Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_B24
(563 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024805-5|AAK39339.1| 494|Caenorhabditis elegans Hypothetical ... 29 1.7
AC024805-4|ABA00170.1| 318|Caenorhabditis elegans Hypothetical ... 29 1.7
AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical ... 29 1.7
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical ... 28 4.0
AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical ... 28 4.0
AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical... 28 4.0
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 28 4.0
Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical p... 28 5.3
Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical p... 28 5.3
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 28 5.3
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 28 5.3
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical ... 27 9.3
>AC024805-5|AAK39339.1| 494|Caenorhabditis elegans Hypothetical
protein Y51H7C.6b protein.
Length = 494
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +1
Query: 334 GVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSE 507
G+ T L+ ++ +EN K L A+ ++ L ++ RV L+ + + C+Q+ +
Sbjct: 82 GLAVTRLNNHMLVVENSAKQLTSALKNISVLADTISGRVSALDVAKTRVVGCLQLAGD 139
>AC024805-4|ABA00170.1| 318|Caenorhabditis elegans Hypothetical
protein Y51H7C.6c protein.
Length = 318
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +1
Query: 334 GVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSE 507
G+ T L+ ++ +EN K L A+ ++ L ++ RV L+ + + C+Q+ +
Sbjct: 82 GLAVTRLNNHMLVVENSAKQLTSALKNISVLADTISGRVSALDVAKTRVVGCLQLAGD 139
>AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical
protein Y51H7C.6a protein.
Length = 801
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +1
Query: 334 GVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSE 507
G+ T L+ ++ +EN K L A+ ++ L ++ RV L+ + + C+Q+ +
Sbjct: 82 GLAVTRLNNHMLVVENSAKQLTSALKNISVLADTISGRVSALDVAKTRVVGCLQLAGD 139
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
protein C08H9.2 protein.
Length = 1220
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = +1
Query: 337 VPNTELSTKVISLENENKDLKKAIDDLRNLVISLQ 441
+PN E ++ I +E + + +KKA+ ++R +V ++
Sbjct: 454 IPNEETNSDEIVVEGKKEGVKKAVTEIRAIVTKIE 488
>AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical
protein F29G9.2b protein.
Length = 525
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +1
Query: 361 KVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDC 489
K++S+E + ++ +D+LR L + L + ++L S+++ DC
Sbjct: 200 KMVSIEEKLCTKEREVDELRQLCMYLDEQRQSLMSNAAANVDC 242
>AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical
protein F29G9.2a protein.
Length = 535
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +1
Query: 361 KVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDC 489
K++S+E + ++ +D+LR L + L + ++L S+++ DC
Sbjct: 210 KMVSIEEKLCTKEREVDELRQLCMYLDEQRQSLMSNAAANVDC 252
>AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical
protein Y73E7A.8 protein.
Length = 707
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/45 (22%), Positives = 26/45 (57%)
Frame = +1
Query: 322 ATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 456
A + G+ + + + + ++ + +L I+DLR+L+ + R+E+
Sbjct: 635 ARIFGIKTSSIPEETLKIQTKKSELTDEINDLRDLMEQMDERIES 679
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 KNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLES-S 468
K+ + D ++ +L +++ ++E+ NK+ KKAI DL N + L+ +E S S
Sbjct: 400 KDVTQARDQLSGQISELEIQLKSELKNVEHLNKEHKKAI-DLANEISKLKTEIERETSIS 458
Query: 469 SSITSDCIQVQSE 507
+ + Q+++E
Sbjct: 459 KQLEKEISQLRTE 471
>Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/65 (24%), Positives = 35/65 (53%)
Frame = +1
Query: 265 EVAKARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQV 444
++ KA+ +++ +L + + +E K+ +EN+ ++K +DDL+N I LQ
Sbjct: 285 DIRKAKDYLEQNLHVKQHMEKELAMVKSEQEEKI----SENEKVQKMVDDLKN-KIELQK 339
Query: 445 RVETL 459
++ L
Sbjct: 340 QIHGL 344
>Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/65 (24%), Positives = 35/65 (53%)
Frame = +1
Query: 265 EVAKARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQV 444
++ KA+ +++ +L + + +E K+ +EN+ ++K +DDL+N I LQ
Sbjct: 285 DIRKAKDYLEQNLHVKQHMEKELAMVKSEQEEKI----SENEKVQKMVDDLKN-KIELQK 339
Query: 445 RVETL 459
++ L
Sbjct: 340 QIHGL 344
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 355 STKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQV 498
S+K L EN+ LK ++DL+ V S +++ S D I V
Sbjct: 136 SSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISV 183
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 355 STKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQV 498
S+K L EN+ LK ++DL+ V S +++ S D I V
Sbjct: 136 SSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISV 183
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 370 SLENENKDLKKAIDDLRN 423
SLE N+D+KK IDD+++
Sbjct: 271 SLEKSNEDIKKEIDDMKS 288
>AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical
protein B0281.3 protein.
Length = 331
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 364 VISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSD 486
+ +EN L+KAI DL+ + + VE L+ + ++ ++
Sbjct: 163 ITRIENSGNSLQKAISDLQKKLRDIDQNVEELKKAQTLFNE 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,332,885
Number of Sequences: 27780
Number of extensions: 207560
Number of successful extensions: 646
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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