Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B04
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    31   0.046
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         29   0.11 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    28   0.24 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   0.75 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   1.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   3.0  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.0  
AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    25   3.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   5.3  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    24   5.3  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 30.7 bits (66), Expect = 0.046
 Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
 Frame = +2

Query: 221  LKEEQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYL--YEDNRDPDQENKEEIDSDDGF 394
            +K  + +  + +D  + +I+ D   +KDL   L           D    +KE+ D DDG 
Sbjct: 1680 MKGRKGTNSSPLDGTTTIIIHDSEDEKDLDIILSGSGGGVGGGGDEGGSDKEDDDGDDGE 1739

Query: 395  EDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDS 517
            +D++E  D  E +     D+  +     S E V D   P S
Sbjct: 1740 DDDVEN-DDPELSSQLMVDSMNENASNCSWEAVDDRSAPSS 1779


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 308  AAELDNYLYEDNRDPDQENKEEIDSDDGFEDNIETIDSAEDAKNSQQDNARKTEDK--DS 481
            A E+++ +  D   P+  +  E+D +DG +     I   E    SQ D    T DK  DS
Sbjct: 1223 APEVEDEVELDKEAPNVRDAAEVDEEDGLKMENGVIAEVE---KSQVDGEDDTGDKKTDS 1279

Query: 482  DETVFDV 502
            D T+ ++
Sbjct: 1280 DGTLLEI 1286


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 347  DPDQENKEEIDS-DDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDS 517
            + D  +KEE D  DDG ED++E  D  E +     D+  +     S E V D   P S
Sbjct: 1724 EEDGSDKEEDDDDDDGEEDDVEN-DDPELSSQLMVDSMNENASNCSWEAVDDRSAPSS 1780


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 22/67 (32%), Positives = 34/67 (50%)
 Frame = +2

Query: 386  DGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKK 565
            D   +N+E   S + +KN Q+      +D+DS ET F   E   ++E      I +D++K
Sbjct: 827  DRINNNLEFERSKDTSKNVQRWERAVQDDEDSLET-FKQAEARQRQE------IEKDKEK 879

Query: 566  IFLEAQE 586
            I L  QE
Sbjct: 880  IELMKQE 886


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 386  DGFEDNIET-IDSAEDAKNSQQDNARKTEDKDSD 484
            DG +  ++  +D+AED +  +++   + ED+D +
Sbjct: 951  DGLQKEVKKEVDAAEDDEEEEEEEQEEEEDEDEE 984


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +2

Query: 224 KEEQKSLQAEMDKLS-EMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSDDGFED 400
           KEE  +   E +KLS E    + G D  +  +      +DN D D +     D  DG +D
Sbjct: 729 KEEGDNPDGEEEKLSHEPTPTEHGDDGFMDHD------KDNLDSDNDPMNISDDYDG-QD 781

Query: 401 NIETIDSAEDAKN-SQQDNARKTEDK 475
           +   I  AED +   +QD   +T D+
Sbjct: 782 SDTKIPVAEDDEGYEEQDTPGETFDE 807


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 449 DNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIF 571
           D  R     +SD ++ D ++ D   E  +PP   EDE  IF
Sbjct: 105 DGGRPAYSGNSDPSM-DQVKTDKPRELYIPPLPTEDESLIF 144


>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription factor
           Deformed protein.
          Length = 59

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -2

Query: 512 QVLRHRKQFHQNLYLLFFLRYLVDYFWHLQQNQ---WFQ 405
           Q+L   K+FH N YL    R  + +   L + Q   WFQ
Sbjct: 12  QILELEKEFHYNXYLTRRRRIEIAHTLVLSERQIKIWFQ 50


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = +2

Query: 224 KEEQKSLQAEMDKLSEM 274
           K++ K LQA++DKL+++
Sbjct: 408 KKQHKQLQAQLDKLTQI 424


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = -2

Query: 512 QVLRHRKQFHQNLYLLFFLRYLVDYFWHLQQNQ---WFQ 405
           Q+    K+FH N YL    R  +    HL + Q   WFQ
Sbjct: 64  QLTELEKEFHFNKYLTRARRIEIANALHLNETQVKIWFQ 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,321
Number of Sequences: 2352
Number of extensions: 7421
Number of successful extensions: 28
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)