Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_B05
(493 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 163 2e-39
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 163 2e-39
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 159 2e-38
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 134 8e-31
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 132 5e-30
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 132 5e-30
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 132 5e-30
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 129 3e-29
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 129 4e-29
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 128 5e-29
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 128 7e-29
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 126 2e-28
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 126 3e-28
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 126 3e-28
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 120 2e-26
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 120 2e-26
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 119 3e-26
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 118 5e-26
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 118 9e-26
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 114 9e-25
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 114 1e-24
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 113 3e-24
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 111 6e-24
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 111 6e-24
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 111 6e-24
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 111 6e-24
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 111 6e-24
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 105 4e-22
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 105 7e-22
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 102 4e-21
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 102 5e-21
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 94 1e-18
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 83 4e-15
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 81 1e-14
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 81 1e-14
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 73 3e-12
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 73 5e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 5e-12
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 66 3e-10
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 63 3e-09
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 63 3e-09
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 62 7e-09
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 5e-08
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 59 6e-08
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 58 8e-08
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 58 1e-07
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 57 2e-07
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 57 2e-07
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 57 2e-07
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 56 3e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 56 6e-07
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 53 3e-06
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 52 9e-06
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 51 1e-05
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 51 2e-05
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 50 3e-05
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 50 3e-05
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 50 3e-05
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 50 3e-05
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 50 4e-05
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 50 4e-05
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 49 5e-05
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 49 5e-05
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 49 7e-05
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 48 9e-05
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 48 2e-04
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 47 2e-04
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 46 3e-04
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 46 3e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 45 8e-04
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 45 0.001
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 44 0.001
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 44 0.002
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 43 0.003
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 42 0.007
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 42 0.010
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 42 0.010
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 42 0.010
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 42 0.010
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 41 0.013
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.023
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 40 0.030
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 40 0.030
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 40 0.030
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 39 0.053
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 37 0.21
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 33 2.6
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 33 2.6
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 33 2.6
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 33 3.5
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 4.6
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 33 4.6
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 6.0
UniRef50_Q0BZ17 Cluster: Amidohydrolase family/endoribonuclease ... 32 8.0
UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1; Boha... 32 8.0
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 163 bits (396), Expect = 2e-39
Identities = 91/162 (56%), Positives = 97/162 (59%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VTAHA N LVPL+LGAPD+AFPR+NN+ F I
Sbjct: 55 VTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSI 114
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 115 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLS 174
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
FDQ+PLFV AVGITAF AGAIT+LLTDRNLNTSF
Sbjct: 175 FDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSF 216
