Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C07
         (504 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   5.9  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   7.8  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   7.8  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   7.8  
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    23   7.8  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 438 EENQGCGWCLCTICV 482
           EE  G G C+C +CV
Sbjct: 558 EECSGRGQCVCGVCV 572


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 333 RHQYCQSWILQVARQRQTPQTTCHSKS 413
           RH   ++W+    R + TPQ+   S++
Sbjct: 224 RHLERKAWVASFGRPKMTPQSLLASQT 250


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 139 AGGEHHHRINMDKYHPGYFG 198
           A   HHH  +   +HPG  G
Sbjct: 153 AAAMHHHHHHPHHHHPGLTG 172


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 181 HPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKV 330
           HP     +  R+    K++NF   + L  L+TL     RL Y +A + ++
Sbjct: 264 HPNGRNGILRRSSMSMKDRNFFINITLFALFTLSLRYDRLLYRTAGENRM 313


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 152 CSPPALPRPPGCLRCFPI 99
           C+PP +P  P C    P+
Sbjct: 38  CNPPGIPGGPACAGLKPM 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,766
Number of Sequences: 2352
Number of extensions: 8886
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)