Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_B08
(612 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 76 3e-14
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 74 2e-13
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 54 2e-07
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 54 2e-07
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 52 6e-07
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 49 4e-06
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 47 2e-05
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 44 2e-04
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 42 7e-04
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 42 9e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 41 0.001
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 40 0.003
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 38 0.011
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 37 0.019
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 37 0.019
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 37 0.019
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 36 0.033
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 36 0.033
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 36 0.033
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 36 0.033
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 36 0.033
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 36 0.057
AE014134-3392|AAF53993.2| 241|Drosophila melanogaster CG2042-PA... 29 4.9
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 76.2 bits (179), Expect = 3e-14
Identities = 39/113 (34%), Positives = 64/113 (56%)
Frame = -1
Query: 612 VSXYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYS 433
V+ Y+P + ++I ++ L ++LGD NS WGS +N+ G ++ ++ S
Sbjct: 104 VNAYIPPSQIFSSSDISEILQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENS 163
Query: 432 LCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIII 274
L +LN GSPT L+ + ID+S+ +PQ+A SWS + + SDH+PI I
Sbjct: 164 LIVLNDGSPTHLS-THNTFTHIDISLISPQIAHMCSWSISDNLHGSDHFPITI 215
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 73.7 bits (173), Expect = 2e-13
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = -1
Query: 609 SXYVPHPSLQIFNE-IKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYS 433
S Y+ P+ I N+ + N ++ P +I GDFN H WGS +N G +D
Sbjct: 101 STYIS-PTKNITNQTLHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMH 159
Query: 432 LCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS-FP 265
L +LN SPT + + IDL++C+P LA W L + SDH+PII + FP
Sbjct: 160 LILLNDKSPTHFS-THNTYTHIDLTLCSPILAPHAKWKILNDLHGSDHFPIITTLFP 215
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 54.0 bits (124), Expect = 2e-07
Identities = 29/99 (29%), Positives = 48/99 (48%)
Frame = -1
Query: 555 ISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVI 376
IS + F+I GDFNS H +W + +N +G L ++ D+ IL PT +
Sbjct: 149 ISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPH-NHKA 207
Query: 375 SAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIISFP*N 259
A L +C + + L+ + +SDH P++I + N
Sbjct: 208 KASTLDLCLTNIPNQLANPAVMQELSSDHLPVVIKYSTN 246
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 54.0 bits (124), Expect = 2e-07
Identities = 29/99 (29%), Positives = 48/99 (48%)
Frame = -1
Query: 555 ISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVI 376
IS + F+I GDFNS H +W + +N +G L ++ D+ IL PT +
Sbjct: 97 ISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPH-NHKA 155
Query: 375 SAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIISFP*N 259
A L +C + + L+ + +SDH P++I + N
Sbjct: 156 KASTLDLCLTNIPNQLANPAVMQELSSDHLPVVIKYSTN 194
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 52.0 bits (119), Expect = 6e-07
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = -1
Query: 561 NLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLT-KPG 385
++I + +++ GD+N+ H WG + ++ G EL + L + IL +GSPTR P
Sbjct: 124 DIIRACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPS 183
Query: 384 EVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 271
S ID ++ + L+ T +SDH P+IIS
Sbjct: 184 HTPSCIDFAV-YHGIPDHLATITQSWDLDSDHLPLIIS 220
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 49.2 bits (112), Expect = 4e-06
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = -1
Query: 540 RPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSG-SPTRLTKPGEVISAID 364
