Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B18
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   3.5  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   6.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   6.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   6.1  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -1

Query: 635 KRSITFALVHCLALLYYLPSVQGDPQRTAVASDS 534
           K+S+ F    CL   + L   + DP +  V ++S
Sbjct: 246 KKSLNFRTPSCLETFHTLEKCRPDPPQNLVINES 279


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 708 VHGIYQMNCRMTHXNLP 758
           + G+YQ+N   T  NLP
Sbjct: 362 IKGVYQVNPTKTRTNLP 378


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 320 PKKNKDTYLEAIKMFENQDNRRRG 391
           P+ N    L+A+   +N DN+R G
Sbjct: 287 PEWNLLDGLDAVAFIDNHDNQRTG 310


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 320 PKKNKDTYLEAIKMFENQDNRRRG 391
           P+ N    L+A+   +N DN+R G
Sbjct: 288 PEWNLLDGLDAVAFIDNHDNQRTG 311


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 320 PKKNKDTYLEAIKMFENQDNRRRG 391
           P+ N    L+A+   +N DN+R G
Sbjct: 288 PEWNLLDGLDAVAFIDNHDNQRTG 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,865
Number of Sequences: 336
Number of extensions: 3682
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)