BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_A18
(529 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 119 7e-29
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 119 7e-29
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 118 9e-29
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 118 1e-28
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 31 0.032
DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor prot... 27 0.29
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 24 2.7
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 24 2.7
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 8.4
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 119 bits (286), Expect = 7e-29
Identities = 55/111 (49%), Positives = 76/111 (68%)
Frame = +2
Query: 83 QFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNP 262
Q+ L WNN +N++ LL L DVTLA E +++AH+ +LS CSPYF+++F N
Sbjct: 52 QYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPYFEQIFVENK 111
Query: 263 TQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLT 415
HPI++L+DV + +R LL FMYQGEVNV Q L +F+ TAE L+V+GLT
Sbjct: 112 HPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHNLQNFLKTAESLKVRGLT 162
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 119 bits (286), Expect = 7e-29
Identities = 55/111 (49%), Positives = 76/111 (68%)
Frame = +2
Query: 83 QFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNP 262
Q+ L WNN +N++ LL L DVTLA E +++AH+ +LS CSPYF+++F N
Sbjct: 52 QYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPYFEQIFVENK 111
Query: 263 TQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLT 415
HPI++L+DV + +R LL FMYQGEVNV Q L +F+ TAE L+V+GLT
Sbjct: 112 HPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHNLQNFLKTAESLKVRGLT 162
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 118 bits (285), Expect = 9e-29
Identities = 55/111 (49%), Positives = 76/111 (68%)
Frame = +2
Query: 83 QFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNP 262
Q+ L WNN +N++ LL L DVTLA E +++AH+ +LS CSPYF+++F N
Sbjct: 52 QYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPYFEQIFVENK 111
Query: 263 TQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLT 415
HPI++L+DV + +R LL FMYQGEVNV Q L +F+ TAE L+V+GLT
Sbjct: 112 HLHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHNLQNFLKTAESLKVRGLT 162
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 118 bits (284), Expect = 1e-28
Identities = 55/111 (49%), Positives = 75/111 (67%)
Frame = +2
Query: 83 QFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNP 262
Q+ L WNN N++ LL L DVTLA E +++AH+ +LS CSPYF+++F N
Sbjct: 4 QYCLRWNNHQPNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPYFEQIFVENK 63
Query: 263 TQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLT 415
HPI++L+DV + +R LL FMYQGEVNV Q L +F+ TAE L+V+GLT
Sbjct: 64 HPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHNLQNFLKTAESLKVRGLT 114
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 30.7 bits (66), Expect = 0.032
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 228 EHTDRTNLCACNNLPSAANVTSTRSPRD 145
+ DR L A N LPS +N+T+T +P D
Sbjct: 16 DSVDRLELAANNVLPSTSNITNTTAPLD 43
>DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor
protein.
Length = 344
Score = 27.5 bits (58), Expect = 0.29
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 5 SPSRSFSVQSFGSVPRRVVAIM-ASXAQFSLCWNNFHANMSAGFHGL 142
SP +SF+ S GS RRV+ ++ A F +CW FHA +G+
Sbjct: 252 SPRQSFA-NSQGS--RRVLKMLVAVVVAFFICWAPFHAQRLVYIYGV 295
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 24.2 bits (50), Expect = 2.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 81 HNFHYAGTISTQICQQAF 134
H Y GT+S +C++A+
Sbjct: 46 HGLKYIGTVSLTLCERAY 63
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 24.2 bits (50), Expect = 2.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 81 HNFHYAGTISTQICQQAF 134
H Y GT+S +C++A+
Sbjct: 46 HGLKYIGTVSLTLCERAY 63
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.6 bits (46), Expect = 8.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 49 TSRRRYHGVGRTIFTMLEQFPRKYVSR 129
T ++Y G+ +T+L ++ R+Y R
Sbjct: 1795 TENKQYQGLPGKEYTVLGKYKRRYAMR 1821
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,352
Number of Sequences: 2352
Number of extensions: 8662
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -