Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_B04
(696 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 40 4e-04
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 36 0.006
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 35 0.013
SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone... 34 0.017
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 33 0.030
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 33 0.039
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 32 0.068
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 32 0.090
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 32 0.090
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 32 0.090
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 32 0.090
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 32 0.090
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 31 0.12
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 31 0.16
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 31 0.16
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 31 0.16
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 30 0.28
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.28
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 30 0.36
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 29 0.48
SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.48
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 29 0.48
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 29 0.48
SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|c... 29 0.64
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 29 0.64
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 29 0.64
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 29 0.84
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 29 0.84
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 28 1.1
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 28 1.1
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.5
SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces pomb... 28 1.5
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 28 1.5
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 27 1.9
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 27 1.9
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 27 1.9
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 27 1.9
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 27 1.9
SPAC3A12.13c |||translation initiation factor eIF3 complex subun... 27 2.6
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 27 2.6
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 27 3.4
SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr... 27 3.4
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 27 3.4
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 27 3.4
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 27 3.4
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 27 3.4
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 27 3.4
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 26 4.5
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 26 4.5
SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr... 26 4.5
SPCC4G3.10c |rhp42|rhp4b|DNA repair protein Rhp42|Schizosaccharo... 26 5.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 5.9
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 26 5.9
SPBC18H10.09 |||zinc finger protein, zf-CHY type|Schizosaccharom... 25 7.8
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit... 25 7.8
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 25 7.8
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 39.5 bits (88), Expect = 4e-04
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +2
Query: 299 KDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKT---- 466