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 163 bits (396), Expect = 2e-39
Identities = 88/161 (54%), Positives = 104/161 (64%)
Frame = -1
Query: 487 DVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXX 308
+VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 17 EVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPK 76
Query: 307 IDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLIL 128
I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+L
Sbjct: 77 IEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLML 136
Query: 127 FIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVT 5
FIRGNA+SGAP++ GTNQFPNPP KA AVT
Sbjct: 137 FIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVT 177
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 159 bits (387), Expect = 2e-38
Identities = 88/162 (54%), Positives = 96/162 (59%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VTAHA N L+PL+LGAPD+AFPR+NN+ F I
Sbjct: 31 VTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNNMSFWLLPPSLILLISSSI 90
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 91 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMS 150
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
FDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSF
Sbjct: 151 FDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSF 192
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 134 bits (325), Expect = 8e-31
Identities = 77/162 (47%), Positives = 87/162 (53%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VTAHA N LVPL+LGAPD+AFPR+NN+ F
Sbjct: 41 VTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAA 100
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMK 160
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+ + LFV +V ITA AGAIT+LLTDRN NTSF
Sbjct: 161 IELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSF 202
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 132 bits (318), Expect = 5e-30
Identities = 78/162 (48%), Positives = 88/162 (54%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VTAHA N LVPL++GAPD+AFPR+NN+ F
Sbjct: 59 VTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASST 118
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
Q PLFV +V ITA A IT+LLTDRNLNT+F
Sbjct: 179 QYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTF 220
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 132 bits (318), Expect = 5e-30
Identities = 74/162 (45%), Positives = 87/162 (53%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N LVP+++GAPD+AFPR+NNI F
Sbjct: 58 ITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAF 117
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+LPLFV A+ +TA AGAIT+LLTDRN NTSF
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSF 219
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 132 bits (318), Expect = 5e-30
Identities = 74/162 (45%), Positives = 87/162 (53%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N LVP+++GAPD+AFPR+NNI F
Sbjct: 58 ITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAF 117
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+LPLFV A+ +TA AGAIT+LLTDRN NTSF
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSF 219
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 129 bits (312), Expect = 3e-29
Identities = 75/162 (46%), Positives = 86/162 (53%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VTAHA N LVPL++GAPD+AFPR+NN+ F
Sbjct: 58 VTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSG 117
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
Q PLFV AV +TA A IT+LLTDRNLNT+F
Sbjct: 178 QYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTF 219
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 129 bits (311), Expect = 4e-29
Identities = 75/162 (46%), Positives = 86/162 (53%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VTAHA N L+PL++GAPD+AFPR+NN+ F
Sbjct: 47 VTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSG 106
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAIS 166
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
Q PLFV AV ITA A IT+LLTDRNLNT+F
Sbjct: 167 QYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTF 208
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 128 bits (310), Expect = 5e-29
Identities = 70/162 (43%), Positives = 88/162 (54%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N VP+++GAPD+AFPR+NNI F +
Sbjct: 61 ITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSAL 120
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS +
Sbjct: 121 VEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMT 180
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+LPLFV +V +TAF AGAIT+LLTDRN NT+F
Sbjct: 181 MHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTF 222
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 128 bits (309), Expect = 7e-29
Identities = 73/162 (45%), Positives = 87/162 (53%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VTAHA N VPL++GAPD+AFPR+NNI F +
Sbjct: 59 VTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSL 118
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS +
Sbjct: 119 VEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMT 178
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
++PLFV +V ITA AGAIT+LLTDR NT+F
Sbjct: 179 MSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTF 220
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 126 bits (305), Expect = 2e-28
Identities = 73/162 (45%), Positives = 86/162 (53%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VTAHA N LVPL++GAPD+AFPR+NN+ F
Sbjct: 58 VTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSG 117
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
Q PLFV +V +TA A IT+LLTDRNLNT+F
Sbjct: 178 QYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTF 219
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 126 bits (304), Expect = 3e-28
Identities = 73/162 (45%), Positives = 86/162 (53%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VTAHA N LVPL++GAPD+AFPR+NN+ F +
Sbjct: 58 VTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAM 117
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMT 177
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
Q PLFV +V ITA A IT+LLTDRNLNT+F
Sbjct: 178 QYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTF 219
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 126 bits (304), Expect = 3e-28
Identities = 70/162 (43%), Positives = 88/162 (54%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N LVP+++G+PD+AFPR+NNI F +
Sbjct: 66 ITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSAL 125
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS S
Sbjct: 126 VEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQS 185
