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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C06
         (624 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0997 + 33382756-33382861,33383070-33383161,33383936-333841...    60   1e-09
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813...    31   0.56 
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865...    31   0.74 
10_08_0704 - 20018477-20018542,20018693-20018704,20018731-200189...    29   3.0  
08_01_0751 + 7095707-7095846,7095944-7096009,7096236-7096296           29   3.0  
08_01_0739 + 6798592-6798731,6798829-6798894,6799121-6799181           29   3.0  
07_03_1692 - 28733184-28733980,28734306-28734373,28734481-287345...    29   4.0  
04_04_0815 - 28269918-28270022,28270164-28270226,28270342-282704...    29   4.0  
11_06_0627 + 25633537-25633884,25635246-25635869                       28   5.2  
07_03_0906 + 22481456-22481802,22482105-22482186,22482299-224824...    28   5.2  
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771...    28   6.9  
02_05_0420 + 28821717-28821854,28821944-28822210,28822299-288225...    28   6.9  

>02_05_0997 +
           33382756-33382861,33383070-33383161,33383936-33384175,
           33384820-33384900,33384974-33385113,33385462-33385622,
           33385700-33385800,33385895-33385969,33386218-33386488,
           33386657-33386697,33386922-33387004,33387100-33387189,
           33387721-33387825,33388023-33388161,33388467-33388670,
           33388837-33388908,33389189-33389273,33389374-33389480
          Length = 730

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 24/66 (36%), Positives = 41/66 (62%)
 Frame = +1

Query: 223 WSNRLDLLALSNNKGEVQIHRLHWQKVWSLPPPKENGCVQAMAWRPDGKALAIGYNLGII 402
           W+   DLLA+  +  +V +HR +WQ++W++ P K   C+ ++ W PDGK +A+G   G++
Sbjct: 4   WNPEKDLLAMVTDDSKVVLHRFNWQRLWTISPGK---CITSICWSPDGKIVALGTEDGLV 60

Query: 403 YTVSVE 420
               VE
Sbjct: 61  LLHDVE 66


>03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,
            8136560-8136655,8136746-8136874,8136947-8137123,
            8137256-8137366,8138592-8138792,8139022-8139186,
            8139293-8139527,8139618-8139745,8139833-8139928,
            8140017-8140112,8140252-8140325,8140393-8140462,
            8140556-8140665,8140753-8140906,8141040-8141155,
            8141259-8141379,8141464-8141641,8142331-8142489,
            8142619-8142732,8142821-8143000,8143098-8143177
          Length = 1117

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 202  YQVDLMVWSNRLDLLALSNNKGEVQI-HRLHWQKVWSLPPPKENGCVQAMAWRPDG 366
            Y V +    +  +  AL    G V +   L  ++ W  PPP ENG   A++  P+G
Sbjct: 1053 YPVVVAAHPSEANQFALGLTDGGVYVLEPLESERKWGNPPPAENGSTSALSTPPNG 1108


>04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512,
            30286718-30287042,30287563-30287818,30287901-30288117,
            30288743-30289095,30289330-30289833,30291267-30292467,
            30292614-30292970,30293258-30293495,30294083-30295125,
            30295234-30296649,30296731-30296855,30297036-30297314,
            30297352-30297382,30298957-30299022,30299447-30299689,
            30299848-30299898,30299980-30300071,30300182-30300249,
            30300515-30300600,30300720-30300824,30300994-30301127,
            30302403-30302436,30302620-30302892,30303019-30303288,
            30303384-30303974,30304065-30304214
          Length = 3376

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +1

Query: 322  KENGCVQAMAWRPDGKALAIGYN 390
            ++NG V +++W PDG+ +A+G N
Sbjct: 3094 EDNGPVTSVSWAPDGRHIAVGLN 3116


>10_08_0704 -
           20018477-20018542,20018693-20018704,20018731-20018927,
           20018928-20018999,20019159-20021289
          Length = 825

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +3

Query: 270 SPNT*IALAKSMELTTSKRKWLCTSDGLET*WKGSSYWIQ 389
           +PNT ++  +++E + S   WL  SDG++T WKG   + +
Sbjct: 661 NPNT-LSAQETLEWS-SYINWLLYSDGIDTIWKGQEQFFE 698