RP +I GD N+ T WGS +SN+ G ++D +++ L +LN G PT G S ID
Sbjct: 118 RPTVIGGDLNAWATEWGSRISNTRGRAVIDAMNLLDLVLLNDGFKPTFNNDRG--TSFID 175
Query: 363 LSICTPQLASSLSWSTLCSTYNSDH 289
++ + L + +W SDH
Sbjct: 176 VTFVSRVLVAGSNWMVHEDITLSDH 200
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = -1
Query: 603 YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCI 424
Y+P I ++ K++ + L F+ GD+N+ H WG+ S G L +++ +
Sbjct: 110 YLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQV 169
Query: 423 LNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPII 277
L +G PT + P SA+D I L TL +SDH PI+
Sbjct: 170 LATGEPTFYSYNPLLTPSALDFFITCGYGMGRLDVQTL-QELSSDHLPIL 218
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = -1
Query: 603 YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCI 424
Y P +E K+++ F++ GD+N+ H WG+ SN G L +++ +
Sbjct: 109 YCPPRFAWTTDEFKDILEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDS 168
Query: 423 LNSGSPTRLTKPGEVISA-IDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 271
L +G PTR ID ++ L + S + +SDH P++I+
Sbjct: 169 LATGGPTRYPYGCRGSPGYIDFALTKGVLGIHANISAVVE-LSSDHLPLVIT 219
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 41.9 bits (94), Expect = 7e-04
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = -1
Query: 534 FMILGDFNSHHTSWGSSVSNSYGYELLD--ILDMYSLCILNSGSPTRLTKP-GEVISAID 364
F+ GD+N+ HT WGS + N G +L I L ++ GSPT ++ ID
Sbjct: 132 FIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLNKLPDLID 191
Query: 363 LSICTPQLASSLSWSTLCSTYNSDHYPIII 274
++ T ++ SL + +SDH P++I
Sbjct: 192 FAV-TKNISRSLVKAECLPDLSSDHSPVLI 220
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 41.5 bits (93), Expect = 9e-04
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = -1
Query: 573 NEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDM--YSLCILNSGSPTR 400
++ + L F+ GD+N+ HT WGS + + G +L + L L ++ G PT
Sbjct: 118 DQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTY 177
Query: 399 L-TKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 271
P ++ ID +I T + ++ + + +SDH P+ ++
Sbjct: 178 WPADPRKIPDLIDFAI-TKHVPRNMVTAEALADLSSDHSPVFLN 220
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = -1
Query: 573 NEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDM--YSLCILNSGSPTR 400
++ + L F+ GD+N+ HT WGS + G +L + L L ++ G PT
Sbjct: 118 DQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTY 177
Query: 399 L-TKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 271
P ++ ID +I T + ++ + + +SDH P+ ++
Sbjct: 178 WPADPRKIPDLIDFAI-TKHVPRNMVTAEALADLSSDHSPVFLN 220
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = -1
Query: 603 YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCI 424
Y+P I ++ K++ + L F+ GD+N+ H WG+ S G L +++ +
Sbjct: 110 YLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQV 169
Query: 423 LNSGSPT 403
L +G PT
Sbjct: 170 LATGEPT 176
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 37.9 bits (84), Expect = 0.011
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Frame = -1
Query: 597 PHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-IL 421
PH + N + + + ++ GD+N+ H WG + G L D + S+ I+
Sbjct: 140 PHHFTDVLNFAEKTMGGQTK-LILCGDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIV 198
Query: 420 NSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIII 274
+GS T + SAID SIC +L + + +SDH PI++
Sbjct: 199 ATGSATHFPHDTRKSPSAIDFSIC-KRLGRYEKRISSSAHLSSDHLPILL 247
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.019
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = -1
Query: 582 QIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSP 406
++FN + L+ + F++ GD+N H WG+ +S + G L IL L I+ +G
Sbjct: 137 KLFNHFEMLLDGKSK-FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 405 TRLT-KPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDHYPIII 274
T + SA+D +IC L ++ST +SDH PI I
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQI 239
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.019
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = -1
Query: 582 QIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSP 406
++FN + L+ + F++ GD+N H WG+ +S + G L IL L I+ +G
Sbjct: 137 KLFNHFEMLLDGKSK-FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 405 TRLT-KPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDHYPIII 274
T + SA+D +IC L ++ST +SDH PI I
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQI 239
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.019
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = -1