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
++PLFV ++ +TAF AGAIT+LLTDRN NTSF
Sbjct: 186 MYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSF 227
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 120 bits (289), Expect = 2e-26
Identities = 67/140 (47%), Positives = 79/140 (56%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N L+PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH
Sbjct: 81 NYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 141 GPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSL 200
Query: 432 XXXAGAITILLTDRNLNTSF 491
+ IT+LL DRN NTSF
Sbjct: 201 PVLSAGITMLLLDRNFNTSF 220
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 120 bits (289), Expect = 2e-26
Identities = 67/140 (47%), Positives = 79/140 (56%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N L+PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH
Sbjct: 81 NYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 141 GPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSL 200
Query: 432 XXXAGAITILLTDRNLNTSF 491
+ IT+LL DRN NTSF
Sbjct: 201 PVLSAGITMLLLDRNFNTSF 220
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 119 bits (287), Expect = 3e-26
Identities = 66/140 (47%), Positives = 80/140 (57%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N ++PL++GA D++FPRIN+I F +VE+GAGTG TVYPPLSS AH
Sbjct: 81 NYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G SVDLAIFSLHL ISS S ++PLFV A+ ITAF
Sbjct: 141 GPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSL 200
Query: 432 XXXAGAITILLTDRNLNTSF 491
+ IT+LL DRN NTSF
Sbjct: 201 PVLSAGITMLLMDRNFNTSF 220
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 118 bits (285), Expect = 5e-26
Identities = 67/162 (41%), Positives = 83/162 (51%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VT+HA N L+PL+LG+PD++FPR+NN+ F
Sbjct: 42 VTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNNMSFWLLIPSLLLLILSMF 101
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
+ G GTG TVYPPLS + H G SVDL IFSLHLAG SS +
Sbjct: 102 INVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFN 161
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
D++ LF +V ITA AGAIT+LLTDRN+NTSF
Sbjct: 162 MDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 118 bits (283), Expect = 9e-26
Identities = 68/135 (50%), Positives = 77/135 (57%)
Frame = +3
Query: 87 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 266
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 267 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 446
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 447 AITILLTDRNLNTSF 491
AIT+LLTDRN+NTSF
Sbjct: 124 AITMLLTDRNINTSF 138
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 114 bits (275), Expect = 9e-25
Identities = 63/140 (45%), Positives = 78/140 (55%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N ++PL++GA D AFPRINNI F +VE+GAGTG TVYPPL+S AH
Sbjct: 81 NYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHS 140
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G SVDLAIF+LH+ ISS + +LPLFV A+ ITA
Sbjct: 141 GPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTL 200
Query: 432 XXXAGAITILLTDRNLNTSF 491
+ +T+LL DRN NTSF
Sbjct: 201 PVLSAGVTMLLLDRNFNTSF 220
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 114 bits (274), Expect = 1e-24
Identities = 67/162 (41%), Positives = 79/162 (48%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N L+PL LG PD+ FPR+NNI +
Sbjct: 59 ITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGG 118
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIR 178
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+L LF AV ITA AG IT++LTDRN NTSF
Sbjct: 179 LHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSF 220
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 113 bits (271), Expect = 3e-24
Identities = 61/140 (43%), Positives = 75/140 (53%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T+YPPLS +H
Sbjct: 107 NFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHS 166
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
VDL IF LHL+GISS +L LF AV ITA
Sbjct: 167 SMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSL 226
Query: 432 XXXAGAITILLTDRNLNTSF 491
A AIT+LLTDRNLNTSF
Sbjct: 227 PVLAAAITMLLTDRNLNTSF 246
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 111 bits (268), Expect = 6e-24
Identities = 61/140 (43%), Positives = 72/140 (51%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N VP+++GAPD++FPR+NN F E G GTG TVYPPLSS +H
Sbjct: 84 NYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHS 143
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G SVDL IFS HL GI S LPLFV +V +T+F
Sbjct: 144 GASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAI 203
Query: 432 XXXAGAITILLTDRNLNTSF 491
A AIT+LL DRN NTSF
Sbjct: 204 PVLAAAITLLLFDRNFNTSF 223
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 111 bits (268), Expect = 6e-24
Identities = 61/162 (37%), Positives = 82/162 (50%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N LVPL +G+ D AFPRINN+ F +
Sbjct: 76 ITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCL 135
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+ +LPLFV +V ITA A +T+LL DRN NTSF
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSF 237
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 111 bits (268), Expect = 6e-24
Identities = 61/162 (37%), Positives = 82/162 (50%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N LVPL +G+ D AFPRINN+ F +
Sbjct: 76 ITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCL 135
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+ +LPLFV +V ITA A +T+LL DRN NTSF
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSF 237
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 111 bits (268), Expect = 6e-24
Identities = 61/162 (37%), Positives = 82/162 (50%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N LVPL +G+ D AFPRINN+ F +
Sbjct: 76 ITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCL 135
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+ +LPLFV +V ITA A +T+LL DRN NTSF
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSF 237
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 111 bits (268), Expect = 6e-24
Identities = 61/162 (37%), Positives = 82/162 (50%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N LVPL +G+ D AFPRINN+ F +
Sbjct: 76 ITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCL 135
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+ +LPLFV +V ITA A +T+LL DRN NTSF
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSF 237
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 105 bits (253), Expect = 4e-22
Identities = 61/147 (41%), Positives = 73/147 (49%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N LVP+++GAPD+AFPR+NNI F
