Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B02
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.4  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +3

Query: 72  KPLVVVPTPSEKTVVLPLPKTSTVETLHGSLPIQGLK 182
           K   + P P +K +     K   +  + G  P+QG++
Sbjct: 3   KSTKIFPVPGDKNLHKSYSKMLILAQIFGFFPVQGVR 39


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +3

Query: 72  KPLVVVPTPSEKTVVLPLPKTSTVETLHGSLPIQGLK 182
           K   + P P +K +     K   +  + G  P+QG++
Sbjct: 3   KSTKIFPVPGDKNLHKSYSKMLILAQIFGFFPVQGVR 39


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 504 PLFIRHRTADEISTEKAVPVDTLRDPQHDDQ 596
           P F R R+  +     +  V+T+ DP+ DD+
Sbjct: 146 PSFARGRSLYDSRGRHSEIVETVYDPREDDR 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,498
Number of Sequences: 336
Number of extensions: 3535
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)