Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_B20
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53148-1|AAB37071.1| 175|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z71261-3|CAA95802.1| 130|Caenorhabditis elegans Hypothetical pr... 33 0.27
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 29 4.4
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr... 28 5.9
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro... 28 5.9
AF100305-6|AAC68915.1| 352|Caenorhabditis elegans Hypothetical ... 28 5.9
Z54270-9|CAO82016.1| 787|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z54270-5|CAA91031.2| 1339|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z54270-4|CAA91030.2| 1804|Caenorhabditis elegans Hypothetical pr... 28 7.8
U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant respons... 28 7.8
U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant respons... 28 7.8
U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant respons... 28 7.8
AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant respo... 28 7.8
>U53148-1|AAB37071.1| 175|Caenorhabditis elegans Hypothetical
protein C26F1.7 protein.
Length = 175
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 12/126 (9%)
Frame = +2
Query: 209 IKNTEKVVVIKDKYPKAKVHYLVLPHEEINSIYKLNKSHISLLEEFGNIFKELKEEN--- 379
+K + VVI D PKAK HYLVL + I L + + LLEE +EL E+
Sbjct: 25 LKENKSCVVINDIKPKAKNHYLVLSKQHIAKPTDLTVADVPLLEEMEKTGRELLREHLKK 84
Query: 380 -------ESELRAGFHAIP--SMQRMHMHVISTDMISTSLKTKIHWNSFCTKFFIPYDEL 532
E LR GFH P S+ +HMH+I + K+ + K F P EL
Sbjct: 85 KGEADTVEDMLRIGFHLPPLLSVHHLHMHIIYPISDMGLISRKLTFRP--GKVFKPAREL 142
Query: 533 LQELKD 550
+ +LK+
Sbjct: 143 IDQLKE 148
>Z71261-3|CAA95802.1| 130|Caenorhabditis elegans Hypothetical
protein F21C3.3 protein.
Length = 130
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = +2
Query: 173 GLIASMKDPNSIIKNTEKVVVIKDKYPKAKVHYLVLPHEEINSIYKLNKSHISLLEEF-- 346
G I + P II ++ + D P+A +H+LV+P I+ + S +L+ +
Sbjct: 24 GKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDMLENAVDSDAALIGKLMV 83
Query: 347 --GNIFKELKEEN--ESELRAGFHAIPSMQRMHMHVI 445
+ K+L N + G S+ +H+HV+
Sbjct: 84 TASKVAKQLGMANGYRVVVNNGKDGAQSVFHLHLHVL 120
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/82 (25%), Positives = 33/82 (40%)
Frame = +2
Query: 305 YKLNKSHISLLEEFGNIFKELKEENESELRAGFHAIPSMQRMHMHVISTDMISTSLKTKI 484
+ L H L+E K L ++ +EL H I R H H DM++ + K
Sbjct: 1195 FTLKIGHAQLIEAQIRHLK-LSDDVRAELLDALHLISVSDRPHSHKEKMDMLTPKIGAKA 1253
Query: 485 HWNSFCTKFFIPYDELLQELKD 550
+ TK IP ++ K+
Sbjct: 1254 --ANIITKLLIPVEDNFGAFKE 1273
>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical protein
F52E10.1 protein.
Length = 1201
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 194 DPNSIIKNTEKVVVIKDKYPKAKVHYLVLPHEEINSIYKLNK 319
DP+S+ K+ +V + K P+ +H++ E I Y+LN+
Sbjct: 1122 DPDSLAKSARVRMVKQVKSPEHMIHHIEEIDESIGHNYRLNR 1163
>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger protein
protein.
Length = 1203
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 194 DPNSIIKNTEKVVVIKDKYPKAKVHYLVLPHEEINSIYKLNK 319
DP+S+ K+ +V + K P+ +H++ E I Y+LN+
Sbjct: 1124 DPDSLAKSARVRMVKQVKSPEHMIHHIEEIDESIGHNYRLNR 1165
>AF100305-6|AAC68915.1| 352|Caenorhabditis elegans Hypothetical
protein W04B5.2 protein.
Length = 352
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +2
Query: 227 VVVIKDKYPKAKVHYLVLPHEEINSIYKLNKSHISLLEEFGNIFKELKEENESELRAG 400
+++I +KY K ++L++ + +NS+ + ++ E+ N F+ K+ + E R G
Sbjct: 225 IIIIANKYKKCYKNFLLIIYSLLNSLTHFSSTNCENFEK-KNSFRRHKDMDGYECRRG 281
>Z54270-9|CAO82016.1| 787|Caenorhabditis elegans Hypothetical
protein F11C1.5c protein.
Length = 787
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 452 DMISTSLKTKIHWNSFCTKFFIPYDELLQELKDIGNIR--KIPSELHTSLMKTPLQCNQC 625
+++S S K I N+F TKF + E +ELK G + ++P++ MK P +
Sbjct: 316 EVLSDSEKDLI--NTFKTKFELSTHERTRELKTDGALHTVQVPADKRKIQMKLPTPSHPT 373
Query: 626 SFKPKNMP 649
SF +P
Sbjct: 374 SFASTWIP 381
>Z54270-5|CAA91031.2| 1339|Caenorhabditis elegans Hypothetical
protein F11C1.5b protein.
Length = 1339
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 452 DMISTSLKTKIHWNSFCTKFFIPYDELLQELKDIGNIR--KIPSELHTSLMKTPLQCNQC 625
+++S S K I N+F TKF + E +ELK G + ++P++ MK P +
Sbjct: 316 EVLSDSEKDLI--NTFKTKFELSTHERTRELKTDGALHTVQVPADKRKIQMKLPTPSHPT 373
Query: 626 SFKPKNMP 649
SF +P
Sbjct: 374 SFASTWIP 381
>Z54270-4|CAA91030.2| 1804|Caenorhabditis elegans Hypothetical
protein F11C1.5a protein.
Length = 1804
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 452 DMISTSLKTKIHWNSFCTKFFIPYDELLQELKDIGNIR--KIPSELHTSLMKTPLQCNQC 625
+++S S K I N+F TKF + E +ELK G + ++P++ MK P +
Sbjct: 316 EVLSDSEKDLI--NTFKTKFELSTHERTRELKTDGALHTVQVPADKRKIQMKLPTPSHPT 373
Query: 626 SFKPKNMP 649
SF +P
Sbjct: 374 SFASTWIP 381
>U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant response
abnormal protein4, isoform a protein.
Length = 445
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 513 KNFVQKLFQCIFVLRDVDI 457
KNFV LFQC F L D +I
Sbjct: 210 KNFVNNLFQCEFTLLDGEI 228
>U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant response
abnormal protein4, isoform c protein.
Length = 473
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 513 KNFVQKLFQCIFVLRDVDI 457
KNFV LFQC F L D +I
Sbjct: 240 KNFVNNLFQCEFTLLDGEI 258
>U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant response
abnormal protein4, isoform b protein.
Length = 475
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 513 KNFVQKLFQCIFVLRDVDI 457
KNFV LFQC F L D +I
Sbjct: 242 KNFVNNLFQCEFTLLDGEI 260
>AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant response
protein ODR-4 protein.
Length = 445
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 513 KNFVQKLFQCIFVLRDVDI 457
KNFV LFQC F L D +I
Sbjct: 210 KNFVNNLFQCEFTLLDGEI 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,265,628
Number of Sequences: 27780
Number of extensions: 246884
Number of successful extensions: 663
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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