Sbjct: 58 ITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAF 117
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAG 446
+LPLFV A+ +TA AG
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 105 bits (251), Expect = 7e-22
Identities = 62/162 (38%), Positives = 78/162 (48%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N L+PL+LGA D+AF R+NNI F +
Sbjct: 64 ITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSAL 123
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 124 VEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMK 183
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
++ +PLF AV TA A +T+ + DRN NTSF
Sbjct: 184 YENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSF 225
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 102 bits (245), Expect = 4e-21
Identities = 63/166 (37%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 98 ITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTF 157
Query: 186 VE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 353
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 158 VPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRA 216
Query: 354 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+ ++PLFV +V +TAF A AIT+LLTDRN T+F
Sbjct: 217 PGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTF 262
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 102 bits (244), Expect = 5e-21
Identities = 51/140 (36%), Positives = 76/140 (54%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N +PL++GAPD+AFPR+NN+ + +++ GAG G T YPP+S+
Sbjct: 186 NYFMPLMIGAPDMAFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVET 245
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
R+VD AIF++H++G SS + ++PLF +V +TA+
Sbjct: 246 SRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSL 305
Query: 432 XXXAGAITILLTDRNLNTSF 491
AGAIT+LLTDRN T+F
Sbjct: 306 PVLAGAITMLLTDRNFGTTF 325
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 94.3 bits (224), Expect = 1e-18
Identities = 60/166 (36%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N L+PL++G PD+AFPR+NNI F I
Sbjct: 87 ITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAI 146
Query: 186 VENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 353
+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 147 IEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRT 206
Query: 354 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+L LF + IT++LTDRN NTSF
Sbjct: 207 PGIKLHKLALF-------GWATWSSRSRYFLGITMVLTDRNFNTSF 245
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 82.6 bits (195), Expect = 4e-15
Identities = 47/140 (33%), Positives = 63/140 (45%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N +P++ G PD+ FPR+NN+ F + E G G G T+YP L H
Sbjct: 83 NYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHS 142
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
+ D +F++HL GISS SF LF+ A ITA
Sbjct: 143 SLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITL 202
Query: 432 XXXAGAITILLTDRNLNTSF 491
AG +T++L DRN NTSF
Sbjct: 203 PVLAGGVTLILCDRNFNTSF 222
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 81.0 bits (191), Expect = 1e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +3
Query: 87 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 266
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 267 LAIFS 281
LAI+S
Sbjct: 61 LAIYS 65
Score = 36.3 bits (80), Expect = 0.37
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +2
Query: 386 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYII 490
CM C +Y TCFS S+Y IIN K KY I
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFI 131
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 81.0 bits (191), Expect = 1e-14
Identities = 46/140 (32%), Positives = 63/140 (45%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N ++PL+LGAP++AFPR+N + F + G G+ T YPPLS
Sbjct: 91 NWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQP 149
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
S+D I LH GI S + DQ+ +FV +T+F
Sbjct: 150 ELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSV 209
Query: 432 XXXAGAITILLTDRNLNTSF 491
AG++ LL DRN NTSF
Sbjct: 210 PVLAGSLLFLLLDRNFNTSF 229
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 72.9 bits (171), Expect = 3e-12
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 1/163 (0%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+T HA N +PL++ D++ PR+NN+ +
Sbjct: 60 MTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFL 119
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 120 SSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALF 179
Query: 366 FDQL-PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
F L P+ + + T+ A +T+LL DR+ +TSF
Sbjct: 180 FMSLNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSF 222
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 72.5 bits (170), Expect = 5e-12
Identities = 51/138 (36%), Positives = 61/138 (44%)
Frame = +3
Query: 78 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 257
L PL +GAP +A PR+ N+ F + G G VYPP SS +AH
Sbjct: 72 LXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSG 131
Query: 258 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 437
+VDL IF LHLAGISS ++ LF
Sbjct: 132 AVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPV 191
Query: 438 XAGAITILLTDRNLNTSF 491
A AIT+L R N SF
Sbjct: 192 LAAAITMLXXXRXXNXSF 209
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.5 bits (170), Expect = 5e-12
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +3
Query: 225 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 404
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 405 TAFXXXXXXXXXAGAITILLTDR 473
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.5 bits (78), Expect = 0.65
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 59 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 184
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 66.5 bits (155), Expect = 3e-10
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAH 248
N L+PL++GA D+AFPR+N F G AG G T Y PLS+N+
Sbjct: 112 NLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGM 171
Query: 249 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 428
G L + ++ + G+SS ++ +LPL + + +TA
Sbjct: 172 PGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIWGLWLTAILNALF 231
Query: 429 XXXXAGAITILLTDRNLNTSF 491
A +LL DR+ T F
Sbjct: 232 VPVLGSAALLLLLDRSFGTEF 252
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 63.3 bits (147), Expect = 3e-09
Identities = 36/76 (47%), Positives = 42/76 (55%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VTAHA N LVPL++GAPD+AFPR+NN+ F
Sbjct: 59 VTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASST 118
Query: 186 VENGAGTG*TVYPPLS 233
VE GAGTG TVYPPL+
Sbjct: 119 VEAGAGTGWTVYPPLA 134
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 63.3 bits (147), Expect = 3e-09
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N +P++ G+P++A+PRIN+I E G GTG T+YPPLS+++
Sbjct: 85 NYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSL 144
Query: 252 GR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 428
+VD+ IF L ++G++S + L + ++ IT+
Sbjct: 145 SPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSGMLLLT 204
Query: 429 XXXXAGAITILLTDRNLNTSF 491
G + +LL+D + NT F
Sbjct: 205 LPVLTGGVLMLLSDLHFNTLF 225
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 62.1 bits (144), Expect = 7e-09
Identities = 37/140 (26%), Positives = 61/140 (43%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N L P++LG D+ +PR+N +E G+GTG T+YPPLS+++++
Sbjct: 88 NYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNV 147
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G +D IF L AGI+S D++ ++ +T+F
Sbjct: 148 G--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSL 205
Query: 432 XXXAGAITILLTDRNLNTSF 491
++ DR+ NT F
Sbjct: 206 PVVTAVFLMVFLDRHYNTMF 225
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 5e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 183 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 305
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 58.8 bits (136), Expect = 6e-08
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRF-XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 248
N L+P+++G +++ PR+N I F ++ +G T+YPPLS+ A
Sbjct: 90 NYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDAD 149
Query: 249 R-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 425
G ++DL++ +H+ GISS +F + ++ ++ +T+
Sbjct: 150 NIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIG 209
Query: 426 XXXXXAGAITILLTDRNLNTS 488
AIT LL DRN+N++
Sbjct: 210 SLPILGVAITGLLLDRNINST 230
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 58.4 bits (135), Expect = 8e-08
Identities = 39/100 (39%), Positives = 46/100 (46%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VTAH N LVPL+LGAPD+AFPR+NN+ F +
Sbjct: 42 VTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV 101
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 305
G + PL G SVDLAIF LHLAG+SS
Sbjct: 102 --KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 58.0 bits (134), Expect = 1e-07
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 1/141 (0%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAH 248
N +VPL +GA D+AFPR+N + + E+GA G T+Y PL++ I
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYT 147
Query: 249 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 428
G +DLA ++ L +S + ++P+F ++ T
Sbjct: 148 PGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWA 207
Query: 429 XXXXAGAITILLTDRNLNTSF 491
+LL DRNL T F
Sbjct: 208 FPPLMVGGALLLLDRNLGTEF 228
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 57.2 bits (132), Expect = 2e-07
Identities = 41/140 (29%), Positives = 58/140 (41%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N L+PL++GA D+AFPR+N + + I N T T YPP S N +
Sbjct: 38 NFLLPLMIGAKDVAFPRLNALSWWAFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--ND 95
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
L +F +HL G SS +F + LFV +
Sbjct: 96 AGVTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGV 155
Query: 432 XXXAGAITILLTDRNLNTSF 491
AGA+T+L D+ L T+F
Sbjct: 156 PSLAGAVTMLFLDKYLGTNF 175
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 57.2 bits (132), Expect = 2e-07
Identities = 49/148 (33%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXX--XXXXXXXXXXXIVE-NGAGTG*TVYPPLS--- 233
N L+PL++GA D+AFPRIN I F I E A TG T+Y PLS
Sbjct: 161 NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGE 220
Query: 234 --SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 407
N A+ G VDL + LHL+G+S+ S+ L +F +
Sbjct: 221 GMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQ 278
Query: 408 AFXXXXXXXXXAGAITILLTDRNLNTSF 491
+ AI +LL DRN TSF
Sbjct: 279 SGLILFAFPLLGSAIMMLLFDRNFGTSF 306
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 56.8 bits (131), Expect = 2e-07
Identities = 39/140 (27%), Positives = 56/140 (40%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N VPL++GA D+AFPR+N+ F + + G Y PLSS
Sbjct: 99 NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSS 158
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
+ VD I L + GI S S ++PLFV + + A
Sbjct: 159 LQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILAL 218
Query: 432 XXXAGAITILLTDRNLNTSF 491
A+ +LL DR L ++F
Sbjct: 219 PALNSALAMLLIDRWLGSAF 238
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 56.4 bits (130), Expect = 3e-07
Identities = 45/162 (27%), Positives = 65/162 (40%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VT H N L+P PD+ FPR+N + F +
Sbjct: 53 VTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL-----L 107
Query: 186 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 365
+ + A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 108 LFSMASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL-- 161
Query: 366 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+ L LF ++ + + A IT++LTD++L T F
Sbjct: 162 WYSLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCF 203
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 55.6 bits (128), Expect = 6e-07
Identities = 32/79 (40%), Positives = 38/79 (48%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N LVP+++GAPD+AFPR+NNI F
Sbjct: 58 ITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAF 117
Query: 186 VENGAGTG*TVYPPLSSNI 242
VE GAGTG TV LS I
Sbjct: 118 VEQGAGTGWTVKCKLSQII 136
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 53.2 bits (122), Expect = 3e-06
Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 4/166 (2%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VT HA N L+PL++GA D+AFP +N + +
Sbjct: 92 VTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFFFGGAFF 151
Query: 186 VE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 353
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 152 CDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTTIIQMRA 211
Query: 354 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
+ +LPL + A+ ITA A ++L DR + T F
Sbjct: 212 PGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGF 257
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 51.6 bits (118), Expect = 9e-06
Identities = 36/138 (26%), Positives = 54/138 (39%)
Frame = +3
Query: 78 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 257
LVPL++G IAFPR+N + V+ G G Y PLS G+
Sbjct: 98 LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGK 157
Query: 258 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 437
