Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C07
         (504 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...   147   2e-35
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...   147   2e-35
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...   147   2e-35
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...   146   3e-35
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...   141   1e-33
AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a ...   126   6e-29
AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a ...    46   1e-04
AK126225-1|BAC86496.1|  139|Homo sapiens protein ( Homo sapiens ...    29   9.2  

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  147 bits (356), Expect = 2e-35
 Identities = 69/148 (46%), Positives = 86/148 (58%)
 Frame = +1

Query: 37  MATSKKXPXKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
           M +  +   KLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 217 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 396
           +H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQ
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120

Query: 397 PVIVXXXXXXXXXXXXXXDVGGACVLSA 480
           PVIV               VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  147 bits (356), Expect = 2e-35
 Identities = 69/148 (46%), Positives = 86/148 (58%)
 Frame = +1

Query: 37  MATSKKXPXKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
           M +  +   KLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 217 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 396
           +H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQ
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120

Query: 397 PVIVXXXXXXXXXXXXXXDVGGACVLSA 480
           PVIV               VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score =  147 bits (356), Expect = 2e-35
 Identities = 69/148 (46%), Positives = 86/148 (58%)
 Frame = +1

Query: 37  MATSKKXPXKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
           M +  +   KLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 217 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 396
           +H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQ
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120

Query: 397 PVIVXXXXXXXXXXXXXXDVGGACVLSA 480
           PVIV               VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score =  146 bits (355), Expect = 3e-35
 Identities = 68/139 (48%), Positives = 83/139 (59%)
 Frame = +1

Query: 64  KLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNF 243
           KLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++N++F
Sbjct: 9   KLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQSF 68

Query: 244 CPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXX 423
           CP +NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQPVIV     
Sbjct: 69  CPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFF 128

Query: 424 XXXXXXXXXDVGGACVLSA 480
                     VGGACVL A
Sbjct: 129 SRRAEEKIKSVGGACVLVA 147


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  141 bits (341), Expect = 1e-33
 Identities = 67/148 (45%), Positives = 85/148 (57%)
 Frame = +1

Query: 37  MATSKKXPXKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
           M +  +   KLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 217 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 396
           ++ ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++            KQ
Sbjct: 61  YNLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLAKQ 120

Query: 397 PVIVXXXXXXXXXXXXXXDVGGACVLSA 480
           PVIV               VGGACVL A
Sbjct: 121 PVIVKAKLFSRRAEEKIKSVGGACVLVA 148


>AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a
           protein.
          Length = 106

 Score =  126 bits (303), Expect = 6e-29
 Identities = 54/106 (50%), Positives = 71/106 (66%)
 Frame = +1

Query: 37  MATSKKXPXKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
           M +  +   KLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 217 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 354
           +H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106


>AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a
           protein.
          Length = 34

 Score = 45.6 bits (103), Expect = 1e-04
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = +1

Query: 253 LNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 354
           +NLDKLWTLVSEQTR+  A    G  P+I++V++
Sbjct: 1   VNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 34


>AK126225-1|BAC86496.1|  139|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44237 fis, clone THYMU3007845. ).
          Length = 139

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 12/43 (27%), Positives = 15/43 (34%)
 Frame = +3

Query: 351 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGCGWCLCTIC 479
           +W L      Q PQ        + L   R   + C WC C  C
Sbjct: 71  AWFLSPVHHSQIPQLAACPLQSLRLSKPRSPGRCCAWCGCLNC 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,391,458
Number of Sequences: 237096
Number of extensions: 1413363
Number of successful extensions: 3067
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3066
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)