Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B14
         (396 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK123990-1|BAC85744.1|  120|Homo sapiens protein ( Homo sapiens ...    29   5.6  
AK074528-1|BAC11041.1|  145|Homo sapiens protein ( Homo sapiens ...    28   9.7  

>AK123990-1|BAC85744.1|  120|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41996 fis, clone SPLEN2029051. ).
          Length = 120

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 75  CWLSSPARRPTRMWCLCRTLQLPATPFPTCHPYLYLPSTAL 197
           C L S   RP    C+   +  P +PF TC  +L+  +TA+
Sbjct: 68  CRLGSELGRPG---CVATGVSAPTSPFETCPAFLFAAATAV 105


>AK074528-1|BAC11041.1|  145|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90047 fis, clone HEMBA1002316. ).
          Length = 145

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +3

Query: 138 LPATPFPTCHPYLYLPSTALHSPASTHKSH 227
           L +TP P   PYLY P   + SP ST  SH
Sbjct: 42  LLSTPAPL--PYLYPPIYTITSPVSTPSSH 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,044,581
Number of Sequences: 237096
Number of extensions: 991245
Number of successful extensions: 2424
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2424
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)