D+ + +S+ S D++PLFV ++ +T+F
Sbjct: 158 RADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPA 217
Query: 438 XAGAITILLTDRNLNTSF 491
A T L+ DR + T F
Sbjct: 218 IMIASTSLILDRLVGTHF 235
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 51.2 bits (117), Expect = 1e-05
Identities = 34/140 (24%), Positives = 52/140 (37%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N +VPL +GA D+AFP +NN+ F ++ G T Y PL+SN
Sbjct: 120 NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSP 179
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G + + L +AGI + + ++P+F IT
Sbjct: 180 GPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAF 239
Query: 432 XXXAGAITILLTDRNLNTSF 491
A+ +L DR F
Sbjct: 240 PVLTVALALLSFDRLFGAHF 259
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 50.8 bits (116), Expect = 2e-05
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 2/142 (1%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIA 245
N +PL++ A D+AFPRIN I F ++ A T T+Y PLS ++
Sbjct: 135 NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS 194
Query: 246 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 425
+VD+ + LHL G+S+ + L +F + +
Sbjct: 195 --SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILF 252
Query: 426 XXXXXAGAITILLTDRNLNTSF 491
A+ +LL DRN T+F
Sbjct: 253 AFPLFGSALIMLLLDRNFGTTF 274
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 50.0 bits (114), Expect = 3e-05
Identities = 36/140 (25%), Positives = 53/140 (37%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
VD I++L ++GI + +P+F
Sbjct: 185 DVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSF 244
Query: 432 XXXAGAITILLTDRNLNTSF 491
GA+ +L DR L+ F
Sbjct: 245 PILTGALAMLALDRYLDFHF 264
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 50.0 bits (114), Expect = 3e-05
Identities = 38/143 (26%), Positives = 56/143 (39%), Gaps = 3/143 (2%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNI 242
N L+P ++GAPD+AFP++N F G A +G YPP+S + +
Sbjct: 103 NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPL 162
Query: 243 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 422
H L I ++ L+GISS F ++P+FV
Sbjct: 163 GHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQL 222
Query: 423 XXXXXXAGAITILLTDRNLNTSF 491
G +LL D + TSF
Sbjct: 223 IGLPALTGGAVMLLFDLSFGTSF 245
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 50.0 bits (114), Expect = 3e-05
Identities = 43/140 (30%), Positives = 57/140 (40%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N +P+ L D+ PR+N++ G G G T+YPPLS
Sbjct: 178 NYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYPPLSI-WEGS 234
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G VD +FSLHLAG+SS SF+ + V A T+
Sbjct: 235 GFGVDYLMFSLHLAGVSS----LIGSVNFISTIFSRLSFN-CSIIVWAYLFTSVLLLLSL 289
Query: 432 XXXAGAITILLTDRNLNTSF 491
A IT+LL DRN T+F
Sbjct: 290 PVLASGITMLLFDRNFGTAF 309
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 50.0 bits (114), Expect = 3e-05
Identities = 30/79 (37%), Positives = 37/79 (46%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N L+PL+LGA D+AF R+NNI F +
Sbjct: 64 ITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSAL 123
Query: 186 VENGAGTG*TVYPPLSSNI 242
VE GAGTG TV SS +
Sbjct: 124 VEAGAGTGWTVKKICSSKM 142
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 49.6 bits (113), Expect = 4e-05
Identities = 36/140 (25%), Positives = 52/140 (37%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N +VPL++GA D+AFPR+N + V G Y PL+
Sbjct: 98 NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAP 157
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
VD I + L G++S + +++PLFV + AF
Sbjct: 158 TAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAF 217
Query: 432 XXXAGAITILLTDRNLNTSF 491
A LL DR+ T F
Sbjct: 218 PVLTVATIQLLFDRHFGTRF 237
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 49.6 bits (113), Expect = 4e-05
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 1/141 (0%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 248
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 249 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 428
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 429 XXXXAGAITILLTDRNLNTSF 491
A +LL +R+L F
Sbjct: 204 LPPLAAGAIMLLLERHLGMHF 224
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 49.2 bits (112), Expect = 5e-05
Identities = 42/166 (25%), Positives = 63/166 (37%), Gaps = 4/166 (2%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
VT H N L+PL +GA D+A +N + +
Sbjct: 106 VTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSSVIMFASIF 165
Query: 186 VENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 353
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 166 LETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITTVINLRV 225
Query: 354 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
SF +LPL + A ITA A +L+ DR+L TSF
Sbjct: 226 KGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSF 271
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 49.2 bits (112), Expect = 5e-05
Identities = 35/137 (25%), Positives = 52/137 (37%), Gaps = 1/137 (0%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAH 248
N ++PL +GAPD+AFPR+N F + GA G T+Y PLS I
Sbjct: 105 NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHS 164
Query: 249 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 428
G D+ I + GI S + ++P+F + + +
Sbjct: 165 PGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLI 224
Query: 429 XXXXAGAITILLTDRNL 479
A +L DR L
Sbjct: 225 FPLLLAAALGVLYDRKL 241
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 48.8 bits (111), Expect = 7e-05
Identities = 25/71 (35%), Positives = 34/71 (47%)
Frame = +3
Query: 6 VTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI 185
+TAHA N VP+++G+PD+AFPR+NNI F +
Sbjct: 62 ITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSAL 121
Query: 186 VENGAGTG*TV 218
VE G G+G TV
Sbjct: 122 VEVGCGSGWTV 132
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 48.4 bits (110), Expect = 9e-05
Identities = 41/140 (29%), Positives = 53/140 (37%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N L+PL++G D+AFPR+N + F V G T YPPLS
Sbjct: 94 NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKW 152
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G +L I SL L G SS +PLF A+ T+
Sbjct: 153 GE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLST 210
Query: 432 XXXAGAITILLTDRNLNTSF 491
A A+ +L D TSF
Sbjct: 211 PVLASALILLSFDLIAGTSF 230
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 47.6 bits (108), Expect = 2e-04
Identities = 37/136 (27%), Positives = 57/136 (41%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N ++PL+LGA D+AFPR+N + ++ G TG T Y P S AH
Sbjct: 110 NFMLPLMLGAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AHT 165