>08_01_0751 + 7095707-7095846,7095944-7096009,7096236-7096296
          Length = 88

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 292 WQKVWSLPPPKENGCVQAMAWRPDGKALAI 381
           W   W+ P  +  G +   +WRP G+ L +
Sbjct: 43  WTTAWAKPAMERPGWISRQSWRPGGQRLRL 72


>08_01_0739 + 6798592-6798731,6798829-6798894,6799121-6799181
          Length = 88

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 292 WQKVWSLPPPKENGCVQAMAWRPDGKALAI 381
           W   W+ P  +  G +   +WRP G+ L +
Sbjct: 43  WTTAWAKPAMERPGWISRQSWRPGGQRLRL 72


>07_03_1692 -
           28733184-28733980,28734306-28734373,28734481-28734594,
           28734835-28734884,28735012-28735422,28735534-28735610,
           28736083-28736257,28736843-28736939,28737070-28737833,
           28737900-28738001,28738093-28738174,28739004-28739161
          Length = 964

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 359 GLQAIACTQPFSFGGGKLHTFCQCNLCI 276
           G   I C QP S  G K +  C CN+C+
Sbjct: 754 GCTCIVCIQPPSGKGPKHNPACTCNVCM 781


>04_04_0815 -
           28269918-28270022,28270164-28270226,28270342-28270460,
           28270586-28270684,28270761-28270953,28271024-28271117,
           28271339-28271394,28272372-28272431,28272877-28272989,
           28273286-28273343,28273429-28273521,28273659-28273904,
           28274990-28275371,28275523-28275595,28275692-28275795,
           28275872-28275963,28275996-28276106,28276225-28276309,
           28276385-28276518,28278264-28278302
          Length = 772

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 322 KENGCVQAMAWRPDGKALAIGYNLGIIYTVSVEDKGII 435
           K  G V +++   + K +A+G   GI+  VS+ED  I+
Sbjct: 485 KLKGAVTSISLISNSKRVAVGTEKGIVSVVSIEDASIL 522


>11_06_0627 + 25633537-25633884,25635246-25635869
          Length = 323

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
 Frame = +1

Query: 241 LLALSNNKGEVQIHRLH-WQKVWSLPPPKENGC----------VQAMAWRPDGKALAIGY 387
           L A     G V++     W+ + SL  P+  G           V ++AW PDGK LA G 
Sbjct: 120 LAAAGGGSGSVKLWDTEKWKPITSLAVPRPEGARPDKTGSGKFVLSVAWSPDGKLLACGS 179

Query: 388 NLGII 402
             G I
Sbjct: 180 MDGTI 184


>07_03_0906 +
           22481456-22481802,22482105-22482186,22482299-22482400,
           22483005-22483315,22483948-22484044,22484522-22484696,
           22485074-22485150,22485632-22486027,22486254-22486303,
           22487315-22487382,22488142-22488701
          Length = 754

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 359 GLQAIACTQPFSFGGGKLHTFCQCNLCI 276
           G   I C QP S  G K    C CN+C+
Sbjct: 618 GCSCIVCIQPPSGKGPKHKQTCTCNVCM 645


>06_01_0993 +
           7710016-7710977,7711081-7711316,7711422-7711501,
           7711977-7712072,7712995-7713892,7713983-7714093,
           7714657-7714751
          Length = 825

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 268 EVQIHRLHWQKVWSLPPPKE 327
           E+Q + LH + +W  PPPKE
Sbjct: 397 EIQDYLLHLKGLWLCPPPKE 416


>02_05_0420 +
           28821717-28821854,28821944-28822210,28822299-28822568,
           28822656-28823246,28823336-28823479
          Length = 469

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = +1

Query: 322 KENGCVQAMAWRPDGKALAIGYN 390
           +++G + +++W PDG+ +A+G N
Sbjct: 189 EDSGPITSVSWAPDGQHVAVGLN 211


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,288,769
Number of Sequences: 37544
Number of extensions: 292573
Number of successful extensions: 672
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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