Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B11
         (432 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04483-1|AAA99893.1|   83|Homo sapiens ribosomal protein S21 pro...    97   2e-20
CR542132-1|CAG46929.1|   83|Homo sapiens RPS21 protein.                97   2e-20
BC021990-1|AAH21990.1|   83|Homo sapiens ribosomal protein S21 p...    97   2e-20
AL121832-3|CAC21458.1|   83|Homo sapiens ribosomal protein S21 p...    97   2e-20
AJ250907-1|CAB83213.1|   83|Homo sapiens ribosomal protein S21 p...    97   2e-20
AB061843-1|BAB79481.1|   83|Homo sapiens ribosomal protein S21 p...    97   2e-20
BC018140-1|AAH18140.1|   81|Homo sapiens RPS21 protein protein.        94   2e-19
AB007157-1|BAA25821.1|   54|Homo sapiens ribosomal protein S21 p...    72   7e-13
AL121832-2|CAC29248.1|   90|Homo sapiens ribosomal protein S21 p...    67   3e-11
BC027976-1|AAH27976.1|   66|Homo sapiens RPS21 protein protein.        46   7e-05
AL121832-1|CAC29247.1|   66|Homo sapiens ribosomal protein S21 p...    46   7e-05
X79563-1|CAA56100.2|   97|Homo sapiens 8.2 kDa differentiation f...    42   0.001

>L04483-1|AAA99893.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 44/70 (62%), Positives = 54/70 (77%)
 Frame = +1

Query: 76  PRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLT 255
           PR CSASNR+I AKDHAS+Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL 
Sbjct: 14  PRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLA 73

Query: 256 KKDGILAKNY 285
           K DGI++KN+
Sbjct: 74  KADGIVSKNF 83


>CR542132-1|CAG46929.1|   83|Homo sapiens RPS21 protein.
          Length = 83

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 44/70 (62%), Positives = 54/70 (77%)
 Frame = +1

Query: 76  PRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLT 255
           PR CSASNR+I AKDHAS+Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL 
Sbjct: 14  PRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLA 73

Query: 256 KKDGILAKNY 285
           K DGI++KN+
Sbjct: 74  KADGIVSKNF 83


>BC021990-1|AAH21990.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 44/70 (62%), Positives = 54/70 (77%)
 Frame = +1

Query: 76  PRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLT 255
           PR CSASNR+I AKDHAS+Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL 
Sbjct: 14  PRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLA 73

Query: 256 KKDGILAKNY 285
           K DGI++KN+
Sbjct: 74  KADGIVSKNF 83


>AL121832-3|CAC21458.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 44/70 (62%), Positives = 54/70 (77%)
 Frame = +1

Query: 76  PRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLT 255
           PR CSASNR+I AKDHAS+Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL 
Sbjct: 14  PRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLA 73

Query: 256 KKDGILAKNY 285
           K DGI++KN+
Sbjct: 74  KADGIVSKNF 83


>AJ250907-1|CAB83213.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 44/70 (62%), Positives = 54/70 (77%)
 Frame = +1

Query: 76  PRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLT 255
           PR CSASNR+I AKDHAS+Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL 
Sbjct: 14  PRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLA 73

Query: 256 KKDGILAKNY 285
           K DGI++KN+
Sbjct: 74  KADGIVSKNF 83


>AB061843-1|BAB79481.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 44/70 (62%), Positives = 54/70 (77%)
 Frame = +1

Query: 76  PRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLT 255
           PR CSASNR+I AKDHAS+Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL 
Sbjct: 14  PRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLA 73

Query: 256 KKDGILAKNY 285
           K DGI++KN+
Sbjct: 74  KADGIVSKNF 83


>BC018140-1|AAH18140.1|   81|Homo sapiens RPS21 protein protein.
          Length = 81

 Score = 93.9 bits (223), Expect = 2e-19
 Identities = 43/68 (63%), Positives = 52/68 (76%)
 Frame = +1

Query: 76  PRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLT 255
           PR CSASNR+I AKDHAS+Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL 
Sbjct: 14  PRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLA 73

Query: 256 KKDGILAK 279
           K DGI++K
Sbjct: 74  KADGIVSK 81


>AB007157-1|BAA25821.1|   54|Homo sapiens ribosomal protein S21
           protein.
          Length = 54

 Score = 72.1 bits (169), Expect = 7e-13
 Identities = 33/54 (61%), Positives = 40/54 (74%)
 Frame = +1

Query: 97  NRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTK 258
           NR+I AKDHAS+Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL K
Sbjct: 1   NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAK 54


>AL121832-2|CAC29248.1|   90|Homo sapiens ribosomal protein S21
           protein.
          Length = 90

 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 30/49 (61%), Positives = 36/49 (73%)
 Frame = +1

Query: 76  PRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRM 222
           PR CSASNR+I AKDHAS+Q+ +A+V   TGR     K Y +CGAIRRM
Sbjct: 14  PRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRM 62


>BC027976-1|AAH27976.1|   66|Homo sapiens RPS21 protein protein.
          Length = 66

 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = +1

Query: 76  PRXCSASNRLIHAKDHASVQLVIADVXPATGR 171
           PR CSASNR+I AKDHAS+Q+ +A+V    GR
Sbjct: 14  PRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45


>AL121832-1|CAC29247.1|   66|Homo sapiens ribosomal protein S21
           protein.
          Length = 66

 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = +1

Query: 76  PRXCSASNRLIHAKDHASVQLVIADVXPATGR 171
           PR CSASNR+I AKDHAS+Q+ +A+V    GR
Sbjct: 14  PRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45


>X79563-1|CAA56100.2|   97|Homo sapiens 8.2 kDa differentiation
           factor protein.
          Length = 97

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = +1

Query: 76  PRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCG 207
           PR CSASNR+I AKDHAS+Q+ +A +  +      + K+ +  G
Sbjct: 14  PRKCSASNRIIGAKDHASIQMNVARLTRSQAGLMASLKLMLSAG 57


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,186,607
Number of Sequences: 237096
Number of extensions: 840290
Number of successful extensions: 1544
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1544
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)