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
+V +F + G SS ++ ++PLFV A+ T+
Sbjct: 166 TTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYATS-CIQVLA 224
Query: 432 XXXAGAITILLTDRNL 479
G + +L+T NL
Sbjct: 225 TPVIGLLLVLVTVENL 240
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 47.2 bits (107), Expect = 2e-04
Identities = 37/140 (26%), Positives = 44/140 (31%)
Frame = +2
Query: 65 IWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YR 244
I KL P NK +KIL TPL Y N C K C + +NSLP Y
Sbjct: 62 IRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYL 121
Query: 245 T*RKIRRSCYFFTTFSXXXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXX 424
T R +F T CM +YS
Sbjct: 122 TLGPFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTS 181
Query: 425 XTTCFSWSYYNIINRSKLKY 484
+ S+YNI K KY
Sbjct: 182 FSPSIGSSHYNITYWPKPKY 201
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 46.4 bits (105), Expect = 3e-04
Identities = 33/113 (29%), Positives = 50/113 (44%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N L+P+++GA D+AFP++N + F +V+ GA TG T Y P S+ +
Sbjct: 103 NFLLPIMIGAKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYSTTTITK 161
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 410
V L F L G SS + +LPLFV ++ T+
Sbjct: 162 VVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATS 211
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 46.4 bits (105), Expect = 3e-04
Identities = 34/137 (24%), Positives = 50/137 (36%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G VD I++L L+G+ + +P+F
Sbjct: 184 GVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASF 243
Query: 432 XXXAGAITILLTDRNLN 482
A+ +L DR L+
Sbjct: 244 PILTAALALLTVDRYLD 260
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 45.2 bits (102), Expect = 8e-04
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 389 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYII 490
M C +YS +TC WSYYN IN SKLKYI+
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYIL 117
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 218
N L+PL++GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 81 NYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 44.4 bits (100), Expect = 0.001
Identities = 36/140 (25%), Positives = 50/140 (35%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 432 XXXAGAITILLTDRNLNTSF 491
L DR L+ F
Sbjct: 264 PPLTVVTLQLALDRYLDFHF 283
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 43.6 bits (98), Expect = 0.002
Identities = 26/106 (24%), Positives = 44/106 (41%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 389
VD +S+ ++GI + F+++ +F+
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFM 224
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 43.2 bits (97), Expect = 0.003
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 1/141 (0%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAH 248
N +VPL+LGA D+A PR+N + GA G T Y P S A
Sbjct: 92 NFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQ 148
Query: 249 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 428
VD + ++ L G SS S ++P++V +V +
Sbjct: 149 SESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFS 208
Query: 429 XXXXAGAITILLTDRNLNTSF 491
A ++L +R + S+
Sbjct: 209 LAGLTAATLLVLLERKIGLSW 229
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 41.9 bits (94), Expect = 0.007
Identities = 34/140 (24%), Positives = 51/140 (36%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N L PL+LG+ D+AFPR+ + + G Y PL+S
Sbjct: 116 NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSA 175
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G ++D+ + L GIS+ S D+LP+ V +
Sbjct: 176 GANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAV 235
Query: 432 XXXAGAITILLTDRNLNTSF 491
+ A +L DRN T F
Sbjct: 236 PSVSLAFLLLWLDRNAGTHF 255
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 41.5 bits (93), Expect = 0.010
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 1/141 (0%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N +PL++GA D+AFPR+N + + + T YPP S I H
Sbjct: 83 NYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHG 141
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
+ FS+ L G +S +++L +FV A + AF
Sbjct: 142 NTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIF 198
Query: 432 XXXAG-AITILLTDRNLNTSF 491
G A+T+L D+ + T F
Sbjct: 199 VPVLGTAVTMLTFDKYIGTHF 219
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 41.5 bits (93), Expect = 0.010
Identities = 26/112 (23%), Positives = 45/112 (40%)
Frame = +3
Query: 78 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 257
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 258 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 413
S D + + LA I+S S ++P+ + + TAF
Sbjct: 184 SADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAF 235
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 41.5 bits (93), Expect = 0.010
Identities = 35/139 (25%), Positives = 51/139 (36%), Gaps = 1/139 (0%)
Frame = +3
Query: 78 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 254
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 255 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 434
D A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 435 XXAGAITILLTDRNLNTSF 491
G +LL ++ S+
Sbjct: 231 EITGLFFLLLVGNLMHASY 249
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 41.5 bits (93), Expect = 0.010
Identities = 28/140 (20%), Positives = 53/140 (37%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N +VPL +GA D++FP +N + F + G T Y LS + +
Sbjct: 91 NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSK 148
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G +D + L ++G+ + ++ +LPLF + +
Sbjct: 149 GHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAF 208
Query: 432 XXXAGAITILLTDRNLNTSF 491
+ +++ DR T+F
Sbjct: 209 PPLTVGLALMMLDRLFGTNF 228
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 41.1 bits (92), Expect = 0.013
Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 4/144 (2%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNI 242
N L+PL++GA D+ FP +N + + V G G G T+YPP + S
Sbjct: 107 NYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGT 166
Query: 243 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXX 419
+ + L + SL L I + +LPL V + T
Sbjct: 167 PGQDWGIVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMAL 226
Query: 420 XXXXXXXAGAITILLTDRNLNTSF 491
G++ +LL DR L TSF
Sbjct: 227 LAFPALFVGSVMLLL-DRLLGTSF 249
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.023
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +3
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 432 XXXAGAITILLTDRNLNT 485
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 39.9 bits (89), Expect = 0.030
