Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B18
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   7.2  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   9.5  
AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          21   9.5  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   9.5  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 668 WRMLYWMPKFKNL 706
           WR +Y M +F+NL
Sbjct: 384 WRQIYNMVRFRNL 396


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 716 YLPDELPND 742
           Y+P ELPND
Sbjct: 153 YIPPELPND 161


>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 56 MTDFAENLTFDQEE 15
          MT+F EN++FD ++
Sbjct: 9  MTEFEENVSFDIDD 22


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 364 KHFDCFQICIF 332
           K F CF+ C+F
Sbjct: 50  KKFGCFEACVF 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,740
Number of Sequences: 438
Number of extensions: 4064
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)