Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B18
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006720-1|AAF60446.1|  350|Caenorhabditis elegans Hypothetical ...   142   2e-34
U39667-5|AAC69008.1|  190|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AL110490-6|CAB54442.2|  687|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z72508-5|CAA96638.1|  525|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AL132876-3|CAD21657.2|  746|Caenorhabditis elegans Hypothetical ...    28   8.3  

>AC006720-1|AAF60446.1|  350|Caenorhabditis elegans Hypothetical
           protein Y17G9B.5 protein.
          Length = 350

 Score =  142 bits (344), Expect = 2e-34
 Identities = 63/127 (49%), Positives = 88/127 (69%)
 Frame = +2

Query: 323 KKNKDTYLEAIKMFENQDNRRRGHVEFIYAALARMKEFGVHKDLQAYKALVDVLPKGKFI 502
           K++KD ++ AI  F+  + R R HVEFI  AL  +KE+GVHKD+  YK L++V PKGK I
Sbjct: 41  KRDKDAFMAAIATFK--EKRGRTHVEFINTALKYVKEYGVHKDIDTYKGLLEVFPKGKMI 98

Query: 503 PSNIFQAEFMHYPKQQQCAVDLLEQMEDNKVMPDSELEQMLLNVFGKRGIPLRKFWRMLY 682
           P  +FQ  F+HYP+QQ CAV +L++ME + V PD E+  +++N FG+     +K  RMLY
Sbjct: 99  PQTVFQKVFLHYPQQQNCAVKVLDEMEWHGVQPDKEIHDIVVNAFGEWNFATKKVKRMLY 158

Query: 683 WMPKFKN 703
           WMPK K+
Sbjct: 159 WMPKLKH 165


>U39667-5|AAC69008.1|  190|Caenorhabditis elegans Hypothetical
           protein C18A11.4 protein.
          Length = 190

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +2

Query: 422 RMKEFGVHKDLQAYKALVDVLPKGKFIPSNIFQAEFMHYPKQQQCAVDLLEQMED 586
           R +    H D + Y  L  VL  G F+P     A +    K+++  +D  E M+D
Sbjct: 23  RARSLPEHPDERHY-VLCKVLKNGGFVPLPASSAAYFKLAKKEELRIDAFENMKD 76


>AL110490-6|CAB54442.2|  687|Caenorhabditis elegans Hypothetical
           protein Y48B6A.6a protein.
          Length = 687

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 20/79 (25%), Positives = 34/79 (43%)
 Frame = +2

Query: 356 KMFENQDNRRRGHVEFIYAALARMKEFGVHKDLQAYKALVDVLPKGKFIPSNIFQAEFMH 535
           K+ E+QD +      F+   LA   E    +  +     VDV  +G    +N FQA+   
Sbjct: 588 KVDEDQDGKISQREFFLIFRLAASGELSCSEVFKTLAESVDVSKEGVLGAANFFQAKIEE 647

Query: 536 YPKQQQCAVDLLEQMEDNK 592
             K  +   ++ E+ E+ K
Sbjct: 648 QTKLSRFEEEMKEEKEEKK 666


>Z72508-5|CAA96638.1|  525|Caenorhabditis elegans Hypothetical
           protein F28H7.6 protein.
          Length = 525

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 352 CFQICIFI-FLWLISKRIIHSHFCV*AFPSSIHKMRRRK 239
           CF I IF+ F+W   K ++  +F    FP  I++  ++K
Sbjct: 479 CFVIAIFMEFIWFFRKNLLLPNFLYRLFPMRINRKPKQK 517


>U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical
           protein C34E10.5 protein.
          Length = 734

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 362 FENQDNRRRGHVEFIYAALARMKEFGVHKDLQAYKALV 475
           F N  N R   +EF+    A +  F  + DLQ YK ++
Sbjct: 618 FMNSSNERSDSIEFVMDRNADLMGFAGYFDLQLYKTVM 655


>AL132876-3|CAD21657.2|  746|Caenorhabditis elegans Hypothetical
           protein Y105E8A.3 protein.
          Length = 746

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
 Frame = -3

Query: 495 LPLGSTSTNALYACKSLCTPNSFILAKAA*INSTCPXXXXXXXXXXXIASKYVSLF-FFG 319
           L   S   N L+ CK +CT   F L K      +             + +  + +F F+G
Sbjct: 46  LAKSSHIVNLLWLCKIICTCILFPLQKPLSAGKSLKRGIMPMVLKLSLMNSVIEVFWFYG 105

Query: 318 LLAKGSYTATFVFELS 271
           +   G   +  VFELS
Sbjct: 106 ITLCGPLRSVLVFELS 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,773,891
Number of Sequences: 27780
Number of extensions: 346035
Number of successful extensions: 861
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)