Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B12
         (669 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    23   2.0  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    23   2.0  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    23   2.0  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    23   2.0  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   3.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   6.1  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   6.1  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   6.1  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   6.1  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 182 EMEKTPNLVI-VSPNVKYSDDFIYADYEYNETLVKKI 289
           E  K P ++  +S N KYS+   Y +  YN    KK+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKL 110


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 182 EMEKTPNLVI-VSPNVKYSDDFIYADYEYNETLVKKI 289
           E  K P ++  +S N KYS+   Y +  YN    KK+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKL 110


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 182 EMEKTPNLVI-VSPNVKYSDDFIYADYEYNETLVKKI 289
           E  K P ++  +S N KYS+   Y +  YN    KK+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKL 110


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 182 EMEKTPNLVI-VSPNVKYSDDFIYADYEYNETLVKKI 289
           E  K P ++  +S N KYS+   Y +  YN    KK+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKL 110


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 458 GSLDANWFGSITQASTVRLGLDEKGNDVNV 547
           G +D    G  T+A+ +RLGL E    VN+
Sbjct: 214 GFIDGLGLGDNTKAAVMRLGLMEIIKFVNI 243


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 450 VFQDNWCRLAKTAAVNVEPLLPPHP 376
           +F+ NW  L     ++VE +   HP
Sbjct: 150 IFRQNWASLQPYKKLSVEVVRREHP 174


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = +2

Query: 470 ANWFGSITQASTVRLGLDEKGNDVNVPMNSLLPMVNPDDLFIDGWDISPLNXAES 634
           A WF + T +       D K    NV    +LP +  D +    +D   L+  +S
Sbjct: 10  AAWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLSFEDS 64


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = +2

Query: 470 ANWFGSITQASTVRLGLDEKGNDVNVPMNSLLPMVNPDDLFIDGWDISPLNXAES 634
           A WF + T +       D K    NV    +LP +  D +    +D   L+  +S
Sbjct: 10  AAWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLSFEDS 64


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = +2

Query: 470 ANWFGSITQASTVRLGLDEKGNDVNVPMNSLLPMVNPDDLFIDGWDISPLNXAES 634
           A WF + T +       D K    NV    +LP +  D +    +D   L+  +S
Sbjct: 10  AAWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLSFEDS 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,107
Number of Sequences: 438
Number of extensions: 4056
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)