Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C06
         (624 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061618-1|AAL29166.1|  775|Drosophila melanogaster SD08238p pro...    75   6e-14
AE014298-1265|AAF46439.1|  775|Drosophila melanogaster CG32707-P...    75   6e-14
AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p pro...    33   0.41 
AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA ...    33   0.41 
AE013599-2913|AAF57545.1| 1366|Drosophila melanogaster CG11237-P...    31   0.96 
AE014296-2182|AAF49887.2| 3892|Drosophila melanogaster CG32113-P...    29   6.8  

>AY061618-1|AAL29166.1|  775|Drosophila melanogaster SD08238p
           protein.
          Length = 775

 Score = 75.4 bits (177), Expect = 6e-14
 Identities = 34/88 (38%), Positives = 56/88 (63%)
 Frame = +1

Query: 172 MRQVGXRHVPYQVDLMVWSNRLDLLALSNNKGEVQIHRLHWQKVWSLPPPKENGCVQAMA 351
           M+ +G R++   V+ M W+N++DL+A    KGEV I RL+WQK+ + P P E+  V++++
Sbjct: 7   MKLLGARNMSCIVERMEWNNKMDLIAYGTEKGEVVIQRLNWQKIVTFPTPGEDVRVRSLS 66

Query: 352 WRPDGKALAIGYNLGIIYTVSVEDKGII 435
           W+ D   LA+GY+ G +  +  E   II
Sbjct: 67  WQMDETLLAVGYSNGKVALLDAESGTII 94


>AE014298-1265|AAF46439.1|  775|Drosophila melanogaster CG32707-PA
           protein.
          Length = 775

 Score = 75.4 bits (177), Expect = 6e-14
 Identities = 34/88 (38%), Positives = 56/88 (63%)
 Frame = +1

Query: 172 MRQVGXRHVPYQVDLMVWSNRLDLLALSNNKGEVQIHRLHWQKVWSLPPPKENGCVQAMA 351
           M+ +G R++   V+ M W+N++DL+A    KGEV I RL+WQK+ + P P E+  V++++
Sbjct: 7   MKLLGARNMSCIVERMEWNNKMDLIAYGTEKGEVVIQRLNWQKIVTFPTPGEDVRVRSLS 66

Query: 352 WRPDGKALAIGYNLGIIYTVSVEDKGII 435
           W+ D   LA+GY+ G +  +  E   II
Sbjct: 67  WQMDETLLAVGYSNGKVALLDAESGTII 94


>AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p
           protein.
          Length = 1205

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +1

Query: 208 VDLMVWSNRLDLLALSNNKGEVQIHRLHWQKVW--SLPPPKENGCVQAMAWRPDGKALAI 381
           V ++ W++    L  S+  G + +  L+ +  W   +   ++   V +M+W  DG  + I
Sbjct: 75  VRVVTWNDAQQKLTSSDTDGVIMVWMLY-KGSWYEEMTNDRKKSTVASMSWTSDGSRICI 133

Query: 382 GYNLGIIYTVSVEDKGIIDK 441
            Y  G I   SV+   I  K
Sbjct: 134 VYEDGAIIVGSVDGNRIFGK 153


>AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA
           protein.
          Length = 1205

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +1

Query: 208 VDLMVWSNRLDLLALSNNKGEVQIHRLHWQKVW--SLPPPKENGCVQAMAWRPDGKALAI 381
           V ++ W++    L  S+  G + +  L+ +  W   +   ++   V +M+W  DG  + I
Sbjct: 75  VRVVTWNDAQQKLTSSDTDGVIMVWMLY-KGSWYEEMTNDRKKSTVASMSWTSDGSRICI 133

Query: 382 GYNLGIIYTVSVEDKGIIDK 441
            Y  G I   SV+   I  K
Sbjct: 134 VYEDGAIIVGSVDGNRIFGK 153


>AE013599-2913|AAF57545.1| 1366|Drosophila melanogaster CG11237-PA
           protein.
          Length = 1366

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +1

Query: 235 LDLLALSNNKGEVQIHRL-HWQKVWSLPPPKENGCVQAMAWRPDGKALAIGYNLGIIY 405
           LD++A S     ++IH + + Q+   +    ++  VQ + W PDG+ LA+  N G +Y
Sbjct: 286 LDIVA-SCGDDSIKIHSITNLQETERIITVPDHAGVQMIDWSPDGQLLAVTTNHGTVY 342


>AE014296-2182|AAF49887.2| 3892|Drosophila melanogaster CG32113-PA
            protein.
          Length = 3892

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = -3

Query: 598  TLELFVKILRHHHINYIQWHFA 533
            T++++ K L+ H+IN ++WH A
Sbjct: 3551 TMDVYRKELKKHYINQVKWHAA 3572


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,523,301
Number of Sequences: 53049
Number of extensions: 497698
Number of successful extensions: 1091
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)