+DL+ L+ L+++ + D E+ ++ +N + S ED + +D R+
Sbjct: 3993 EDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESDLVSKEDDNKALEDKDRQEKEDE 4052
Query: 467 EDKDSDETVFDVLEPDSKEEPKLPPPIVED 556
E+ D + D ++PD +E PPP ED
Sbjct: 4053 EEMSDDVGIDDEIQPDIQENNSQPPPENED 4082
Score = 31.9 bits (69), Expect = 0.090
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = +2
Query: 224 KEEQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSD-----D 388
KE+ + D+ + + D + E+ + E+N P EN++ +D D
Sbjct: 4034 KEDDNKALEDKDRQEKEDEEEMSDDVGIDDEIQPDIQENNSQPPPENEDHLDLPEDLKLD 4093
Query: 389 GFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKI 568
E ++ ED D ++ D + DE + D +P +E L I +D+
Sbjct: 4094 EKEGDVSKDSDLEDMDMEAADENKEEADAEKDEPMQDFEDP-LEENNTLDEDIQQDDFSD 4152
Query: 569 FLEAQE 586
E E
Sbjct: 4153 LAEDDE 4158
Score = 29.1 bits (62), Expect = 0.64
Identities = 24/102 (23%), Positives = 46/102 (45%)
Frame = +2
Query: 227 EEQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNI 406
E+ + +Q D L E +DE +D ++L + N D +EN +E +++ ED +
Sbjct: 4123 EKDEPMQDFEDPLEENNTLDEDIQQDDFSDLAEDDEKMNEDGFEENVQE--NEESTEDGV 4180
Query: 407 ETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPK 532
++ + E + +D A K ++ F E D + K
Sbjct: 4181 KSDEELEQGE-VPEDQAIDNHPKMDAKSTFASAEADEENTDK 4221
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 35.9 bits (79), Expect = 0.006
Identities = 25/104 (24%), Positives = 52/104 (50%)
Frame = +2
Query: 278 LVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNA 457
L+DEG++++ E + D D D+E +++ G + ++ET +S E+ S + +
Sbjct: 196 LIDEGEEEEEREEAELEFVSD--DEDEEEISDLEDWLGSDQSMETSESEEE--ESSESES 251
Query: 458 RKTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFLEAQEI 589
+ ED+D+ + D+K+ K P + E + E ++I
Sbjct: 252 DEDEDEDNKGKIRKRKTDDAKKSRKKRAPHIHIEYEQERENEKI 295
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 34.7 bits (76), Expect = 0.013
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Frame = +2
Query: 263 LSEMILVDEGKDKDLAAELDNYLYEDNRD------PDQENKEEIDSDDGFEDNIETIDSA 424
LS LVDE +++ ++ D L D D+E++EE +S+D + +DSA
Sbjct: 117 LSGNFLVDEEDEEEEESDEDYDLSPTEEDLVETVSGDEESEEESESEDNSASEEDELDSA 176
Query: 425 EDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFLEAQE 586
AK +Q ++T+D+ E + ++K++ K+ V+++K F E E
Sbjct: 177 -PAKKAQV-KKKRTKDESEQEEAASPKKNNTKKQ-KVEGTPVKEKKVAFAEKLE 227
>SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 195
Score = 34.3 bits (75), Expect = 0.017
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2
Query: 269 EMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEI 376
E+ +D+ DK+L+ DNY+ + + DP Q+NK+++
Sbjct: 109 EIKAIDQYVDKELSPMYDNYVNKPSNDPKQKNKQKL 144
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 33.5 bits (73), Expect = 0.030
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +2
Query: 251 EMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAED 430
E ++I +DE +D D E + EDN E++ + + D+ E++ T ++ E+
Sbjct: 1921 EASSHGDVISIDE-EDLDNQGEEFEWEDEDNASSGYEDELDYNEDEVGENDSTTFEAMEN 1979
Query: 431 AKNSQQDNARKTEDKDSDETV-FDVLEPD 514
A DN E+ D V D LE D
Sbjct: 1980 AFTETSDNDDHLEEADHVSPVEIDFLEND 2008
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 33.1 bits (72), Expect = 0.039
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Frame = +2
Query: 350 PDQENKEEIDSD-----DGFEDNIETID--SAEDAKNSQQDNARKTEDKDSDETVFDVLE 508
P++E+ ++++D D F + E +D S ++ +++N + E+ +SDE + E
Sbjct: 127 PEEEDSSDLENDFLYGADEFSSDEEEMDDISVTSSEEEEEENGARIEELNSDEEDAEQAE 186
Query: 509 PDSKEEPKLPPPIVEDEKKIFLEAQE 586
+ E+P + E K L+ +E
Sbjct: 187 EEILEKPVPKDEVAEKHSKDKLKKEE 212
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 32.3 bits (70), Expect = 0.068
Identities = 19/86 (22%), Positives = 37/86 (43%)
Frame = +2
Query: 230 EQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIE 409
E++ Q+ +++ L E K + L + + + D EN +I+ D DN+
