Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_B13
(754 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 56 3e-08
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 54 8e-08
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 50 2e-06
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 48 5e-06
At1g67230.1 68414.m07652 expressed protein 32 0.47
At5g17220.1 68418.m02018 glutathione S-transferase, putative 30 1.4
At2g44630.1 68415.m05555 kelch repeat-containing F-box family pr... 29 2.5
At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase, pu... 28 5.8
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 28 5.8
At2g06200.1 68415.m00682 expressed protein 28 5.8
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/138 (25%), Positives = 69/138 (50%)
Frame = +2
Query: 287 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 466
SY Y +YF+ +G AK F++ S + E L+++ KRGG++ S +
Sbjct: 112 SYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQS---IVM 168
Query: 467 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVS 646
V+ G + + AL +K + E++ +H +KN+D+ + +IE EF++
Sbjct: 169 PLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDV----HLADFIESEFLT 224
Query: 647 XQADTIRXLAGHTSDLKR 700
Q + I+ ++ + + L+R
Sbjct: 225 EQVEAIKLISEYVAQLRR 242
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 54.4 bits (125), Expect = 8e-08
Identities = 35/138 (25%), Positives = 68/138 (49%)
Frame = +2
Query: 287 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 466
SY Y +YF+ +G AK F++ S + E L+++ KRGG++ +
Sbjct: 110 SYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQS 169
Query: 467 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVS 646
+ E G + A+ AL +K + E++ +H +KN D+ ++ +IE F++
Sbjct: 170 EFDH---PEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDV----QLADFIESVFLN 222
Query: 647 XQADTIRXLAGHTSDLKR 700
Q + I+ ++ + S L+R
Sbjct: 223 EQVEAIKKISEYVSQLRR 240
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 50.0 bits (114), Expect = 2e-06
Identities = 40/185 (21%), Positives = 87/185 (47%), Gaps = 4/185 (2%)
Frame = +2
Query: 155 YQNVDQGCRRTLSLP---HCSAYYGQFKD-NHVVANELKALASLYLKRSYHYLLSASYFN 322
+Q ++ + L++P H S +F D + V NE ++ SY Y +YF+
Sbjct: 64 FQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQ---INVEYNVSYVYHSMYAYFD 120
Query: 323 NYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVEVGH 502
+G AK F++ S++ +++ +RGG++ H + + E G
Sbjct: 121 RDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKL--HPIVSPISEFEH-AEKGD 177
Query: 503 EIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSXQADTIRXLAGH 682
+ A+ AL +K E++ +H+ ++N +D ++ ++E EF+ Q + I+ ++ +
Sbjct: 178 ALYAMELALSLEKLTNEKLLNVHKVASEN----NDPQLADFVESEFLGEQIEAIKKISDY 233
Query: 683 TSDLK 697
+ L+
Sbjct: 234 ITQLR 238
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 48.4 bits (110), Expect = 5e-06
Identities = 33/138 (23%), Positives = 63/138 (45%)
Frame = +2
Query: 287 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 466
SY Y +YF+ +GFAK F S + +++ KRGG++ S
Sbjct: 104 SYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVS 163
Query: 467 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVS 646
+ E G + A+ AL +K E++ + KN+D+ ++ ++E EF+
Sbjct: 164 EFDHE---EKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDV----QLVDFVESEFLG 216
Query: 647 XQADTIRXLAGHTSDLKR 700
Q + I+ ++ + + L+R
Sbjct: 217 EQVEAIKKISEYVAQLRR 234
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 31.9 bits (69), Expect = 0.47
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Frame = +2
Query: 329 QTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTT---LKGDK-GSNYTVEV 496
+ RE F K + +L D+ K +K++T + K++ H LK +K +N +E
Sbjct: 515 KAQRESFEKEWEEL-DERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMER 573
Query: 497 GHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEI-TQYIEEEFVSXQADTIRXL 673
E +AKA + ER + ++ S LLHD E+ + +E + + + R L
Sbjct: 574 ELETLEVAKASFAETMEYERSMLSKKAESERSQLLHDIEMRKRKLESDMQTILEEKEREL 633
Query: 674 AGHTSDLKRFITXNNGKDLSLAVYLFD 754
K+ K+LS YL D
Sbjct: 634 QAK----KKLFEEEREKELSNINYLRD 656
>At5g17220.1 68418.m02018 glutathione S-transferase, putative
Length = 214
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 212 YYGQFKDNHVVANELKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSD-DSWE 388
Y + N +A E +A L + YL+S + N R F + + ++SD SW+
Sbjct: 147 YNNRLSSNRFLAGEEFTMADLTHMPAMGYLMSITDINQMVKARGSFNRWWEEISDRPSWK 206
Query: 389 KTIGLIKH 412
K + L H
Sbjct: 207 KLMVLAGH 214
>At2g44630.1 68415.m05555 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF00646: F-box domain, PF01344: Kelch motif
Length = 372
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 248 NELKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKT 394
NE AS+ L R + L S Y N+Y T R+G + + + +D+W KT
Sbjct: 218 NEWFTHASVSLDRKVYALNSREYMNSYDT-RDGSYQRY-TIPEDNWWKT 264
>At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative similar to
rof1 [Arabidopsis thaliana] GI:1373396
Length = 578
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 377 DSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVEVGHEIGALAKALDTQKQ 544
+ WEK L + K +++ T + G +TV+ GH AL+KA+ T K+
Sbjct: 173 EKWEKPKDLDEVYVKYEARLE--DGTIVGKSDGVEFTVKEGHFCPALSKAVKTMKR 226
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 317 FNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRG 427
+N + NR G K + WEK IG ++H KRG
Sbjct: 1729 WNKWIYNRGGIGVPPEKSWESWWEKEIGHLRHSGKRG 1765
>At2g06200.1 68415.m00682 expressed protein
Length = 244
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 429 PPLLVTCFMRPMVFSHESSDNFLKSFANPSL 337
PP L+ RP +FS SS + SF +P+L
Sbjct: 32 PPHLLFLIKRPFLFSSSSSSSSSSSFFSPTL 62
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,262,273
Number of Sequences: 28952
Number of extensions: 306655
Number of successful extensions: 916
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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