFL 692 W+NRL Y SSC+PFL Sbjct: 127 WINRLAYFSSCIPFL 141 >AF151904-1|AAD34141.1| 193|Homo sapiens CGI-146 protein protein. Length = 193 Score = 202 bits (494), Expect = 7e-52 Identities = 81/135 (60%), Positives = 110/135 (81%) Frame = +3 Query: 288 VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQ 467 VVLNVYDMYW N YT+ G+GVFHSG++V+G E+AYGGHPY F+G+FEISP + ELGE Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66 Query: 468 FRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFTSAFCMALCSRDIPP 647 F+F+++V +G TDF E+++ ++V ELGK+++G+ YHLM+ NCNHF+SA LC ++IP Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126 Query: 648 WVNRLXYVSSCVPFL 692 W+NRL Y SSC+PFL Sbjct: 127 WINRLAYFSSCIPFL 141 >AL451007-4|CAH70881.1| 101|Homo sapiens chromosome 1 open reading frame 121 protein. Length = 101 Score = 103 bits (248), Expect = 5e-22 Identities = 41/70 (58%), Positives = 57/70 (81%) Frame = +3 Query: 312 YWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVH 491 YW N YT+ G+GVFHSG++V+G E+AYGGHPY F+G+FEISP + ELGE F+F+++V Sbjct: 32 YWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVV 91 Query: 492 IGYTDFSEEE 521 +G TDF E++ Sbjct: 92 LGSTDFLEDD 101 >AL451007-3|CAH70879.1| 161|Homo sapiens chromosome 1 open reading frame 121 protein. Length = 161 Score = 100 bits (240), Expect = 4e-21 Identities = 38/73 (52%), Positives = 57/73 (78%) Frame = +3 Query: 474 FRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWV 653 + ++V +G TDF E+++ ++V ELGK+++G+ YHLM+ NCNHF+SA LC ++IP W+ Sbjct: 36 YGRAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWI 95 Query: 654 NRLXYVSSCVPFL 692 NRL Y SSC+PFL Sbjct: 96 NRLAYFSSCIPFL 108 Score = 58.0 bits (134), Expect = 3e-08 Identities = 27/62 (43%), Positives = 39/62 (62%) Frame = +3 Query: 288 VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQ 467 VVLNVYDMYW N YT+ G+GVFHSG++V+G G + + +I ELG++ Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGRAVVLGSTDFLEDDIEKI----VEELGKE 62 Query: 468 FR 473 ++ Sbjct: 63 YK 64 >AF229834-1|AAF42919.1| 163|Homo sapiens apoptosis-related protein PNAS-4 protein. Length = 163 Score = 100 bits (240), Expect = 4e-21 Identities = 38/73 (52%), Positives = 57/73 (78%) Frame = +3 Query: 474 FRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWV 653 + ++V +G TDF E+++ ++V ELGK+++G+ YHLM+ NCNHF+SA LC ++IP W+ Sbjct: 38 YGRAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWI 97 Query: 654 NRLXYVSSCVPFL 692 NRL Y SSC+PFL Sbjct: 98 NRLAYFSSCIPFL 110 Score = 58.0 bits (134), Expect = 3e-08 Identities = 27/62 (43%), Positives = 39/62 (62%) Frame = +3 Query: 288 VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQ 467 VVLNVYDMYW N YT+ G+GVFHSG++V+G G + + +I ELG++ Sbjct: 9 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGRAVVLGSTDFLEDDIEKI----VEELGKE 64 Query: 468 FR 473 ++ Sbjct: 65 YK 66 >Z83840-1|CAI17917.1| 168|Homo sapiens protein ( Human DNA sequence from clone CTA-216E10 on chromosome 22. ). Length = 168 Score = 49.2 bits (112), Expect = 1e-05 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Frame = +3 Query: 348 GVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVR 527 G++H+ + VH E+ +G +G P LG V +G T+ +EE Sbjct: 35 GIWHTSIVVHKDEFFFG------SGGISSCPPGGTLLGPP---DSVVDVGSTEVTEEIFL 85 Query: 528 RLVAELGKQ-FRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWVNRLXYVSSCVPF 689 ++ LG+ FRG+ Y+L +NCN F++ L R IP ++ L PF Sbjct: 86 EYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPF 140 >CR456458-1|CAG30344.1| 168|Homo sapiens dJ347H13.4 protein. Length = 168 Score = 49.2 bits (112), Expect = 1e-05 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Frame = +3 Query: 348 GVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVR 527 G++H+ + VH E+ +G +G P LG V +G T+ +EE Sbjct: 35 GIWHTSIVVHKDEFFFG------SGGISSCPPGGTLLGPP---DSVVDVGSTEVTEEIFL 85 Query: 528 RLVAELGKQ-FRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWVNRLXYVSSCVPF 689 ++ LG+ FRG+ Y+L +NCN F++ L R IP ++ L PF Sbjct: 86 EYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPF 140 >BC112179-1|AAI12180.1| 168|Homo sapiens hypothetical protein LOC27351 protein. Length = 168 Score = 49.2 bits (112), Expect = 1e-05 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Frame = +3 Query: 348 GVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVR 527 G++H+ + VH E+ +G +G P LG V +G T+ +EE Sbjct: 35 GIWHTSIVVHKDEFFFG------SGGISSCPPGGTLLGPP---DSVVDVGSTEVTEEIFL 85 Query: 528 RLVAELGKQ-FRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWVNRLXYVSSCVPF 689 ++ LG+ FRG+ Y+L +NCN F++ L R IP ++ L PF Sbjct: 86 EYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPF 140 >BC093956-1|AAH93956.1| 168|Homo sapiens DNA segment, Chr 15, Wayne State University 75, expressed protein. Length = 168 Score = 49.2 bits (112), Expect = 1e-05 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Frame = +3 Query: 348 GVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVR 527 G++H+ + VH E+ +G +G P LG V +G T+ +EE Sbjct: 35 