Sbjct: 964 EEEVKQSVSEQVDSAQLTSEPKSESLPKSPEEKSDDTSNDVTTENTNDINGDSNM-DNVA 1022
Query: 410 TIDSAEDAKNSQQDNARKTEDKDSDE 487
T+D + DA ++ T +E
Sbjct: 1023 TVDKSTDAVDTSTATVAATTTTAEEE 1048
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 31.9 bits (69), Expect = 0.090
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 320 DNYL-YEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVF 496
DN L + D+ + D+ + EEI+S + F ++TI ++ + S + N K + V
Sbjct: 170 DNELKFNDSDEEDEVDDEEIESFNSFSRKMQTISNSR-YRGSPKPNIEKQSCSSESDRVS 228
Query: 497 DVLEPDSKEEPKLPPPIVEDEKKIFLEAQE 586
+ + + EE EDE+ +E E
Sbjct: 229 QISDDEEDEEGSADE---EDEEDSDVELSE 255
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 31.9 bits (69), Expect = 0.090
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 242 LQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRD---PDQENKEEIDSDDGFEDNIET 412
L + DK+ +L + + + +A L + ++ + D D E E+ S+D + +
Sbjct: 1281 LYSSGDKVRAHVLDVDSEKRRIALGLKSSYFDSDSDISMSDNEEDVEMRSEDQSDTSESE 1340
Query: 413 IDSAEDAKNSQQDNARKTEDKDSDE 487
+ S +D ++ + +N D+D +E
Sbjct: 1341 VGSKDDVQSEEVENLESAGDEDEEE 1365
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +2
Query: 377 DSDDGFEDNIETID-SAEDAKNSQQDNARKTEDKDSD--ETVFDVLEPDSKEEP 529
DSD DN E ++ +ED ++ + +D S+ E + + D +EEP
Sbjct: 1314 DSDISMSDNEEDVEMRSEDQSDTSESEVGSKDDVQSEEVENLESAGDEDEEEEP 1367
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 31.9 bits (69), Expect = 0.090
Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +2
Query: 239 SLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETID 418
S +M++ S ++ D K K+ + + + + D + E+D DD E + + I+
Sbjct: 644 SFSEDMNRESIHLICDVLKAKESVKDSEGMFAGEEVEEDAFGETEMDEDDFEEIDTDEIE 703
Query: 419 SAEDAKN-SQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFLE 577
D + S QD + E + + V + + K+E ++ DE+ + L+
Sbjct: 704 EQSDWEMISNQDASDNEELERKLDKVLEDADAKVKDEESSEEELMNDEQMLALD 757
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 31.9 bits (69), Expect = 0.090
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 335 EDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPD 514
E++ D EN ++ + DD F D + T S ++ RKTE+ +SD + +
Sbjct: 340 EESEFMDSENVDD-EEDDDFLD-VTTATSLQNKSTDYGSVKRKTENLNSDSDIQNKRTKS 397
Query: 515 SKEEPKLPP 541
+E LPP
Sbjct: 398 IEENNSLPP 406
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 31.9 bits (69), Expect = 0.090
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 338 DNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKD 478
+N + N ++ + +D E+N E D+ E+ + ++D+ ED+D
Sbjct: 82 ENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEEDED 128
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/85 (22%), Positives = 39/85 (45%)
Frame = +2
Query: 281 VDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNAR 460
VD + D + DN E+N + N+EE + ++ E++ E D + + + + R
Sbjct: 85 VDNVNNNDKKEDEDNV--EENEEEADANEEEEEDEEDDEEDEEDEDESGGGRRKRARHDR 142
Query: 461 KTEDKDSDETVFDVLEPDSKEEPKL 535
+ + D + V + E EE ++
Sbjct: 143 RNQFLDIEAEVDEDEEELEDEEDEI 167
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 31.5 bits (68), Expect = 0.12
Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +2
Query: 284 DEGK-DKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNAR 460
D GK + D+ A+ + + +++D ++KE D + E + + E D
Sbjct: 450 DTGKTETDVKAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEE 509
Query: 461 KTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFLEAQEI 589
KT+ K++ + V D+ E+P +EK ++++++
Sbjct: 510 KTDSKETADKVEQTDSKDTNEKPAKDDNKEANEKAEKVDSKDV 552
Score = 26.6 bits (56), Expect = 3.4
Identities = 26/125 (20%), Positives = 56/125 (44%), Gaps = 12/125 (9%)
Frame = +2
Query: 248 AEMDKLSEMILVDEGKDKDLAAELDNY--LYEDNRDPDQENKEEIDSDDGFED----NIE 409
+++ +E+ E K+ D A L+ + E+ D+ NK + D +D N +
Sbjct: 391 SDVSDTAEISEKTEAKNADSEANLEEKSDVGEEKESKDENNKASLHKDVEEKDTKITNED 450
Query: 410 TIDSAEDAKNSQQDNAR------KTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIF 571
