Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_A17
(779 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 146 1e-35
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 146 1e-35
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 120 8e-28
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 101 7e-22
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 73 2e-13
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 67 1e-11
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 66 2e-11
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 64 1e-10
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 62 5e-10
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 60 1e-09
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 58 7e-09
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 57 1e-08
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 57 2e-08
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 56 3e-08
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 56 3e-08
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 56 3e-08
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 55 5e-08
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 55 6e-08
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 55 6e-08
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 54 8e-08
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 54 1e-07
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 54 1e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 54 1e-07
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 53 2e-07
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 53 2e-07
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 52 4e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 52 4e-07
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 52 6e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 52 6e-07
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 52 6e-07
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 52 6e-07
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 52 6e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 52 6e-07
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 48 7e-06
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 48 9e-06
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 47 1e-05
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 47 1e-05
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 47 2e-05
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 47 2e-05
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 46 2e-05
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 46 3e-05
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 46 4e-05
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 46 4e-05
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 46 4e-05
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 46 4e-05
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 46 4e-05
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 45 5e-05
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 45 5e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 45 5e-05
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 45 7e-05
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 45 7e-05
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 45 7e-05
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 44 9e-05
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 44 9e-05
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 44 9e-05
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 44 1e-04
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 44 1e-04
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 44 1e-04
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 44 2e-04
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 44 2e-04
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 44 2e-04
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 44 2e-04
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 44 2e-04
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 44 2e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 43 2e-04
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 43 2e-04
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 43 2e-04
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 43 3e-04
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 43 3e-04
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 42 3e-04
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 42 3e-04
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 42 3e-04
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 42 3e-04
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 42 3e-04
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 42 6e-04
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 42 6e-04
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 42 6e-04
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 41 8e-04
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 41 8e-04
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 41 8e-04
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 41 8e-04
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 41 8e-04
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 41 8e-04
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 41 8e-04
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 41 8e-04
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 40 0.001
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 40 0.001
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 40 0.001
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 40 0.002
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 40 0.002
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 40 0.002
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 40 0.002
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 40 0.002
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 40 0.002
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 40 0.002
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 40 0.002
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 39 0.003
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 39 0.003
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 39 0.003
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 39 0.004
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 39 0.004
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 39 0.004
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 39 0.004
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 38 0.006
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 38 0.006
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 38 0.006
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 38 0.006
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 38 0.006
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 38 0.007