Identities = 30/138 (21%), Positives = 49/138 (35%)
Frame = +3
Query: 78 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 257
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 258 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 437
+D + IS+ S +++P+FV AV + +F
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPP 224
Query: 438 XAGAITILLTDRNLNTSF 491
A +L DR F
Sbjct: 225 LVIASLMLALDRMAGMHF 242
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 39.9 bits (89), Expect = 0.030
Identities = 26/111 (23%), Positives = 43/111 (38%)
Frame = +3
Query: 78 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 257
L+P +LG+ D+AFPR+ F + +G +YPPLSS + G
Sbjct: 98 LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGI 157
Query: 258 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 410
+ D + + IS+ S ++P+F +TA
Sbjct: 158 NSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTA 208
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 39.9 bits (89), Expect = 0.030
Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 2/142 (1%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS--SNIA 245
N LVPL +GA D+AFPR+N + + G T+Y PL+ + I
Sbjct: 89 NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNTPAYIP 148
Query: 246 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 425
G + +L + + +P+F ++ +T +
Sbjct: 149 GEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLTVWMMLF 208
Query: 426 XXXXXAGAITILLTDRNLNTSF 491
A+ IL +D L T++
Sbjct: 209 AFAALLAALMILASDHILGTTY 230
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 39.1 bits (87), Expect = 0.053
Identities = 22/103 (21%), Positives = 42/103 (40%)
Frame = +3
Query: 78 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 257
L+P +LG+ D+A+PR++ F + +G +YPPL+S + G
Sbjct: 98 LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGI 157
Query: 258 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 386
+ D + + IS+ S D++P++
Sbjct: 158 NSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIY 200
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 37.1 bits (82), Expect = 0.21
Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 3/143 (2%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP---PLSSNI 242
N L+PL++GA D+AFP++N + + G G T YP L+
Sbjct: 118 NFLIPLMIGADDMAFPKLNMLSYWFMWPAIACFGMSFKYAGGPAAGWTSYPVLADLAQAA 177
Query: 243 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 422
G + + + G SS +F +LP+ + + ITA
Sbjct: 178 PGSGTAQTYWLLGVTFVGFSSMMGSINYMTTIINMRAPGMTFFRLPMTIWGLFITAILQA 237
Query: 423 XXXXXXAGAITILLTDRNLNTSF 491
+ + DR T F
Sbjct: 238 FALPVLTAGGFMQVADRLFGTCF 260
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 33.5 bits (73), Expect = 2.6
Identities = 31/144 (21%), Positives = 51/144 (35%), Gaps = 4/144 (2%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG----TG*TVYPPLSSN 239
N +PL++GA D+AFPR+N + ++ G G Y L+S
Sbjct: 96 NYFLPLMIGARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSV 155
Query: 240 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 419
G D L L GI + + ++P+FV +T+
Sbjct: 156 QFTSGLGPDFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAII 215
Query: 420 XXXXXXXAGAITILLTDRNLNTSF 491
A+ +L+ DR +F
Sbjct: 216 IFAFPSVTVALIMLMFDRTFAANF 239
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 33.5 bits (73), Expect = 2.6
Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 5/145 (3%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NI 242
N +P+ +GA D+AFPR N + F + +G +G T Y LS+
Sbjct: 112 NYFLPIQIGAEDMAFPRFNMMSFWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGD 171
Query: 243 AHRGRSVDLAIFSLHLA--GISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 416
A G + ++ + +A I+S S ++P+ A IT+
Sbjct: 172 AGPGMAYGQTLWGISIAIFCIASLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCI 231
Query: 417 XXXXXXXXAGAITILLTDRNLNTSF 491
A +L DR TSF
Sbjct: 232 ALLAFAVLLPACILLCLDRVAGTSF 256
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 33.5 bits (73), Expect = 2.6
Identities = 29/140 (20%), Positives = 49/140 (35%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 251
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 252 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 431
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 432 XXXAGAITILLTDRNLNTSF 491
A+ +L DR L T F
Sbjct: 263 PILGVALAMLGADRYLGTHF 282
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 33.1 bits (72), Expect = 3.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 369 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 491
DQ+ LF ++ IT AG IT+LL+DRN N F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFF 52
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 4.6
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 472 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 350
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 32.7 bits (71), Expect = 4.6
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 72 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 248
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 249 RGRSVDLAIFSLHLAGISS 305
G +L +L L+G+SS
Sbjct: 139 YGLGTNLIQIALILSGLSS 157
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 6.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 149 TPLPYIINFKKNCRKWCRN 205
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
>UniRef50_Q0BZ17 Cluster: Amidohydrolase family/endoribonuclease
L-PSP; n=1; Hyphomonas neptunium ATCC 15444|Rep:
Amidohydrolase family/endoribonuclease L-PSP -
Hyphomonas neptunium (strain ATCC 15444)
Length = 755
Score = 31.9 bits (69), Expect = 8.0
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -1
Query: 214 VHPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISG-APSIRG 83
+H AP+S + + + ++R+G S ++ + GN I+G AP + G
Sbjct: 164 LHRYGAPYSILNVRVLDVRDGSLSAPSVVTVSGNVITGVAPYVEG 208
>UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1;
Bohadschia argus|Rep: Cytochrome oxidase subunit I -
Bohadschia argus
Length = 247
Score = 31.9 bits (69), Expect = 8.0
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +2
Query: 65 IWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YR 244
+W L P N+ ++L L + + K CRNRMN+LP
Sbjct: 28 LWNLTYTFNDSSPWYGIPPNEQNELLVSPSLFHSTPSISSSGKSCRNRMNNLPTLIQNNS 87
Query: 245 T*RKIRRSCYFFTTFS 292
R + YFF+T S
Sbjct: 88 PRRSVSSPRYFFSTSS 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 320,975,788
Number of Sequences: 1657284
Number of extensions: 5123052
Number of successful extensions: 12220
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 11125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12077
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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