BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_F_C06 (624 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_0997 + 33382756-33382861,33383070-33383161,33383936-333841... 60 1e-09 03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813... 31 0.56 04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865... 31 0.74 10_08_0704 - 20018477-20018542,20018693-20018704,20018731-200189... 29 3.0 08_01_0751 + 7095707-7095846,7095944-7096009,7096236-7096296 29 3.0 08_01_0739 + 6798592-6798731,6798829-6798894,6799121-6799181 29 3.0 07_03_1692 - 28733184-28733980,28734306-28734373,28734481-287345... 29 4.0 04_04_0815 - 28269918-28270022,28270164-28270226,28270342-282704... 29 4.0 11_06_0627 + 25633537-25633884,25635246-25635869 28 5.2 07_03_0906 + 22481456-22481802,22482105-22482186,22482299-224824... 28 5.2 06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771... 28 6.9 02_05_0420 + 28821717-28821854,28821944-28822210,28822299-288225... 28 6.9 >02_05_0997 + 33382756-33382861,33383070-33383161,33383936-33384175, 33384820-33384900,33384974-33385113,33385462-33385622, 33385700-33385800,33385895-33385969,33386218-33386488, 33386657-33386697,33386922-33387004,33387100-33387189, 33387721-33387825,33388023-33388161,33388467-33388670, 33388837-33388908,33389189-33389273,33389374-33389480 Length = 730 Score = 60.5 bits (140), Expect = 1e-09 Identities = 24/66 (36%), Positives = 41/66 (62%) Frame = +1 Query: 223 WSNRLDLLALSNNKGEVQIHRLHWQKVWSLPPPKENGCVQAMAWRPDGKALAIGYNLGII 402 W+ DLLA+ + +V +HR +WQ++W++ P K C+ ++ W PDGK +A+G G++ Sbjct: 4 WNPEKDLLAMVTDDSKVVLHRFNWQRLWTISPGK---CITSICWSPDGKIVALGTEDGLV 60 Query: 403 YTVSVE 420 VE Sbjct: 61 LLHDVE 66 >03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477, 8136560-8136655,8136746-8136874,8136947-8137123, 8137256-8137366,8138592-8138792,8139022-8139186, 8139293-8139527,8139618-8139745,8139833-8139928, 8140017-8140112,8140252-8140325,8140393-8140462, 8140556-8140665,8140753-8140906,8141040-8141155, 8141259-8141379,8141464-8141641,8142331-8142489, 8142619-8142732,8142821-8143000,8143098-8143177 Length = 1117 Score = 31.5 bits (68), Expect = 0.56 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +1 Query: 202 YQVDLMVWSNRLDLLALSNNKGEVQI-HRLHWQKVWSLPPPKENGCVQAMAWRPDG 366 Y V + + + AL G V + L ++ W PPP ENG A++ P+G Sbjct: 1053 YPVVVAAHPSEANQFALGLTDGGVYVLEPLESERKWGNPPPAENGSTSALSTPPNG 1108 >04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512, 30286718-30287042,30287563-30287818,30287901-30288117, 30288743-30289095,30289330-30289833,30291267-30292467, 30292614-30292970,30293258-30293495,30294083-30295125, 30295234-30296649,30296731-30296855,30297036-30297314, 30297352-30297382,30298957-30299022,30299447-30299689, 30299848-30299898,30299980-30300071,30300182-30300249, 30300515-30300600,30300720-30300824,30300994-30301127, 30302403-30302436,30302620-30302892,30303019-30303288, 30303384-30303974,30304065-30304214 Length = 3376 Score = 31.1 bits (67), Expect = 0.74 Identities = 10/23 (43%), Positives = 18/23 (78%) Frame = +1 Query: 322 KENGCVQAMAWRPDGKALAIGYN 390 ++NG V +++W PDG+ +A+G N Sbjct: 3094 EDNGPVTSVSWAPDGRHIAVGLN 3116 >10_08_0704 - 20018477-20018542,20018693-20018704,20018731-20018927, 20018928-20018999,20019159-20021289 Length = 825 Score = 29.1 bits (62), Expect = 3.0 Identities = 14/40 (35%), Positives = 25/40 (62%) Frame = +3 Query: 270 SPNT*IALAKSMELTTSKRKWLCTSDGLET*WKGSSYWIQ 389 +PNT ++ +++E + S WL SDG++T WKG + + Sbjct: 661 NPNT-LSAQETLEWS-SYINWLLYSDGIDTIWKGQEQFFE 698 >08_01_0751 + 7095707-7095846,7095944-7096009,7096236-7096296 