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 38 0.007
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 38 0.007
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 38 0.007
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 38 0.007
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 38 0.007
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 38 0.010
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 38 0.010
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 38 0.010
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 38 0.010
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 37 0.013
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 37 0.013
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 37 0.013
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 37 0.013
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 37 0.017
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 37 0.017
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 37 0.017
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 36 0.023
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 36 0.023
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 36 0.030
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 36 0.030
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 36 0.030
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 36 0.040
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 36 0.040
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 36 0.040
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 36 0.040
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 35 0.053
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 35 0.053
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 35 0.053
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 35 0.053
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 35 0.053
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 35 0.053
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 35 0.053
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 35 0.070
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 35 0.070
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 35 0.070
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 35 0.070
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 34 0.092
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 34 0.092
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 34 0.092
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 34 0.092
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 34 0.12
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 34 0.12
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 34 0.12
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 34 0.12
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 33 0.16
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 33 0.16
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 33 0.16
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 33 0.16
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 33 0.21
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 32 0.37
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 32 0.37
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 32 0.37
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 32 0.49
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 32 0.49
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 32 0.49
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 32 0.49
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 32 0.49
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 32 0.49
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 32 0.49
At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3 ... 31 0.65
At1g26140.1 68414.m03191 hypothetical protein 31 0.65
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 31 0.86
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 31 0.86
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 31 0.86
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 31 0.86
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 31 0.86
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 31 0.86
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 31 0.86
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 31 0.86
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 31 0.86
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 31 0.86
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 31 1.1
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 31 1.1
At1g36370.1 68414.m04518 glycine hydroxymethyltransferase, putat... 31 1.1
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 30 1.5
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 30 1.5
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 30 1.5
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 30 1.5
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 30 1.5
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 30 1.5
At1g22020.1 68414.m02755 glycine hydroxymethyltransferase, putat... 30 1.5
At3g45290.1 68416.m04890 seven transmembrane MLO family protein ... 30 2.0
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 29 2.6
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 29 2.6
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 2.6
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 29 2.6
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 29 2.6
At5g14720.1 68418.m01727 protein kinase family protein contains ... 29 3.5
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 29 3.5
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 29 3.5
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 29 3.5
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 29 3.5
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 29 3.5
At5g05570.1 68418.m00605 transducin family protein / WD-40 repea... 29 4.6
At1g72650.2 68414.m08402 myb family transcription factor contain... 29 4.6
At1g72650.1 68414.m08401 myb family transcription factor contain... 29 4.6
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 29 4.6
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 29 4.6
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 29 4.6
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 28 6.0
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 28 6.0
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 28 6.0
At4g11450.1 68417.m01843 expressed protein 28 8.0
At2g44030.1 68415.m05474 kelch repeat-containing F-box family pr... 28 8.0
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 146 bits (355), Expect = 1e-35
Identities = 79/196 (40%), Positives = 114/196 (58%), Gaps = 2/196 (1%)
Frame = +1
Query: 172 MKFAIPEISWHNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLST--TETGSVHLE 345
MK +ISWH+ PVL+VDF P + LA+ G D + +W +++ E +
Sbjct: 1 MKGGTIQISWHDGKPVLTVDFHPISG-----LLATAGADYDIKLWLINSGQAEKKVPSVS 55
