Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C06
         (624 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.3  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.3  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   8.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 265  GEVQIHRLHWQKV 303
            G++Q  ++HWQK+
Sbjct: 1346 GQLQASQIHWQKI 1358


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 268 HLYYYLMLANPDGYS 224
           HLY+  +L +P GYS
Sbjct: 116 HLYHPQVLLSPGGYS 130


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -3

Query: 586 FVKILRHHHINYIQWHFARCQFVSPIQYKKCRYT 485
           F+   +HH    +++H        P Q  KC YT
Sbjct: 238 FITEYKHH----LEYHLRNHAGSKPFQCNKCDYT 267


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 518 YELTSCKVPLNIIYMMMPQYFYKK 589
           Y L  C +    IY+  P+Y+ +K
Sbjct: 219 YRLLRCWLISKCIYVFNPRYYLEK 242


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 476 ILLSIAAFLVLYGRYELTSCKVPLNIIYMMMPQYFY 583
           IL +I  FL++  ++E+T     +N +       FY
Sbjct: 335 ILDAIVTFLIVMIQFEMTQNSTNINFVSTFFKIPFY 370


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 518 YELTSCKVPLNIIYMMMPQYFYKK 589
           Y L  C +    IY+  P+Y+ +K
Sbjct: 219 YRLLRCWLISKCIYVFNPRYYLEK 242


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = -3

Query: 565 HHINYIQWHFARCQFVSPIQYKKCRYT 485
           HH+ Y   H        P Q  KC YT
Sbjct: 2   HHLEY---HLRNHAGSKPFQCNKCDYT 25


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +1

Query: 304 WSLPPPKENGCVQAMAWRPDGKALAIGYNL 393
           W++P     G +  M W P  +    G NL
Sbjct: 441 WNMPSTSVVGDMLNMNWNPSAQNDLSGVNL 470


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,217
Number of Sequences: 336
Number of extensions: 2937
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)