Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A23
         (574 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81524-1|AAB82735.1|   79|Homo sapiens cytochrome c oxidase subu...    40   0.005
M83186-1|AAA52166.1|   79|Homo sapiens cytochrome c oxidase subu...    40   0.005
CR542120-1|CAG46917.1|   79|Homo sapiens COX7A1 protein.               40   0.005
BT006924-1|AAP35570.1|   79|Homo sapiens cytochrome c oxidase su...    40   0.005
BC002757-1|AAH02757.1|   79|Homo sapiens cytochrome c oxidase su...    40   0.005
AF127789-1|AAF72747.1|   79|Homo sapiens cytochrome c oxidase po...    40   0.005
AF037372-1|AAB92616.1|   79|Homo sapiens cytochrome oxidase subu...    40   0.005
AC002984-2|AAB81547.1|   79|Homo sapiens COXK_HUMAN protein.           40   0.005
X15822-1|CAA33820.1|   83|Homo sapiens protein ( Human COX VIIa-...    40   0.008
CR542125-1|CAG46922.1|   83|Homo sapiens COX7A2 protein.               40   0.008
CR407646-1|CAG28574.1|   83|Homo sapiens COX7A2 protein.               40   0.008
BC133654-1|AAI33655.1|   83|Homo sapiens COX7A2 protein protein.       40   0.008
BC101828-1|AAI01829.1|   83|Homo sapiens cytochrome c oxidase su...    40   0.008
BC101826-1|AAI01827.1|   83|Homo sapiens cytochrome c oxidase su...    40   0.008
BC100854-1|AAI00855.1|   83|Homo sapiens cytochrome c oxidase su...    40   0.008
BC100853-1|AAI00854.1|   83|Homo sapiens cytochrome c oxidase su...    40   0.008
BC100852-1|AAI00853.1|   83|Homo sapiens cytochrome c oxidase su...    40   0.008
AL080250-3|CAI19899.1|  115|Homo sapiens cytochrome c oxidase su...    40   0.008
AF134406-1|AAF61396.1|   83|Homo sapiens cytochrome-c oxidase su...    40   0.008
AC004544-1|AAC12952.1|  106|Homo sapiens WUGSC:H_RG162B04.1 prot...    35   0.23 

>U81524-1|AAB82735.1|   79|Homo sapiens cytochrome c oxidase subunit
           VIIa-M protein.
          Length = 79

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVI 401
           +R KQ+LFQ DND+P++LKGG  D I
Sbjct: 26  VREKQKLFQEDNDIPLYLKGGIVDNI 51


>M83186-1|AAA52166.1|   79|Homo sapiens cytochrome c oxidase subunit
           VIIa protein.
          Length = 79

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVI 401
           +R KQ+LFQ DND+P++LKGG  D I
Sbjct: 26  VREKQKLFQEDNDIPLYLKGGIVDNI 51


>CR542120-1|CAG46917.1|   79|Homo sapiens COX7A1 protein.
          Length = 79

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVI 401
           +R KQ+LFQ DND+P++LKGG  D I
Sbjct: 26  VREKQKLFQEDNDIPLYLKGGIVDNI 51


>BT006924-1|AAP35570.1|   79|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 1 (muscle) protein.
          Length = 79

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVI 401
           +R KQ+LFQ DND+P++LKGG  D I
Sbjct: 26  VREKQKLFQEDNDIPLYLKGGIVDNI 51


>BC002757-1|AAH02757.1|   79|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 1 (muscle) protein.
          Length = 79

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVI 401
           +R KQ+LFQ DND+P++LKGG  D I
Sbjct: 26  VREKQKLFQEDNDIPLYLKGGIVDNI 51


>AF127789-1|AAF72747.1|   79|Homo sapiens cytochrome c oxidase
           polypeptide VIIa-heart precursor protein.
          Length = 79

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVI 401
           +R KQ+LFQ DND+P++LKGG  D I
Sbjct: 26  VREKQKLFQEDNDIPLYLKGGIVDNI 51


>AF037372-1|AAB92616.1|   79|Homo sapiens cytochrome oxidase subunit
           VIIa-H precursor protein.
          Length = 79

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVI 401
           +R KQ+LFQ DND+P++LKGG  D I
Sbjct: 26  VREKQKLFQEDNDIPLYLKGGIVDNI 51