T + D K + D+ KT+ K++++ V + ++ + K I D+K+
Sbjct: 451 TGKTETDVKAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEK 510
Query: 572 LEAQE 586
+++E
Sbjct: 511 TDSKE 515
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 31.1 bits (67), Expect = 0.16
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 353 DQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDE 487
DQ++ D++DG +D+I + +D +S ++ + ED D +E
Sbjct: 210 DQDDHVYDDTNDGTDDDINNNEYKDDESSSGSESYERDEDVDEEE 254
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 31.1 bits (67), Expect = 0.16
Identities = 23/99 (23%), Positives = 49/99 (49%)
Frame = +2
Query: 251 EMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAED 430
E ++ + DE K+ + E ++ +++ D + E K D G E+++E + +
Sbjct: 86 EPQTFADEFIDDEAKECE--GEEEDSVFDS--DEEHEVKPMFSDDSGDEEDLELANM--E 139
Query: 431 AKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPI 547
A + + D + E+K+++E + + P E P + PPI
Sbjct: 140 AMSRKLDEEAELEEKEAEEELHTNIHP---EAPTVLPPI 175
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 31.1 bits (67), Expect = 0.16
Identities = 21/93 (22%), Positives = 44/93 (47%)
Frame = +2
Query: 227 EEQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNI 406
E+ + DK E +++E +D+D+ A + E + + D E D ++ ED
Sbjct: 23 EDDDDADMDQDKNPEENVMNEKEDEDVDA-----VDEKSGEEDVEMDTMEDENENDEDTE 77
Query: 407 ETIDSAEDAKNSQQDNARKTEDKDSDETVFDVL 505
+T + E + +++ K + K S + +DV+
Sbjct: 78 QTSEKKETEETPKENPLEKLKQKASTASFYDVV 110
Score = 26.6 bits (56), Expect = 3.4
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +2
Query: 329 LYEDNRDPDQENKEEIDSDDGFEDNI------ETIDSAEDAKNSQQDNARKT--EDKDSD 484
L D P+ ++ ++D D E+N+ E +D A D K+ ++D T ++ ++D
Sbjct: 15 LPSDGLYPEDDDDADMDQDKNPEENVMNEKEDEDVD-AVDEKSGEEDVEMDTMEDENEND 73
Query: 485 ETVFDVLEPDSKEEPKLPPPIVEDEKK 565
E E EE P+ + ++K
Sbjct: 74 EDTEQTSEKKETEETPKENPLEKLKQK 100
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 30.3 bits (65), Expect = 0.28
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +2
Query: 338 DNRDPDQENKEEIDSDDGFEDNI-----ETIDSAEDAKNSQQDNARKTEDKDSDETVFDV 502
+ + PD+ + + DS + N+ E I SA+DAK +Q A + E+K +
Sbjct: 41 ETQSPDEPSPKTTDSTGARDANLSLKTQEPIVSADDAKGAQGKGADEKEEKK------ET 94
Query: 503 LEPDSKEEPKLPPPIVEDEKKIFLEAQE 586
++P EE K PP + E+K EA+E
Sbjct: 95 IQP--PEEVKTEPP--QPEEKEGKEAKE 118
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.28
Identities = 31/119 (26%), Positives = 52/119 (43%)
Frame = +2
Query: 230 EQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIE 409
+ K A DK S + +DE + E D +DN D + E+++ D E+
Sbjct: 1281 DDKQDTASKDKNS-LETIDEKMEDASKIEGDAKTGDDNEMEDLDKMEDLEKPDYAEEKDP 1339
Query: 410 TIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFLEAQE 586
I + ++ Q+ ++T SDE V LEP ++ + V D+ K+ LE E
Sbjct: 1340 YITVMSELRSRIQNVPKRTVTVYSDEGV-ATLEPGAQGDD------VVDKAKMILEKME 1391
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 29.9 bits (64), Expect = 0.36
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 290 GKDKDLAAELDNYLYEDNRDPDQENKEEIDSD-DGFEDNIETIDSAEDAKNSQQDNARKT 466
G D+ +AE + +D + Q+ + D G + T D+AED +NS+ DN +
Sbjct: 76 GSDQQYSAEAEANQEDDLNETSQQAPDPSSYDIRGQALSSATWDNAEDGENSKNDNYNEN 135
Query: 467 EDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFL 574
+ + + E D+ EE P ++ K+F+
Sbjct: 136 QSALTGSGAMESNE-DNAEETS---PFNREDGKMFI 167
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 29.5 bits (63), Expect = 0.48
Identities = 21/101 (20%), Positives = 39/101 (38%)
Frame = +2
Query: 221 LKEEQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFED 400
LK++ S E E E + + +E + E + E+ +SD +
Sbjct: 30 LKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSE 89
Query: 401 NIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKE 523
E +S ED++ S + + + +S+E E D E
Sbjct: 90 EEEETESEEDSEVSDESESESESESESEEESESEEESDESE 130
>SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 163
Score = 29.5 bits (63), Expect = 0.48
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +2
Query: 233 QKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIET 412
+K ++ ++ K E ++ GK+ D N + N+ D+ N+++ D+DD +D+
Sbjct: 84 KKKIERQLQKKKEAEKIEGGKNHD------NLKRKLNKVGDELNEQQSDTDDDDDDSKAR 137
Query: 413 IDSAEDAKNSQ 445
I S N+Q
Sbjct: 138 ITSRSKRANAQ 148
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 29.5 bits (63), Expect = 0.48
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 383 DDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVED 556
DD D+ + A+ + + A ED+ SD +D L S E K+ PI++D
Sbjct: 176 DDNETDSFRINELAKQIQETSL-GATTQEDESSDGICWDELSTTSPESSKVSEPIIQD 232
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 29.5 bits (63), Expect = 0.48
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 353 DQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDE 487
D+EN E D+ + E DSA++ S ++ ++ D D D+
Sbjct: 173 DKENLLESDASSSNDSESELTDSADNMNESDSESEIESSDSDHDD 217
>SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 449
Score = 29.1 bits (62), Expect = 0.64
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Frame = +2
Query: 224 KEEQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDN 403
K +K LQ ++ E+ + GK ++A + N D I+S ++
Sbjct: 50 KTSKKILQLAREQKEELDEEENGKPSQISAFISN-----GHQKDTLENPAIESSYEESEH 104
Query: 404 IETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPD-SKEEPKL 535
+ +E + +++ + E D+D +FD P S EE L
Sbjct: 105 ARNVSDSESITSQEEEEYEELEIDDADRDLFDRFLPTVSGEEGDL 149
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 29.1 bits (62), Expect = 0.64
Identities = 20/98 (20%), Positives = 47/98 (47%)
Frame = +2
Query: 233 QKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIET 412
+K +++E D+LS+ + ++ L A+L + + E +EE+ DD D +
Sbjct: 568 EKLMESESDRLSK-----KWENPQLLAQLKSRFITGSLLDSIEGQEEVSQDDEEGDFEDL 622
Query: 413 IDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEE 526
D + N ++++ + +++E+ +V +EE
Sbjct: 623 EDEENSSDNEMEESSGSSVTAENEESADEVDFQTEREE 660
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 29.1 bits (62), Expect = 0.64
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 335 EDNRDPDQENKEEIDSDDGFE 397
+D DPDQE + SDDG+E
Sbjct: 302 DDGSDPDQETSDTAASDDGWE 322
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 28.7 bits (61), Expect = 0.84
Identities = 18/95 (18%), Positives = 41/95 (43%)
Frame = +2
Query: 293 KDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTED 472
++ ++ + N+ YE + DP+ E ++ + FE+ + D +D + K
Sbjct: 154 EEDSVSTDFQNHDYEKSSDPETERLNDLREREEFEERLRRKDLEAATNEFVEDYSSKF-- 211
Query: 473 KDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFLE 577
S+E L D + KL + + ++ +L+
Sbjct: 212 -SSEELALRKLADDPESWRKLASELRKKSRQQYLK 245
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 28.7 bits (61), Expect = 0.84
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 266 SEMILVDEGKDKDLAAELDNYLYEDN---RDPDQENKEEIDSDDGFEDNIETIDSAEDAK 436
S+ I V G+D ++ L +Y +N + D E E + I+ + +K
Sbjct: 467 SDNIFVKPGEDLEIPL-LSDYSDSENISEKSSDDEEAFEKQVTSSYSSPIKVKSQGKSSK 525
Query: 437 NSQQDNARKTEDKDSDETVFDVLEPDS 517
S + R+ E D D VF P+S
Sbjct: 526 GSSGLDVREHEGSDDDAEVFVDRSPES 552
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 368 EEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEE 526
E D+D E+ E+ + +EDA + + ED++S E +D LE +++E
Sbjct: 951 EASDADPSDEEEEESEEYSEDASEEDGYSESEVEDEESGED-WDELERKARQE 1002
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 407 ETIDSAEDAKN---SQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPI 547
ETID +ED+KN ++ +N + S + FD D+++E K PI
Sbjct: 239 ETIDESEDSKNTLVTEDENDDSVFLESSSDKYFDSSSFDAEQEEKHDFPI 288
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +2
Query: 287 EGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKT 466
E K K A+ N + EDN D + + ++ DN + +++ ED S +A
