Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_B24
(563 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g27000.1 68414.m03292 bZIP family transcription factor 36 0.019
At2g22560.1 68415.m02674 kinase interacting protein-related simi... 34 0.075
At4g15545.1 68417.m02375 expressed protein 33 0.100
At1g50200.1 68414.m05629 aminoacyl-tRNA synthetase family protei... 31 0.53
At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR... 31 0.70
At3g19370.1 68416.m02457 expressed protein 29 1.6
At5g53570.1 68418.m06656 RabGAP/TBC domain-containing protein si... 29 2.1
At3g58840.1 68416.m06558 expressed protein 29 2.1
At3g57990.1 68416.m06463 expressed protein 29 2.8
At2g18260.1 68415.m02129 syntaxin-related protein, putative (SYP... 29 2.8
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 27 6.5
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 27 8.7
>At1g27000.1 68414.m03292 bZIP family transcription factor
Length = 304
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/72 (23%), Positives = 38/72 (52%)
Frame = +1
Query: 268 VAKARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVR 447
+A A++H+ ++ +D + E++++VIS L+ ++ L NL+ L +
Sbjct: 147 LAAAKRHLTQRIQNLDDKVEKQIDLSKEINSQVISARENISSLEMDLESLHNLITGLDGK 206
Query: 448 VETLESSSSITS 483
++TLE +T+
Sbjct: 207 LDTLEYKQDVTN 218
>At2g22560.1 68415.m02674 kinase interacting protein-related similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]; weak similarity to Myosin II heavy chain,
non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum
Length = 891
Score = 33.9 bits (74), Expect = 0.075
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +1
Query: 274 KARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVE 453
K R+H ++ + +A + EL KVISLE+ I LRN LQ ++
Sbjct: 279 KIREHFESGANSSLNGTDMAEKVD-ELVNKVISLESAVSSQTALIQRLRNETNGLQTQIS 337
Query: 454 TLESSSSITSD 486
TLE+ ++ +D
Sbjct: 338 TLETDKALLAD 348
>At4g15545.1 68417.m02375 expressed protein
Length = 337
Score = 33.5 bits (73), Expect = 0.100
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 337 VPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSS 474
+ + LST+V +LE+E+ DL++ + + LQ VE+LE+S S
Sbjct: 46 ITSIALSTRVSALESESSDLRELLAEKEKEFEELQSHVESLEASLS 91
>At1g50200.1 68414.m05629 aminoacyl-tRNA synthetase family protein
contains Pfam profiles: PF01411 tRNA synthetases class II
(A), PF02272 DHHA1 domain
Length = 1003
Score = 31.1 bits (67), Expect = 0.53
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = +1
Query: 295 NSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSS 474
++L+ A + ++ TK+ SL+NE + +K I + +NL S+++ E ES++S
Sbjct: 832 SALKSRVDAAIIPAAKKADIRTKIASLQNEVRKAQKKIAE-QNLKKSVKLATEAAESAAS 890
>At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1007
Score = 30.7 bits (66), Expect = 0.70
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +1
Query: 274 KARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVE 453
K ++HI+ + ++ VAT+AG + + + +E + D+ K DD + ++ R E
Sbjct: 166 KTKEHIERWRKALEDVATIAGYHSHKWCDEAEMIEKISTDVSKDFDDFVGMAAHME-RTE 224
Query: 454 TL 459
L
Sbjct: 225 QL 226
>At3g19370.1 68416.m02457 expressed protein
Length = 704
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 349 ELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLES 465
++ TK+ +L EN LKK++ L +SLQ R +ES
Sbjct: 147 DMKTKIQTLAAENTQLKKSLVAKEELAVSLQERKFQVES 185
>At5g53570.1 68418.m06656 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 550
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 400 KAIDDLRNLVISLQVRVETLESSSSI 477
K +DD +LV++L ++ETL S SI
Sbjct: 525 KLLDDAHHLVVTLHDKIETLSQSQSI 550
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 334 GVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLE 462
GV TEL K+ +EN+N++L + +L+ + L +E ++
Sbjct: 19 GVKTTELERKIEDMENKNQELTRENRELKERLERLTGEIEEMK 61
>At3g57990.1 68416.m06463 expressed protein
Length = 367
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = +1
Query: 349 ELSTKVISLENENKDLKKAIDDLRNLVISLQ 441
+++ + L ENK LK+A++DLR ++ +++
Sbjct: 263 DVAEVIEELRTENKQLKRAVEDLREVISNVR 293
>At2g18260.1 68415.m02129 syntaxin-related protein, putative
(SYP112) similar to SP|Q42374 Syntaxin-related protein
KNOLLE (Syntaxin 111) (AtSYP111) {Arabidopsis thaliana}
Length = 285
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 289 IKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 456
I S C D V T P +L TK D+K++++ L + + + V VET
Sbjct: 190 ISGSGSCSDLVKTFEVKPEMDLKTK--ERHEAVNDIKRSLNRLHQVFLDMAVLVET 243
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 265 EVAKARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQV 444
E ++ ++ +K EC S+ + TEL +V SLE E K + + + L+
Sbjct: 514 EQSQLQEQLKIQYECSSSLVDV-----TELENQVESLEAELKKQSEEFSESLCRIKELES 568
Query: 445 RVETLE 462
++ETLE
Sbjct: 569 QMETLE 574
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 361 KVISLENENKDLKKAIDDLRNLVISLQVRVE 453
KV++LE+E +L+K +DD ++ L+ VE
Sbjct: 247 KVVALESEIVELQKQLDDAEKMINGLKNVVE 277
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,507,007
Number of Sequences: 28952
Number of extensions: 187387
Number of successful extensions: 531
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -