Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B07
         (744 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CYV6 Cluster: Large protein with possible conserved (...    36   1.1  
UniRef50_A7GYP2 Cluster: Dihydrodipicolinate synthase; n=4; Camp...    33   5.6  
UniRef50_A2E7S5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  

>UniRef50_Q5CYV6 Cluster: Large protein with possible conserved
            (Animals and fungi) N-terminal and C-terminal regions;
            n=3; Cryptosporidium|Rep: Large protein with possible
            conserved (Animals and fungi) N-terminal and C-terminal
            regions - Cryptosporidium parvum Iowa II
          Length = 2776

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +2

Query: 194  YMYFCKIVILLYLNLAGMTYTNRDESNYSIDKTSVTIY*HSLHSISNKRIYEDN 355
            Y   CKI+  +Y+NLA  T+   D+ NY+I  T  ++     HS+ +  IY D+
Sbjct: 1506 YFKICKILFSIYMNLAKNTHGGIDQKNYTIKSTFYSLNLFVNHSLQD-CIYFDH 1558


>UniRef50_A7GYP2 Cluster: Dihydrodipicolinate synthase; n=4;
           Campylobacter|Rep: Dihydrodipicolinate synthase -
           Campylobacter curvus 525.92
          Length = 261

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +3

Query: 261 ETSLTTRLTKHLSQFINIVYIPYP-INESTKIIGQCTSNENGTK*RLYNFESFV 419
           +T L  ++T  LS+  NI++ P+P  NE+T I   C       K  + NFE F+
Sbjct: 43  KTFLLNKITADLSEQQNIIFFPHPFFNEATFIRALCERLFGEKKDGIENFEIFI 96


>UniRef50_A2E7S5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 744

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
 Frame = +1

Query: 373 TRMELNEDYTILKALYPGRNVKICC*YTHIKFDFNQTMITTLSANAHL*KAAATLFQATN 552
           T +E   DYT+    YP         Y   ++  N T +  +S   ++    +  F +TN
Sbjct: 245 TNLESKADYTLY---YPSFTKTWAVTYAQAQYTTNTT-VKYMSFVTNMNDVLSATFISTN 300

Query: 553 IAIIKVNACDFVSHNKWR-----EATVTYKCAARLLIESVIKHYS*VMASRRLMRRAQYT 717
            +II+V+  ++  +N W       ATVTY       ++  + +Y+ ++++        YT
Sbjct: 301 NSIIQVDE-NYTGNNIWAYIRISTATVTYTLEDNTKLKLTMTNYAYILSNNNSFSAGYYT 359

Query: 718 IQY 726
             Y
Sbjct: 360 FTY 362


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,637,636
Number of Sequences: 1657284
Number of extensions: 13288671
Number of successful extensions: 26361
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26344
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)