Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C03
         (407 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.1  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    20   8.1  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/43 (23%), Positives = 26/43 (60%)
 Frame = +1

Query: 151 LFMYSLSIINGYSV*CIVYMLTVIIIIYINSCSFVYYLYIFLI 279
           +F + + +++ Y+   I+ + +V+ I+ I+   +  +LY F+I
Sbjct: 104 VFFWVIILMSNYAFTRIILLKSVLEIVIIDIEIYSQFLYGFMI 146


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 151 LFMYSLSIINGYSV*CIVYMLTVI-IIIYINSCSFVYYLYIFLI 279
           +F   L ++ G S   I   + +I +I+     ++++ LYIFL+
Sbjct: 595 IFGLGLLLMFGVSFLLITQTIFIICVIVQSEQIAWLHLLYIFLV 638



 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 199 IVYMLTVIIIIYINSCSFVYYL 264
           +VY+ TV I   +N C F  ++
Sbjct: 729 LVYIATVWICTLMNRCKFSEFM 750


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 61   SMLFFCGSPNFIIA 20
            S+ FFC +  FIIA
Sbjct: 978  SLFFFCMAAEFIIA 991


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 61   SMLFFCGSPNFIIA 20
            S+ FFC +  FIIA
Sbjct: 978  SLFFFCMAAEFIIA 991


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 184 YSV*CIVYMLTVIIIIY 234
           YS+ C++ +LT I+  Y
Sbjct: 281 YSMYCLLILLTTIVASY 297


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 184 YSV*CIVYMLTVIIIIY 234
           YS+ C++ +LT I+  Y
Sbjct: 281 YSMYCLLILLTTIVASY 297


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 328 ITIKKLHYQLHFIHNDLSKKYINN 257
           +TI    Y  HFI +D SK  +N+
Sbjct: 251 VTIGIAFYGHHFILSDPSKHGLND 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,749
Number of Sequences: 336
Number of extensions: 1679
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)