Query: 582 QIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSP 406
++FN + L+ + F++ GD+N H WG+ +S + G L IL L I+ +G
Sbjct: 137 KLFNHFEMLLDGKSK-FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 405 TRLT-KPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDHYPIII 274
T + SA+D +IC L ++ST +SDH PI I
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQI 239
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 36.3 bits (80), Expect = 0.033
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = -1
Query: 603 YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC- 427
++PH + N + + + F++ GD+N+ H WG + + G L + + S
Sbjct: 126 WLPHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCTRACQRGTALYEAVQADSTAE 184
Query: 426 ILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIII 274
I+ +G T + SAID SIC L + + +SDH PI++
Sbjct: 185 IIATGCATHFPHDTRKNPSAIDFSIC-KGLGRFEKRISSGADLSSDHLPILL 235
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 36.3 bits (80), Expect = 0.033
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = -1
Query: 597 PHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-IL 421
PH + N + + + F++ GD+N+ H WG + + G L + + + I+
Sbjct: 12 PHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 70
Query: 420 NSGSPTRLT-KPGEVISAIDLSIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCY 250
+G T + SAID SIC +L +S S + +SDH PI++ +T
Sbjct: 71 ATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTST 127
Query: 249 CHMAK 235
+ K
Sbjct: 128 LFLQK 132
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.3 bits (80), Expect = 0.033
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = -1
Query: 597 PHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-IL 421
PH + N + + + F++ GD+N+ H WG + + G L + + + I+
Sbjct: 128 PHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 186
Query: 420 NSGSPTRLT-KPGEVISAIDLSIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCY 250
+G T + SAID SIC +L +S S + +SDH PI++ +T
Sbjct: 187 ATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTST 243
Query: 249 CHMAK 235
+ K
Sbjct: 244 LFLQK 248
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 36.3 bits (80), Expect = 0.033
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = -1
Query: 597 PHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-IL 421
PH + N + + + F++ GD+N+ H WG + + G L + + + I+
Sbjct: 90 PHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 148
Query: 420 NSGSPTRLT-KPGEVISAIDLSIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCY 250
+G T + SAID SIC +L +S S + +SDH PI++ +T
Sbjct: 149 ATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTSN 205
Query: 249 CHMAK 235
+ K
Sbjct: 206 LFLQK 210
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.3 bits (80), Expect = 0.033
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = -1
Query: 597 PHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-IL 421
PH + N + + + F++ GD+N+ H WG + + G L + + + I+
Sbjct: 128 PHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 186
Query: 420 NSGSPTRLT-KPGEVISAIDLSIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCY 250
+G T + SAID SIC +L +S S + +SDH PI++ +T
Sbjct: 187 ATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTSN 243
Query: 249 CHMAK 235
+ K
Sbjct: 244 LFLQK 248
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.5 bits (78), Expect = 0.057
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = -1
Query: 597 PHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-IL 421
PH + N + + + F++ GD+N+ H WG + + G L + + + I+
Sbjct: 128 PHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 186
Query: 420 NSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCYCH 244
+G T + SAID SIC L + + +SDH PI++ +T
Sbjct: 187 ATGCATHFPHDTRKNPSAIDFSIC-KGLGRLEKRISSVADLSSDHLPILLEINLDTSTLF 245
Query: 243 MAK 235
+ K
Sbjct: 246 LQK 248
>AE014134-3392|AAF53993.2| 241|Drosophila melanogaster CG2042-PA
protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -1
Query: 522 GDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVIS 373
GD+N+ H WG+ N G L +++ + L +G P R + + ++
Sbjct: 57 GDWNTSHWLWGAERCNRRGRALANLVLSTGMSSLVTGGPKRFQEAVDTLT 106
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,472,769
Number of Sequences: 53049
Number of extensions: 431458
Number of successful extensions: 810
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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