Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B01
         (717 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002896-1|AAH02896.1|  289|Homo sapiens zinc finger, matrin typ...    35   0.33 
AY037945-1|AAK71491.1|  288|Homo sapiens zinc finger protein WIG...    35   0.33 
AK022358-1|BAB14020.1|  289|Homo sapiens protein ( Homo sapiens ...    35   0.33 
AF355465-1|AAK83287.1|  288|Homo sapiens WIG-1/PAG608 protein pr...    35   0.33 
BC007775-1|AAH07775.1|  294|Homo sapiens zinc finger protein 346...    33   0.77 
AK131469-1|BAD18614.1|  319|Homo sapiens protein ( Homo sapiens ...    33   0.77 
AF083340-1|AAD52018.1|  294|Homo sapiens double-stranded RNA-bin...    33   0.77 
AK023904-1|BAB14719.1|  229|Homo sapiens protein ( Homo sapiens ...    31   5.4  

>BC002896-1|AAH02896.1|  289|Homo sapiens zinc finger, matrin type 3
           protein.
          Length = 289

 Score = 34.7 bits (76), Expect = 0.33
 Identities = 23/68 (33%), Positives = 30/68 (44%)
 Frame = +2

Query: 500 PAMRRPNRVERVKRYLMRCGLTKDSLKNIPREILHKIEPEYCGVCALELDSFGMSRLHYL 679
           P  R  N VE     ++       S K   R IL   E +YC +C     S  +++ HY 
Sbjct: 109 PPARMSNVVEPAATPVVPVPPQMGSFKPGGRVIL-ATENDYCKLCDASFSSPAVAQAHYQ 167

Query: 680 SKNHAKNL 703
            KNHAK L
Sbjct: 168 GKNHAKRL 175



 Score = 34.3 bits (75), Expect = 0.44
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 611 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLXKW 712
           +P YC +C + L+S   ++ HY  KNH K L  +
Sbjct: 68  KPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNY 101


>AY037945-1|AAK71491.1|  288|Homo sapiens zinc finger protein WIG1
           protein.
          Length = 288

 Score = 34.7 bits (76), Expect = 0.33
 Identities = 23/68 (33%), Positives = 30/68 (44%)
 Frame = +2

Query: 500 PAMRRPNRVERVKRYLMRCGLTKDSLKNIPREILHKIEPEYCGVCALELDSFGMSRLHYL 679
           P  R  N VE     ++       S K   R IL   E +YC +C     S  +++ HY 
Sbjct: 109 PPARMSNVVEPAATPVVPVPPQMGSFKPGGRVIL-ATENDYCKLCDASFSSPAVAQAHYQ 167

Query: 680 SKNHAKNL 703
            KNHAK L
Sbjct: 168 GKNHAKRL 175



 Score = 34.3 bits (75), Expect = 0.44
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 611 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLXKW 712
           +P YC +C + L+S   ++ HY  KNH K L  +
Sbjct: 68  KPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNY 101


>AK022358-1|BAB14020.1|  289|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12296 fis, clone MAMMA1001820, moderately
           similar to Rattus norvegicus mRNA for PAG608 gene. ).
          Length = 289

 Score = 34.7 bits (76), Expect = 0.33
 Identities = 23/68 (33%), Positives = 30/68 (44%)
 Frame = +2

Query: 500 PAMRRPNRVERVKRYLMRCGLTKDSLKNIPREILHKIEPEYCGVCALELDSFGMSRLHYL 679
           P  R  N VE     ++       S K   R IL   E +YC +C     S  +++ HY 
Sbjct: 109 PPARMSNVVEPAATPVVPVPPQMGSFKPGGRVIL-ATENDYCKLCDASFSSPAVAQAHYQ 167

Query: 680 SKNHAKNL 703
            KNHAK L
Sbjct: 168 GKNHAKRL 175



 Score = 34.3 bits (75), Expect = 0.44
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 611 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLXKW 712
           +P YC +C + L+S   ++ HY  KNH K L  +
Sbjct: 68  KPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNY 101


>AF355465-1|AAK83287.1|  288|Homo sapiens WIG-1/PAG608 protein
           protein.
          Length = 288

 Score = 34.7 bits (76), Expect = 0.33
 Identities = 23/68 (33%), Positives = 30/68 (44%)
 Frame = +2

Query: 500 PAMRRPNRVERVKRYLMRCGLTKDSLKNIPREILHKIEPEYCGVCALELDSFGMSRLHYL 679
           P  R  N VE     ++       S K   R IL   E +YC +C     S  +++ HY 
Sbjct: 109 PPARMSNVVEPAATPVVPVPPQMGSFKPGGRVIL-ATENDYCKLCDASFSSPAVAQAHYQ 167

Query: 680 SKNHAKNL 703
            KNHAK L
Sbjct: 168 GKNHAKRL 175



 Score = 34.3 bits (75), Expect = 0.44
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 611 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLXKW 712
           +P YC +C + L+S   ++ HY  KNH K L  +
Sbjct: 68  KPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNY 101


>BC007775-1|AAH07775.1|  294|Homo sapiens zinc finger protein 346
           protein.
          Length = 294

 Score = 33.5 bits (73), Expect = 0.77
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +2

Query: 530 RVKRYLMRCGLT--KDSLKNIP---REILHKIEPEYCGVCALELDSFGMSRLHYLSKNHA 694
           +VKRYL   G+   K   K +    +    K + + C +C +   S  +++ HYL K HA
Sbjct: 100 KVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHA 159

Query: 695 KNL 703
           KNL
Sbjct: 160 KNL 162


>AK131469-1|BAD18614.1|  319|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16637 fis, clone TESTI4025547, highly  similar
           to Homo sapiens double-stranded RNA-binding zinc finger
           protein JAZ (JAZ). ).
          Length = 319

 Score = 33.5 bits (73), Expect = 0.77
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +2

Query: 530 RVKRYLMRCGLT--KDSLKNIP---REILHKIEPEYCGVCALELDSFGMSRLHYLSKNHA 694
           +VKRYL   G+   K   K +    +    K + + C +C +   S  +++ HYL K HA
Sbjct: 125 KVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHA 184

Query: 695 KNL 703
           KNL
Sbjct: 185 KNL 187


>AF083340-1|AAD52018.1|  294|Homo sapiens double-stranded
           RNA-binding zinc finger protein JAZ protein.
          Length = 294

 Score = 33.5 bits (73), Expect = 0.77
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +2

Query: 530 RVKRYLMRCGLT--KDSLKNIP---REILHKIEPEYCGVCALELDSFGMSRLHYLSKNHA 694
           +VKRYL   G+   K   K +    +    K + + C +C +   S  +++ HYL K HA
Sbjct: 100 KVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHA 159

Query: 695 KNL 703
           KNL
Sbjct: 160 KNL 162


>AK023904-1|BAB14719.1|  229|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13842 fis, clone THYRO1000793. ).
          Length = 229

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 620 YCGVCALELDSFGMSRLHYLSKNHAKNLXK 709
           YCG+CA   ++  M++ HY  K H KN  +
Sbjct: 146 YCGLCAAWFNNPLMAQQHYDGKKHKKNAAR 175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,739,609
Number of Sequences: 237096
Number of extensions: 2055134
Number of successful extensions: 4076
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4075
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)