Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C10
         (694 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53181-11|AAM29689.1|  315|Caenorhabditis elegans Hypothetical p...   182   2e-46
U53181-10|AAA93489.2|  334|Caenorhabditis elegans Hypothetical p...   182   2e-46
U64855-4|AAB04983.1|  445|Caenorhabditis elegans Hypothetical pr...    31   1.0  
AL110500-1|CAB60426.3|  780|Caenorhabditis elegans Hypothetical ...    28   5.5  
AC024788-4|ABE73331.1|  305|Caenorhabditis elegans Hypothetical ...    28   7.3  
Z82258-2|CAL63988.1|  128|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AL132859-1|CAB60494.1|  276|Caenorhabditis elegans Hypothetical ...    27   9.6  

>U53181-11|AAM29689.1|  315|Caenorhabditis elegans Hypothetical
           protein F36D4.5b protein.
          Length = 315

 Score =  182 bits (443), Expect = 2e-46
 Identities = 76/137 (55%), Positives = 103/137 (75%), Gaps = 1/137 (0%)
 Frame = +3

Query: 285 TVV-LNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELG 461
           TVV LNVYDMYW N Y +  G+G+FHSG++V G E+AYGGHPY F+GVFE SP+D  ELG
Sbjct: 11  TVVRLNVYDMYWLNDYASNIGVGIFHSGIEVFGVEYAYGGHPYQFSGVFENSPQDAEELG 70

Query: 462 EQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFTSAFCMALCSRDI 641
           E F+F++S+ +G T+ S  ++R+L+  LG+ FRGDRYHL++ NCNHF++     L  +DI
Sbjct: 71  ETFKFKESIVVGETERSTSDIRKLIKSLGEDFRGDRYHLISRNCNHFSAVLARELTGKDI 130

Query: 642 PPWVNRLXYVSSCVPFL 692
           P W+NRL  +S  +PFL
Sbjct: 131 PGWINRLANLSGSIPFL 147


>U53181-10|AAA93489.2|  334|Caenorhabditis elegans Hypothetical
           protein F36D4.5a protein.
          Length = 334

 Score =  182 bits (443), Expect = 2e-46
 Identities = 76/137 (55%), Positives = 103/137 (75%), Gaps = 1/137 (0%)
 Frame = +3

Query: 285 TVV-LNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELG 461
           TVV LNVYDMYW N Y +  G+G+FHSG++V G E+AYGGHPY F+GVFE SP+D  ELG
Sbjct: 30  TVVRLNVYDMYWLNDYASNIGVGIFHSGIEVFGVEYAYGGHPYQFSGVFENSPQDAEELG 89

Query: 462 EQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFTSAFCMALCSRDI 641
           E F+F++S+ +G T+ S  ++R+L+  LG+ FRGDRYHL++ NCNHF++     L  +DI
Sbjct: 90  ETFKFKESIVVGETERSTSDIRKLIKSLGEDFRGDRYHLISRNCNHFSAVLARELTGKDI 149

Query: 642 PPWVNRLXYVSSCVPFL 692
           P W+NRL  +S  +PFL
Sbjct: 150 PGWINRLANLSGSIPFL 166


>U64855-4|AAB04983.1|  445|Caenorhabditis elegans Hypothetical
           protein ZK742.4 protein.
          Length = 445

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 348 GVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGE 464
           GV +SG+     +W +GG    FTG   I PR   E G+
Sbjct: 53  GVPNSGLVHLYEKWGFGGFGIVFTGNLVIDPRHPYEAGQ 91


>AL110500-1|CAB60426.3|  780|Caenorhabditis elegans Hypothetical
           protein Y87G2A.1 protein.
          Length = 780

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 207 ICAMFPSCMSLLSRRSDSQHPR 272
           +C +   CMSLL+R  D Q+PR
Sbjct: 602 VCKVEDMCMSLLNRLQDCQNPR 623


>AC024788-4|ABE73331.1|  305|Caenorhabditis elegans Hypothetical
           protein Y46E12A.4 protein.
          Length = 305

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +3

Query: 423 VFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNN 587
           ++EISP        +F+F ++  I  T +  E V++L  +  K  +G R  + +N
Sbjct: 134 IYEISPVGAHNQIGKFQFPETKFIAVTAYQSELVKQLKVQKNKFAQGFRESIKSN 188


>Z82258-2|CAL63988.1|  128|Caenorhabditis elegans Hypothetical
           protein C27H2.5 protein.
          Length = 128

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 489 HIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFT 605
           H G+T         L     +++    YHLMNNN N FT
Sbjct: 74  HNGHTVHGGRHFASLEKSKAQRYSRSEYHLMNNN-NEFT 111


>AL132859-1|CAB60494.1|  276|Caenorhabditis elegans Hypothetical
           protein Y39C12A.1 protein.
          Length = 276

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/19 (52%), Positives = 17/19 (89%)
 Frame = +2

Query: 269 SARTGDRGPQRLRYVLDEL 325
           S++TG+RGP+RL  +L+E+
Sbjct: 124 SSKTGNRGPRRLSELLEEM 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,117,105
Number of Sequences: 27780
Number of extensions: 357771
Number of successful extensions: 900
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)