Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C09
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    25   0.91 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    25   0.91 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    25   0.91 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.8  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   4.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.4  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    21   8.4  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 649 FNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEXV 771
           +N T  +P+   +    S    E  Y Y GS  TPP  + V
Sbjct: 23  YNYTSDIPNAQQMPPHYSNYHYEDPYGYTGSEETPPSPQEV 63


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 649 FNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEXV 771
           +N T  +P+   +    S    E  Y Y GS  TPP  + V
Sbjct: 23  YNYTSDIPNAQQMPPHYSNYHYEDPYGYTGSEETPPSPQEV 63


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 649 FNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEXV 771
           +N T  +P+   +    S    E  Y Y GS  TPP  + V
Sbjct: 23  YNYTSDIPNAQQMPPHYSNYHYEDPYGYTGSEETPPSPQEV 63


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 542 IASAVFLYFLFLWMMCISKGRRISFNVCSDPLLFL 438
           I  AV LYF  L    +  G+  SFN  +  L+F+
Sbjct: 51  ILFAVLLYFASLEKNPLFDGQLYSFNTFAKLLIFV 85


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -3

Query: 469 SMCAPILCCSCHP 431
           ++C  ++C +CHP
Sbjct: 4   AICFALMCIACHP 16


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 479 VFLWKCTSSIGIRNTETPRKLCSTLMAYV 565
           +FL  C S + I + E  RK C  L  ++
Sbjct: 17  LFLLICDSYLKIYHKEKYRKFCRILKYFI 45


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 559 LCVLAFFYQVVEFDAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTERFY 726
           +C+L  + ++ E   + L  I ++      FN TLQ+ +   L  +L  L+T R Y
Sbjct: 9   ICILGVYPEIQEKVYQELRDIFQDSDRPITFNDTLQMKY---LERVL--LETLRMY 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,967
Number of Sequences: 336
Number of extensions: 4569
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)