Sbjct: 17 EVKKKKRQAKSKNSVAEDNVDRESNDGNNQVNEPTGNDNTQVVENTEDISASNVVSAEGA 76
Query: 467 EDKDSD 484
E D
Sbjct: 77 EASTGD 82
>SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 298
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 356 QENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEE 526
+E KEEI ++N + AE+A + T ++ +ET + E D K++
Sbjct: 4 EEQKEEIKDISSKQENSSEVPKAEEAGKVVESQKDTTSEEKKEETT-EKKEDDGKKD 59
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/80 (20%), Positives = 38/80 (47%)
Frame = +2
Query: 314 ELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETV 493
++ +Y+ D+ QE+ D +E+N + D+ + ++D+ ED++ E
Sbjct: 326 QITHYISLDDNLDVQESLGIFHYDPDYEENEKKYDAIKHEILGEEDDDENEEDEEDSEET 385
Query: 494 FDVLEPDSKEEPKLPPPIVE 553
+ E +S + K P +++
Sbjct: 386 SESEEDESVNDEK--PQVID 403
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 326 YLYEDNRDPDQENK-EEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDK 475
Y +D D EN+ EE DS F+D + E + NS+ +N +D+
Sbjct: 65 YALDDLPQVDVENEDEEEDSITSFQDEDDETSHQELSDNSEMNNRDDADDE 115
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 398 DNIETIDSAEDAKNSQQDN---ARKTEDKDSDETVFDVLEPDSKEEPK 532
+NIET+ S EDA++++ + K ED + + + + P ++P+
Sbjct: 192 ENIETLPSKEDAQHARVAHIPIEEKQEDSEKEGNIKEAFVPPKFDQPE 239
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 416 DSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEE 526
+ AE AK+ +QD +K +D + DE ++ + KE+
Sbjct: 9 EKAEAAKSRKQDEEKKKKDAEEDEKWSKGVKTNKKEQ 45
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 269 EMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQ 448
E + V++ + +DL E Y+ N + D+ + EE+D D+ E+ A DA+ ++
Sbjct: 59 EALDVEDEEGEDLFGEGMERDYQQNLELDRYDIEELDDDNDLEELDIGARRAVDARLRRR 118
Query: 449 D 451
D
Sbjct: 119 D 119
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 1.9
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Frame = +2
Query: 254 MDKLSEMILVDEGK----DKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDS 421
+++LS + +EGK D D+AA+ LYE D E S G + +
Sbjct: 197 INQLSRSLFYEEGKEFWDDYDIAAKEILSLYEQ----DPEGFVNPYSKRG----AAALAN 248
Query: 422 AEDAKNSQQDNARKTE---DKDSDETVFDVLEPDSKEE 526
+E+ K S+ + KT D DS V + L+PDS E+
Sbjct: 249 SENNKGSEAGVSAKTNPDMDSDSSAIVNEFLKPDSVED 286
>SPAC3A12.13c |||translation initiation factor eIF3 complex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 274
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/79 (18%), Positives = 34/79 (43%)
Frame = +2
Query: 290 GKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTE 469
GKD +++ ++ + ++ENKE + +D + S D +++ ++
Sbjct: 23 GKDSQSSSKPKKRFDDEEDEDEEENKESLQNDSHSVSQKSSSSSQNDQGSNKMTRIQQKI 82
Query: 470 DKDSDETVFDVLEPDSKEE 526
+ + E E +KEE
Sbjct: 83 QERNFEKAIKASEAAAKEE 101
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 27.1 bits (57), Expect = 2.6
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +2
Query: 383 DDGFEDNIETIDSAEDAKNSQQDNARK-TEDKDSDETVFDVLEPDSKEEPKLPPPIVEDE 559
DDG D + KN Q+ AR T E+ +PD P LPP EDE
Sbjct: 130 DDGKADFRGSSSGFVFMKNIHQNIARNSTVPNPVQESNSSSSQPDPLSFPYLPPTPAEDE 189
Query: 560 KK 565
K
Sbjct: 190 HK 191
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 26.6 bits (56), Expect = 3.4
Identities = 19/88 (21%), Positives = 35/88 (39%)
Frame = +2
Query: 227 EEQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNI 406
E+ S + D SE EG D ++ E + + SD E +
Sbjct: 196 EDSDSSSSSSDSESESS--SEGSDSSSSSSSS----ESESSSEDNDSSSSSSDSESESSS 249
Query: 407 ETIDSAEDAKNSQQDNARKTEDKDSDET 490
E DS+ + +S+ +++ K D S+ +
Sbjct: 250 EDSDSSSSSSDSESESSSKDSDSSSNSS 277
>SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 382
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 434 WHLQQNQWFQCYLQNHHRCQFL 369
WH NQ + CY++N FL
Sbjct: 126 WHFIPNQEYNCYVKNKTELSFL 147
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 403 VIFKTIIAVNFFFIFLIRVSIVF 335
VI ++I +NFFF +L R + F
Sbjct: 29 VIILSVIFINFFFFYLCRCCVYF 51