Length = 88 Score = 29.1 bits (62), Expect = 3.0 Identities = 9/30 (30%), Positives = 15/30 (50%) Frame = +1 Query: 292 WQKVWSLPPPKENGCVQAMAWRPDGKALAI 381 W W+ P + G + +WRP G+ L + Sbjct: 43 WTTAWAKPAMERPGWISRQSWRPGGQRLRL 72 >08_01_0739 + 6798592-6798731,6798829-6798894,6799121-6799181 Length = 88 Score = 29.1 bits (62), Expect = 3.0 Identities = 9/30 (30%), Positives = 15/30 (50%) Frame = +1 Query: 292 WQKVWSLPPPKENGCVQAMAWRPDGKALAI 381 W W+ P + G + +WRP G+ L + Sbjct: 43 WTTAWAKPAMERPGWISRQSWRPGGQRLRL 72 >07_03_1692 - 28733184-28733980,28734306-28734373,28734481-28734594, 28734835-28734884,28735012-28735422,28735534-28735610, 28736083-28736257,28736843-28736939,28737070-28737833, 28737900-28738001,28738093-28738174,28739004-28739161 Length = 964 Score = 28.7 bits (61), Expect = 4.0 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -2 Query: 359 GLQAIACTQPFSFGGGKLHTFCQCNLCI 276 G I C QP S G K + C CN+C+ Sbjct: 754 GCTCIVCIQPPSGKGPKHNPACTCNVCM 781 >04_04_0815 - 28269918-28270022,28270164-28270226,28270342-28270460, 28270586-28270684,28270761-28270953,28271024-28271117, 28271339-28271394,28272372-28272431,28272877-28272989, 28273286-28273343,28273429-28273521,28273659-28273904, 28274990-28275371,28275523-28275595,28275692-28275795, 28275872-28275963,28275996-28276106,28276225-28276309, 28276385-28276518,28278264-28278302 Length = 772 Score = 28.7 bits (61), Expect = 4.0 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +1 Query: 322 KENGCVQAMAWRPDGKALAIGYNLGIIYTVSVEDKGII 435 K G V +++ + K +A+G GI+ VS+ED I+ Sbjct: 485 KLKGAVTSISLISNSKRVAVGTEKGIVSVVSIEDASIL 522 >11_06_0627 + 25633537-25633884,25635246-25635869 Length = 323 Score = 28.3 bits (60), Expect = 5.2 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 11/65 (16%) Frame = +1 Query: 241 LLALSNNKGEVQIHRLH-WQKVWSLPPPKENGC----------VQAMAWRPDGKALAIGY 387 L A G V++ W+ + SL P+ G V ++AW PDGK LA G Sbjct: 120 LAAAGGGSGSVKLWDTEKWKPITSLAVPRPEGARPDKTGSGKFVLSVAWSPDGKLLACGS 179 Query: 388 NLGII 402 G I Sbjct: 180 MDGTI 184 >07_03_0906 + 22481456-22481802,22482105-22482186,22482299-22482400, 22483005-22483315,22483948-22484044,22484522-22484696, 22485074-22485150,22485632-22486027,22486254-22486303, 22487315-22487382,22488142-22488701 Length = 754 Score = 28.3 bits (60), Expect = 5.2 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -2 Query: 359 GLQAIACTQPFSFGGGKLHTFCQCNLCI 276 G I C QP S G K C CN+C+ Sbjct: 618 GCSCIVCIQPPSGKGPKHKQTCTCNVCM 645 >06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501, 7711977-7712072,7712995-7713892,7713983-7714093, 7714657-7714751 Length = 825 Score = 27.9 bits (59), Expect = 6.9 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +1 Query: 268 EVQIHRLHWQKVWSLPPPKE 327 E+Q + LH + +W PPPKE Sbjct: 397 EIQDYLLHLKGLWLCPPPKE 416 >02_05_0420 + 28821717-28821854,28821944-28822210,28822299-28822568, 28822656-28823246,28823336-28823479 Length = 469 Score = 27.9 bits (59), Expect = 6.9 Identities = 8/23 (34%), Positives = 18/23 (78%) Frame = +1 Query: 322 KENGCVQAMAWRPDGKALAIGYN 390 +++G + +++W PDG+ +A+G N Sbjct: 189 EDSGPITSVSWAPDGQHVAVGLN 211 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,288,769 Number of Sequences: 37544 Number of extensions: 292573 Number of successful extensions: 672 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 649 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 671 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1513903616 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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