Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A21
         (421 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128463-1|AAM75056.1|  817|Drosophila melanogaster RE18773p pro...    28   4.4  
AE014296-277|AAS64930.1|  817|Drosophila melanogaster CG7852-PC,...    28   4.4  
AE014296-276|AAN11487.1| 1449|Drosophila melanogaster CG7852-PB,...    28   4.4  
AE014296-275|AAF47507.1| 1449|Drosophila melanogaster CG7852-PA,...    28   4.4  

>AY128463-1|AAM75056.1|  817|Drosophila melanogaster RE18773p
           protein.
          Length = 817

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 37  HVQQIRRFLRSIGRVSGRSKP*GSAGTSSAISPI 138
           HV +I  FLR  G + G   P GS   S + SP+
Sbjct: 555 HVPRIADFLRRKGGIRGAGSPVGSPTVSLSSSPV 588


>AE014296-277|AAS64930.1|  817|Drosophila melanogaster CG7852-PC,
           isoform C protein.
          Length = 817

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 37  HVQQIRRFLRSIGRVSGRSKP*GSAGTSSAISPI 138
           HV +I  FLR  G + G   P GS   S + SP+
Sbjct: 555 HVPRIADFLRRKGGIRGAGSPVGSPTVSLSSSPV 588


>AE014296-276|AAN11487.1| 1449|Drosophila melanogaster CG7852-PB,
           isoform B protein.
          Length = 1449

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 37  HVQQIRRFLRSIGRVSGRSKP*GSAGTSSAISPI 138
           HV +I  FLR  G + G   P GS   S + SP+
Sbjct: 555 HVPRIADFLRRKGGIRGAGSPVGSPTVSLSSSPV 588


>AE014296-275|AAF47507.1| 1449|Drosophila melanogaster CG7852-PA,
           isoform A protein.
          Length = 1449

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 37  HVQQIRRFLRSIGRVSGRSKP*GSAGTSSAISPI 138
           HV +I  FLR  G + G   P GS   S + SP+
Sbjct: 555 HVPRIADFLRRKGGIRGAGSPVGSPTVSLSSSPV 588


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,835,293
Number of Sequences: 53049
Number of extensions: 194582
Number of successful extensions: 753
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)