GIWHTSIVVHKDEFFFG------SGGISSCPPGGTLLGPP---DSVVDVGSTEVTEEIFL 85 Query: 528 RLVAELGKQ-FRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWVNRLXYVSSCVPF 689 ++ LG+ FRG+ Y+L +NCN F++ L R IP ++ L PF Sbjct: 86 EYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPF 140 >AL023553-1|CAI20277.1| 168|Homo sapiens protein ( Human DNA sequence from clone RP3-347H13 on chromosome 22 Contains the 3' end of the ACO2 gene for mitochondrial aconitase 2, the gene Statin S). Length = 168 Score = 49.2 bits (112), Expect = 1e-05 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Frame = +3 Query: 348 GVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVR 527 G++H+ + VH E+ +G +G P LG V +G T+ +EE Sbjct: 35 GIWHTSIVVHKDEFFFG------SGGISSCPPGGTLLGPP---DSVVDVGSTEVTEEIFL 85 Query: 528 RLVAELGKQ-FRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWVNRLXYVSSCVPF 689 ++ LG+ FRG+ Y+L +NCN F++ L R IP ++ L PF Sbjct: 86 EYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPF 140 >X64228-1|CAA45535.1| 2090|Homo sapiens putative oncogene protein. Length = 2090 Score = 29.9 bits (64), Expect = 9.0 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +2 Query: 122 MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280 + +T + + +E A TS K + +V+ RH PV+ +I P LP AP A++ Sbjct: 984 VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 1038 >D14689-1|BAA03515.1| 2093|Homo sapiens KIAA0023 protein. Length = 2093 Score = 29.9 bits (64), Expect = 9.0 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +2 Query: 122 MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280 + +T + + +E A TS K + +V+ RH PV+ +I P LP AP A++ Sbjct: 973 VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 1027 >BC105998-1|AAI05999.1| 2080|Homo sapiens NUP214 protein protein. Length = 2080 Score = 29.9 bits (64), Expect = 9.0 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +2 Query: 122 MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280 + +T + + +E A TS K + +V+ RH PV+ +I P LP AP A++ Sbjct: 974 VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 1028 >BC052957-1|AAH52957.1| 310|Homo sapiens family with sequence similarity 84, member B protein. Length = 310 Score = 29.9 bits (64), Expect = 9.0 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%) Frame = +2 Query: 401 SSVRVHRGLRDIAA--RRTGTRGAVSIQAECTYRIYRFQRGGSKKISRRTREAIQR*QIP 574 SS V L + A R R + S A C Y F+ GG +I ++ R QI Sbjct: 178 SSAVVRNALAHVGAKERELSWRNSESFAAWCRYGKREFKIGGELRIGKQP----YRLQIQ 233 Query: 575 FNEQ*LQSFHFSLLHGVVL--TRHSAVGESAXVREL 676 + Q + F L +++ R+ +G +A ++EL Sbjct: 234 LSAQRSHTLEFQSLEDLIMEKRRNDQIGRAAVLQEL 269 >BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa protein. Length = 2090 Score = 29.9 bits (64), Expect = 9.0 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +2 Query: 122 MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280 + +T + + +E A TS K + +V+ RH PV+ +I P LP AP A++ Sbjct: 984 VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 1038 >AL157938-9|CAI41111.1| 2090|Homo sapiens nucleoporin 214kDa protein. Length = 2090 Score = 29.9 bits (64), Expect = 9.0 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +2 Query: 122 MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280 + +T + + +E A TS K + +V+ RH PV+ +I P LP AP A++ Sbjct: 984 VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 1038 >AL157938-8|CAI41109.1| 1684|Homo sapiens nucleoporin 214kDa protein. Length = 1684 Score = 29.9 bits (64), Expect = 9.0 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +2 Query: 122 MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280 + +T + + +E A TS K + +V+ RH PV+ +I P LP AP A++ Sbjct: 578 VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 632 >AJ417849-1|CAD10629.1| 310|Homo sapiens NSE2 protein protein. Length = 310 Score = 29.9 bits (64), Expect = 9.0 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%) Frame = +2 Query: 401 SSVRVHRGLRDIAA--RRTGTRGAVSIQAECTYRIYRFQRGGSKKISRRTREAIQR*QIP 574 SS V L + A R R + S A C Y F+ GG +I ++ R QI Sbjct: 178 SSAVVRNALAHVGAKERELSWRNSESFAAWCRYGKREFKIGGELRIGKQP----YRLQIQ 233 Query: 575 FNEQ*LQSFHFSLLHGVVL--TRHSAVGESAXVREL 676 + Q + F L +++ R+ +G +A ++EL Sbjct: 234 LSAQRSHTLEFQSLEDLIMEKRRNDQIGRAAVLQEL 269 >AB159230-1|BAD07398.1| 2091|Homo sapiens KIAA0023 splice variant 1 protein. Length = 2091 Score = 29.9 bits (64), Expect = 9.0 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +2 Query: 122 MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280 + +T + + +E A TS K + +V+ RH PV+ +I P LP AP A++ Sbjct: 985 VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 1039 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 102,121,403 Number of Sequences: 237096 Number of extensions: 2255995 Number of successful extensions: 5309 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4991 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5308 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 7951235188 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -