Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_C05
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 262 2e-70
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 42 3e-04
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 38 0.008
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 37 0.013
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 37 0.013
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 36 0.018
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical pr... 28 6.2
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 28 6.2
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 262 bits (641), Expect = 2e-70
Identities = 119/168 (70%), Positives = 146/168 (86%), Gaps = 1/168 (0%)
Frame = +1
Query: 121 FGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTVGD 300
+G+V+ VSGPVVTAEKM+GSAMYELVRVG+ ELVGEIIRLEGD ATIQVYEETSGVT+GD
Sbjct: 7 YGFVYGVSGPVVTAEKMAGSAMYELVRVGHQELVGEIIRLEGDYATIQVYEETSGVTIGD 66
Query: 301 PVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWEF-N 477
PVLRTGKPLSVELGPGI+GSIFDGIQRPLKDI ++TQSIYIPKG++ +L+RE W+F
Sbjct: 67 PVLRTGKPLSVELGPGIMGSIFDGIQRPLKDIADITQSIYIPKGVSTNALSREARWDFVV 126
Query: 478 PLNVKVGSHITGGDLYGIVHXNTLVKHRMLVPPKAKGTVTYIXPAGNY 621
+++VG H+TGGD+ G V N L+KH++L+PP A GT+T++ P+G Y
Sbjct: 127 SKDLRVGGHVTGGDIIGTVDENLLIKHKILLPPSACGTITFVAPSGQY 174
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +1
Query: 130 VFAVSGPVVTAEKMSGSAMYELVRVGY---NELVGEIIRLEGDMATIQVYEETSGVTVGD 300
V V+GP+V + E+V++ ++ G+++ + + A +QV+E TSG+ +
Sbjct: 32 VCGVNGPLVILNDVKFPQFSEIVKITLPDGSKRSGQVLEISKNKAVVQVFEGTSGIDAKN 91
Query: 301 PVLR-TGKPLSVELGPGILGSIFDGIQRPL 387
+ TG L + +LG IF+G +P+
Sbjct: 92 TICEFTGDILRTPVSEDMLGRIFNGSGKPI 121
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +1
Query: 130 VFAVSGPVVTAEKMSGSAMYELVRVGYNE---LVGEIIRLEGDMATIQVYEETSGVTVGD 300
VF V+GP+V + E+V++ +G+++ + A +QV+E T+GV
Sbjct: 44 VFGVNGPLVIVHNVKFPMFNEIVKITLPNGQIRMGQVLESSKNKAVVQVFEGTTGVDAKF 103
Query: 301 PVLR-TGKPLSVELGPGILGSIFDGIQRPL 387
TG + +LG IF+G +P+
Sbjct: 104 TTCEFTGDIFRSPVSLDMLGRIFNGSGKPI 133
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 36.7 bits (81), Expect = 0.013
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = +1
Query: 115 ERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTV 294
E G V ++ + + E+V + + G + L+ D + V+ +
Sbjct: 27 EETGKVLSIGDGIARVYGLKNIQAEEMVEFD-SGIKGMAMNLDVDNVGVVVFGNDKVIRE 85
Query: 295 GDPVLRTGKPLSVELGPGILGSIFDGIQRPL 387
GD V RTG + V +G G+LG + D + P+
Sbjct: 86 GDIVKRTGAIVDVPVGDGLLGRVVDALGNPI 116
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 36.7 bits (81), Expect = 0.013
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = +1
Query: 115 ERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTV 294
E G V ++ + + E+V + + G + L+ D + V+ +
Sbjct: 54 EETGKVLSIGDGIARVYGLKNIQAEEMVEFD-SGIKGMAMNLDVDNVGVVVFGNDKVIRE 112
Query: 295 GDPVLRTGKPLSVELGPGILGSIFDGIQRPL 387
GD V RTG + V +G G+LG + D + P+
Sbjct: 113 GDIVKRTGAIVDVPVGDGLLGRVVDALGNPI 143
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 36.3 bits (80), Expect = 0.018
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
Frame = +1
Query: 124 GYVFAVSGPVVTAE--KMSGSAMYELVRVGYN-ELVGEIIRLEGD-MATIQVYEETSGVT 291
G + AV G VV + + + L VG + L+ E+ + GD + + T G+
Sbjct: 70 GRIVAVIGAVVDVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLV 129
Query: 292 VGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAR-EVDW 468
G PV TG P+ + +GP LG I + I P+ + + + P V+
Sbjct: 130 RGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQ 189
Query: 469 EFNPLNVKV 495
E +KV
Sbjct: 190 EILVTGIKV 198
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 368 SKMEPKIPGPSSTDKGFPVRSTGSPTVTPEVSSYTWMV 255
+ +E IP PS D S GS TPE S++ W +
Sbjct: 307 NNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAFVWTI 344
>Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical
protein F28B1.3 protein.
Length = 802
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = -1
Query: 270 VYLD----GGHVTFKTDNLTDEFIVTDTDQLVHSRSGHF 166
VY+D G + + DN T EF+ DTD V H+
Sbjct: 283 VYMDRVSTDGRLKYLIDNCTSEFVCGDTDTFVVFNMNHY 321
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 368 SKMEPKIPGPSSTDKGFPVRSTGSPTVTPEVSSYTWMV 255
+ +E IP PS D S GS TPE S++ W +
Sbjct: 307 NNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAFVWTI 344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,663,820
Number of Sequences: 27780
Number of extensions: 309917
Number of successful extensions: 832
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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