>AC002984-2|AAB81547.1|   79|Homo sapiens COXK_HUMAN protein.
          Length = 79

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVI 401
           +R KQ+LFQ DND+P++LKGG  D I
Sbjct: 26  VREKQKLFQEDNDIPLYLKGGIVDNI 51


>X15822-1|CAA33820.1|   83|Homo sapiens protein ( Human COX VIIa-L
           mRNA for liver-specific cytochrome c oxidase (EC  ).
          Length = 83

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVIXXXXXXXXXXXXXVGVVQTIYSHAIPKKQ 488
           +  KQ+LFQ D+++P++LKGG AD +                +  +   + PKKQ
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVASFPKKQ 82


>CR542125-1|CAG46922.1|   83|Homo sapiens COX7A2 protein.
          Length = 83

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVIXXXXXXXXXXXXXVGVVQTIYSHAIPKKQ 488
           +  KQ+LFQ D+++P++LKGG AD +                +  +   + PKKQ
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVASFPKKQ 82


>CR407646-1|CAG28574.1|   83|Homo sapiens COX7A2 protein.
          Length = 83

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVIXXXXXXXXXXXXXVGVVQTIYSHAIPKKQ 488
           +  KQ+LFQ D+++P++LKGG AD +                +  +   + PKKQ
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVASFPKKQ 82


>BC133654-1|AAI33655.1|   83|Homo sapiens COX7A2 protein protein.
          Length = 83

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVIXXXXXXXXXXXXXVGVVQTIYSHAIPKKQ 488
           +  KQ+LFQ D+++P++LKGG AD +                +  +   + PKKQ
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVASFPKKQ 82


>BC101828-1|AAI01829.1|   83|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 2 (liver) protein.
          Length = 83

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVIXXXXXXXXXXXXXVGVVQTIYSHAIPKKQ 488
           +  KQ+LFQ D+++P++LKGG AD +                +  +   + PKKQ
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVASFPKKQ 82


>BC101826-1|AAI01827.1|   83|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 2 (liver) protein.
          Length = 83

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVIXXXXXXXXXXXXXVGVVQTIYSHAIPKKQ 488
           +  KQ+LFQ D+++P++LKGG AD +                +  +   + PKKQ
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVASFPKKQ 82


>BC100854-1|AAI00855.1|   83|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 2 (liver) protein.
          Length = 83

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVIXXXXXXXXXXXXXVGVVQTIYSHAIPKKQ 488
           +  KQ+LFQ D+++P++LKGG AD +                +  +   + PKKQ
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVASFPKKQ 82


>BC100853-1|AAI00854.1|   83|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 2 (liver) protein.
          Length = 83

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVIXXXXXXXXXXXXXVGVVQTIYSHAIPKKQ 488
           +  KQ+LFQ D+++P++LKGG AD +                +  +   + PKKQ
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVASFPKKQ 82


>BC100852-1|AAI00853.1|   83|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 2 (liver) protein.
          Length = 83

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVIXXXXXXXXXXXXXVGVVQTIYSHAIPKKQ 488
           +  KQ+LFQ D+++P++LKGG AD +                +  +   + PKKQ
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVASFPKKQ 82


>AL080250-3|CAI19899.1|  115|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 2 (liver) protein.
          Length = 115

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVIXXXXXXXXXXXXXVGVVQTIYSHAIPKKQ 488
           +  KQ+LFQ D+++P++LKGG AD +                +  +   + PKKQ
Sbjct: 60  VPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVASFPKKQ 114


>AF134406-1|AAF61396.1|   83|Homo sapiens cytochrome-c oxidase
           subunit VIIaL precursor protein.
          Length = 83

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVIXXXXXXXXXXXXXVGVVQTIYSHAIPKKQ 488
           +  KQ+LFQ D+++P++LKGG AD +                +  +   + PKKQ
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVADALLYRATMILTVGGTAYAIYELAVASFPKKQ 82


>AC004544-1|AAC12952.1|  106|Homo sapiens WUGSC:H_RG162B04.1
           protein.
          Length = 106

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = +3

Query: 324 IRRKQELFQRDNDLPVFLKGGPADVI 401
           +  KQ+LFQ D+ +P++LKGG AD +
Sbjct: 28  VPEKQKLFQEDDGIPLYLKGGIADAL 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,334,186
Number of Sequences: 237096
Number of extensions: 1871892
Number of successful extensions: 3906
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3906
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)