Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_B24
(563 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.15
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 29 0.47
SPAC1952.15c |rec24|mug6|meiotic recombination protein Rec24|Sch... 28 0.82
SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|c... 28 1.1
SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr... 27 1.4
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 27 1.4
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 26 4.4
SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation... 26 4.4
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 25 5.8
SPBC36B7.07 |tlg1||SNARE Tgl1|Schizosaccharomyces pombe|chr 2|||... 25 5.8
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 25 7.7
SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosa... 25 7.7
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 25 7.7
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 25 7.7
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 25 7.7
SPAC21E11.07 ||SPAC2C4.01|glycine cleavage T-protein|Schizosacch... 25 7.7
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.7 bits (66), Expect = 0.15
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 346 TELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLES 465
T+ +K+ S E ENK LK +ID+ +N + S V+ + S
Sbjct: 388 TDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSS 427
Score = 27.9 bits (59), Expect = 1.1
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 328 LAGVPNTELSTKVISLENENKDLKKAID----DLRNLVISLQVRVETLESSSSITSDCIQ 495
LA L+T+++ L+N+ KDL D DLR L SL+ V +L+ I S+ ++
Sbjct: 1612 LAENERLSLTTRMLDLQNQVKDLSNIKDSLSEDLRTL-RSLEDSVASLQKECKIKSNTVE 1670
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 29.1 bits (62), Expect = 0.47
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = -1
Query: 176 FRSNQTFSCNKAAMLIIPKFRFELYL-----NTIKKLVH-TIKLNFYVNKVNRANLTA-V 18
FRSN + S IIP LYL +TI + H T ++ +N+VN L A V
Sbjct: 700 FRSNTSGSAKSEGYYIIPTTEKSLYLPLRNRSTIDTISHSTSRITSRMNRVNNRRLAAGV 759
Query: 17 QKS 9
+KS
Sbjct: 760 EKS 762
>SPAC1952.15c |rec24|mug6|meiotic recombination protein
Rec24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 350
Score = 28.3 bits (60), Expect = 0.82
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 94 VFKYNSNLNFGIISMAALLHEKVWLDRNVYNDAEKAYYESLSKV 225
+ + N+N G+IS A L V+L++ ++N A E L K+
Sbjct: 207 IMQNNANNGTGVISRAKFLEFYVFLEQLIFNKLSFASVEQLEKL 250
>SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 408
Score = 27.9 bits (59), Expect = 1.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 428 SSACKSVLKPWNHPAVSPLIVFKCSQKNLQQLLL 529
+ A S+ K N PA +PLIV S L++LLL
Sbjct: 73 TEAVLSIYKAKNRPADNPLIVHVASLDQLRRLLL 106
>SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 319
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 343 NTELSTKVISLENENKDLKKAIDDLRNLVISLQVR 447
NT+LS K+ ENE +DL + L++ ++ L+ R
Sbjct: 36 NTQLSIKIRESENEIQDLIQENFTLKSYLVKLEAR 70
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 310 MDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSS 474
M ++ ++G T + + +E+ENK L + D+RN V L+ + E S
Sbjct: 247 MQAIDDISGTIET-IKSDCYKVESENKGLINEVMDMRNFVQQLEQELYAFEDDYS 300
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 30 VCSINFIYVKIQFNCMNQLFYCI*IQFKSKFWNNQHGCFI 149
+C N +I NCM QL +F+ K WN FI
Sbjct: 1517 ICRDNITLSRIGTNCMQQLLSGNAYRFEVKDWNLVADMFI 1556
>SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation
specificity factor complex subunit
Pta1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 4.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 274 KARQHIKNSLECMDSVATLAGVPNTELSTKVIS 372
K Q + ++ C+D++ +L V N E+ VIS
Sbjct: 63 KFEQKLDLAVTCLDTIVSLYAVDNEEVKKDVIS 95
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 355 STKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSS 471
S ++ L+ EN+ L DLR I+L+ ++ET+++ +
Sbjct: 32 SIRIKELQLENERLLSENIDLRTTAINLEEQLETVQNEN 70
>SPBC36B7.07 |tlg1||SNARE Tgl1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 225
Score = 25.4 bits (53), Expect = 5.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 340 PNTELSTKVISLENENKDLKKAID 411
PNTEL+ + L KDLK A++
Sbjct: 37 PNTELTYAIDELSETLKDLKAAVE 60
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 25.0 bits (52), Expect = 7.7
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 373 LENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEKP 513
L N D+ K +D+L L ++ + SSS T CI +S +P
Sbjct: 161 LNTINLDIDKILDELDTTRSQLHSIIKLPDRSSSFTLQCIN-ESVRP 206
>SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 25.0 bits (52), Expect = 7.7
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 286 HIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNL 426
HI NS M + +PN ELST + E E +L K I + L
Sbjct: 26 HINNS--GMSELNKKLQLPNVELSTLSHTQEQEFNELNKLIRKINEL 70
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 25.0 bits (52), Expect = 7.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 295 NSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNL 426
NSL+ ++A L N EL + L+NE D KA D + L
Sbjct: 225 NSLKSYKAIAYLKKTFNEELQIRKNKLDNEEWD--KAFSDAKKL 266
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.0 bits (52), Expect = 7.7
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 265 EVAKARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQ 441
E+ + I + M SV EL ++ SLE NKD + LR+ + SL+
Sbjct: 1462 ELKALKDQINSEKAKMFSVQVQYEKREQELQKRIASLEKVNKDSLIDVRALRDRIASLE 1520
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 25.0 bits (52), Expect = 7.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 412 DLRNLVISLQVRVETLESSSSITSDCIQVQSEKPAAAST 528
DL++ ++SL SSSSIT++ P + ST
Sbjct: 214 DLKSSILSLYASPRPQVSSSSITTNATYQNLPSPVSTST 252
>SPAC21E11.07 ||SPAC2C4.01|glycine cleavage
T-protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 25.0 bits (52), Expect = 7.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 316 SVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITS 483
S ++A +P+ ELS KVI E LK + ++ S Q + + +S+ TS
Sbjct: 114 SRCSIAKIPSEELSIKVIWDVKEESRLKDTVAYAKDPRFSKQRLLRMIVPTSTCTS 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,077,397
Number of Sequences: 5004
Number of extensions: 38352
Number of successful extensions: 129
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 238029836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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