Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C04
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M32790-1|AAA52035.1|  109|Homo sapiens COL1A1 protein.                 31   2.5  
AB209432-1|BAD92669.1|  526|Homo sapiens Ariadne-1 protein homol...    31   3.3  
Y11072-1|CAA71955.1|  685|Homo sapiens synaptopodin protein.           30   7.5  
BC146665-1|AAI46666.1|  685|Homo sapiens synaptopodin protein.         30   7.5  
BC142683-1|AAI42684.1|  685|Homo sapiens SYNPO protein protein.        30   7.5  
AF499137-1|AAQ07403.1|  903|Homo sapiens synaptopodin protein.         30   7.5  
AF499136-1|AAQ07402.1|  903|Homo sapiens synaptopodin protein.         30   7.5  
AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.     30   7.5  

>M32790-1|AAA52035.1|  109|Homo sapiens COL1A1 protein.
          Length = 109

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 611 DCSYPSRRGRRWSCLLTAR*VSCARGPRRPRNFP 510
           D   P +R RRW CLL    +     P  P NFP
Sbjct: 7   DVGAPDQRLRRWPCLLPVNSLHPNLAPSHPTNFP 40


>AB209432-1|BAD92669.1|  526|Homo sapiens Ariadne-1 protein homolog
           variant protein.
          Length = 526

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = -2

Query: 536 GPRRPRNFPLYTSSPRRRWERRASKSAD-TTHVF-EPIEDSASLTRVL 399
           GPRRPR  P  ++S RR   RRA  S +   + F E I++ A++TR+L
Sbjct: 57  GPRRPRPLPA-SASVRRAPARRAMDSDEGYNYEFNEVIQNPATITRIL 103


>Y11072-1|CAA71955.1|  685|Homo sapiens synaptopodin protein.
          Length = 685

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 591 QRQTMVLFTDSTMSELRSRTTPTSQFSSLHF 499
           Q  T+V+  D  MS   + TTPT  +S +HF
Sbjct: 197 QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227


>BC146665-1|AAI46666.1|  685|Homo sapiens synaptopodin protein.
          Length = 685

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 591 QRQTMVLFTDSTMSELRSRTTPTSQFSSLHF 499
           Q  T+V+  D  MS   + TTPT  +S +HF
Sbjct: 197 QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227


>BC142683-1|AAI42684.1|  685|Homo sapiens SYNPO protein protein.
          Length = 685

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 591 QRQTMVLFTDSTMSELRSRTTPTSQFSSLHF 499
           Q  T+V+  D  MS   + TTPT  +S +HF
Sbjct: 197 QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227


>AF499137-1|AAQ07403.1|  903|Homo sapiens synaptopodin protein.
          Length = 903

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 591 QRQTMVLFTDSTMSELRSRTTPTSQFSSLHF 499
           Q  T+V+  D  MS   + TTPT  +S +HF
Sbjct: 197 QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227


>AF499136-1|AAQ07402.1|  903|Homo sapiens synaptopodin protein.
          Length = 903

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 591 QRQTMVLFTDSTMSELRSRTTPTSQFSSLHF 499
           Q  T+V+  D  MS   + TTPT  +S +HF
Sbjct: 197 QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227


>AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.
          Length = 1015

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 591 QRQTMVLFTDSTMSELRSRTTPTSQFSSLHF 499
           Q  T+V+  D  MS   + TTPT  +S +HF
Sbjct: 309 QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 339


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,633,287
Number of Sequences: 237096
Number of extensions: 1614022
Number of successful extensions: 3197
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3197
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)