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 359 ENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSD 484
E KE + N+ DSAED ++ DN R + + +++
Sbjct: 504 ERKEGGSNSSSNISNVANFDSAEDDNDNDNDNDRDSNNNNNN 545
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 26.6 bits (56), Expect = 3.4
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +2
Query: 341 NRDPDQENKEE----IDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLE 508
N DP+ ++ EE DS++ ED+ + + +D +A KT +D L
Sbjct: 223 NEDPEYDSAEEDYLSTDSEEFSEDSDNSSEENKDTNEPSTKDAEKTVPEDVVN-----LR 277
Query: 509 PDSKEEPKLPPPIVEDE 559
+ K +P P E+E
Sbjct: 278 SEQKLQPSFGHPEFENE 294
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 359 ENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSD 484
E KE + N+ DSAED ++ DN R + + +++
Sbjct: 504 ERKEGGSNSSSNISNVANFDSAEDDNDNDNDNDRDSNNNNNN 545
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 422 AEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVED 556
AE + SQ + A D D+ + + D PKLPPP E+
Sbjct: 250 AERERESQSNYADHDLWADDDQATVNQRKLDYAPAPKLPPPSHEE 294
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 311 AELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDE 487
AE + + D D KE +D+D N + D E+ +Q+D A + E
Sbjct: 260 AEAEEKVSADASVQDIAEKESLDADKELATNDQEDDEEENQAETQKDGAISNNENMQSE 318
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 338 DNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKD 478
DN + NKE+I+ +D ET ++ + Q N+ TE+K+
Sbjct: 44 DNGEYVFTNKEDINMEDPNVKTDETKVETSESTSEQPSNSNVTEEKN 90
>SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 599
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/80 (21%), Positives = 34/80 (42%)
Frame = +2
Query: 353 DQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPK 532
D E + E+D DD ED + T D +S+ A ++ + + +
Sbjct: 245 DVEIQVEVDDDDEEEDEVVTDDDGTSNADSEVITASTLYERHT------AISSEMTSSTI 298
Query: 533 LPPPIVEDEKKIFLEAQEIL 592
L PP + D +++ + ++L
Sbjct: 299 LTPPSLTDTRQLMQQLDQLL 318
>SPCC4G3.10c |rhp42|rhp4b|DNA repair protein
Rhp42|Schizosaccharomyces pombe|chr 3|||Manual
Length = 686
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 335 EDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQD 451
E D D E K DD F+D+ +T + + + N Q+D
Sbjct: 81 EKGSDEDNE-KLGSSEDDEFDDDFDTWEQVDLSPNKQED 118
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 467 EDKDSDE--TVFDVLEPDSKEEPKLPPPIVEDEKKIFLEAQE 586
+D +SDE + + EP+S+ E + P +DE K E QE
Sbjct: 369 DDAESDEMHSPYSTHEPESEPEDQDEPSEKDDENKDVEEEQE 410
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 296 DKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKN 439
D + +L+ E N ++E KE D D ED+ +T + + +KN
Sbjct: 167 DDIMKRKLETEKLEANNKEEKEEKEGKDDKDDKEDSNDTKNDKKISKN 214
>SPBC18H10.09 |||zinc finger protein, zf-CHY
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 383 DDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIV 550
+DG ED+++ ++ +DA ++ D K + +E + P L PI+
Sbjct: 126 NDGKEDDLQNVNEPQDAYSNDHDIQSKDTELLGNEYCLEWKNPHLTNVGTLKAPIL 181
>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ysh1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 25.4 bits (53), Expect = 7.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 338 DNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKD 478
D + D EN EE D D FE + D ++ ++ +K+E+K+
Sbjct: 719 DVSEDDFEN-EESDDDKIFEQQTKIEDDVKNENKTEPVEEQKSEEKN 764
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 353 DQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDE 487
D E KEE ++ NIE S+ + K+ RK +D D D+
Sbjct: 302 DGEVKEEEENKVSSSSNIEASQSSLEVKDEAN---RKVDDDDEDD 343
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,830,079
Number of Sequences: 5004
Number of extensions: 31550
Number of successful extensions: 257
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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