Query: 346 VAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVY 525
+ LT H AVN +R+SP+G+LLASG D +FIWK L P+ + ++W V+
Sbjct: 56 YQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWK-----LHPS-----ETNQSWKVH 105
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK 705
K+L H +DVLD+ WS D + L SGSVDN I+WD+++ IL H +VQGV WDP
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 165
Query: 706 GQYITSTSTDRVFRAF 753
+Y+ S S+DR R +
Sbjct: 166 AKYVASLSSDRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 146 bits (355), Expect = 1e-35
Identities = 79/196 (40%), Positives = 114/196 (58%), Gaps = 2/196 (1%)
Frame = +1
Query: 172 MKFAIPEISWHNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLST--TETGSVHLE 345
MK +ISWH+ PVL+VDF P + LA+ G D + +W +++ E +
Sbjct: 1 MKGGTIQISWHDGKPVLTVDFHPISG-----LLATAGADYDIKLWLINSGQAEKKVPSVS 55
Query: 346 VAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVY 525
+ LT H AVN +R+SP+G+LLASG D +FIWK L P+ + ++W V+
Sbjct: 56 YQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWK-----LHPS-----ETNQSWKVH 105
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK 705
K+L H +DVLD+ WS D + L SGSVDN I+WD+++ IL H +VQGV WDP
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 165
Query: 706 GQYITSTSTDRVFRAF 753
+Y+ S S+DR R +
Sbjct: 166 AKYVASLSSDRTCRIY 181
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 120 bits (290), Expect = 8e-28
Identities = 68/180 (37%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = +1
Query: 202 HNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAV 381
H + S+D QP E R A+GG D + L +T + A L H +V
Sbjct: 11 HEGLQIFSIDVQPNGE-----RFATGGGDHKSVDKDLQNIDTKE---RLLATLRDHFGSV 62
Query: 382 NVVRWSPNGQLLASGDDESIIFIWKQKLEE-LSPATEGEEQYKETWVVYKTLRGHMEDVL 558
N VRW+ N + +ASG D+ +I I ++K + GE E W TLRGH DV+
Sbjct: 63 NCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVV 122
Query: 559 DISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDR 738
D++WS D S LASGS+DN + +W++ TT+L H V+GV WDP G +I S S D+
Sbjct: 123 DLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDK 182
Score = 46.8 bits (106), Expect = 2e-05
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Frame = +1
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
L H V + WSP+ +LASG ++ + IW + T + LR
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMR----------------TGMCTTVLR 157
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWD------IHRARYTTILSDHKGFVQGVCWD 699
GH+ V ++W GS +AS S D +I+W HR S F + + W
Sbjct: 158 GHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTFFRRLGWS 217
Query: 700 PKGQYITST 726
P G ++T+T
Sbjct: 218 PCGHFLTTT 226
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/81 (32%), Positives = 38/81 (46%)
Frame = +1
Query: 250 PNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGD 429
P+D + LASG D+ V IW + T +V L H V V W P G +AS
Sbjct: 128 PDDSM-LASGSLDNTVHIWNMRTGMCTTV-------LRGHLSLVKGVTWDPIGSFIASQS 179
Query: 430 DESIIFIWKQKLEELSPATEG 492
D+ + IW+ ++ T+G
Sbjct: 180 DDKTVIIWRTSDWGMAHRTDG 200
Score = 35.1 bits (77), Expect = 0.053
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +1
Query: 505 KETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIH----RARYTTILSDHK 672
K WV ++ L+ + I +G + A+G D+K + D+ + R L DH
Sbjct: 5 KPFWVKHEGLQ-----IFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHF 59
Query: 673 GFVQGVCWDPKGQYITSTSTDRVFR 747
G V V W +Y+ S S D+V +
Sbjct: 60 GSVNCVRWAKNSRYVASGSDDQVIQ 84
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 101 bits (241), Expect = 7e-22
Identities = 50/115 (43%), Positives = 70/115 (60%)
Frame = +1
Query: 409 QLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQ 588
+LLASG D +FIWK L P+ + ++W V+K+L H +DVLD+ WS D +
Sbjct: 18 ELLASGADGGELFIWK-----LHPS-----ETNQSWKVHKSLSFHRKDVLDLQWSPDDAY 67
Query: 589 LASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAF 753
L SGSVDN I+WD+++ IL H +VQGV WDP +Y+ S S+DR R +
Sbjct: 68 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
LASG + IW L +ET +V L+ H+K V ++WSP+ L SG ++
Sbjct: 20 LASGADGGELFIWKLHPSETNQ-SWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCI 78
Query: 448 IW 453
IW
Sbjct: 79 IW 80
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 73.3 bits (172), Expect = 2e-13
Identities = 52/181 (28%), Positives = 79/181 (43%)
Frame = +1
Query: 205 NRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVN 384
N + +++ K + + P RL SG D + +W SV + LT HQ+ VN
Sbjct: 311 NEEKQKALERYNKTKGDSPERLVSGSDDFTMFLW------EPSVSKQPKKRLTGHQQLVN 364
Query: 385 VVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDI 564
V +SP+G+ +AS + + +W G+ RGH+ V +
Sbjct: 365 HVYFSPDGKWIASASFDKSVRLWN--------GITGQ--------FVTVFRGHVGPVYQV 408
Query: 565 SWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVF 744
SWS D L SGS D+ L +W+I + L H V V W P G+ + S DRV
Sbjct: 409 SWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVL 468
Query: 745 R 747
+
Sbjct: 469 K 469
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK 705
+T+ GH E VL +S+S DG QLASGS D + +WD++ HK +V V W P
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 706 GQYITSTS 729
G+++ S S
Sbjct: 163 GKHLVSGS 170
Score = 59.3 bits (137), Expect = 3e-09
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H +AV V +SP+G+ LASG ++ + +W + Y ET + T +GH
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLW--------------DLYTETPLF--TCKGHK 151
Query: 547 EDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYT-TILSDHKGFVQGVCWDPK------ 705
VL ++WS DG L SGS ++ W+ + + L+ HK ++ G+ W+P
Sbjct: 152 NWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPC 211
Query: 706 GQYITSTSTDRVFRAFDVSTXKVV 777
+++TS S D R +D++ K +
Sbjct: 212 RRFVTS-SKDGDARIWDITLKKSI 234
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/83 (28%), Positives = 41/83 (49%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK 705
K L GH + V + +S DG +AS S D + +W+ ++ T+ H G V V W
Sbjct: 354 KRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSAD 413
Query: 706 GQYITSTSTDRVFRAFDVSTXKV 774
+ + S S D + +++ T K+
Sbjct: 414 SRLLLSGSKDSTLKIWEIRTKKL 436
Score = 48.4 bits (110), Expect = 5e-06
Identities = 57/194 (29%), Positives = 78/194 (40%), Gaps = 5/194 (2%)
Frame = +1
Query: 211 DPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVV 390
+ VL V F P D +LASG D+ V +W L TET + H+ V V
Sbjct: 110 EAVLCVSFSP-----DGKQLASGSGDTTVRLWDL-YTETPLFTCK------GHKNWVLTV 157
Query: 391 RWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISW 570
WSP+G+ L SG I W K EL EG L GH + + ISW
Sbjct: 158 AWSPDGKHLVSGSKSGEICCWNPKKGEL----EG-----------SPLTGHKKWITGISW 202
Query: 571 -----SMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTD 735
S + + S D +WDI + LS H V V W G I + S D
Sbjct: 203 EPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQD 261
Query: 736 RVFRAFDVSTXKVV 777
+ ++ + K++
Sbjct: 262 CTIKMWETTQGKLI 275
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/87 (29%), Positives = 41/87 (47%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H V V WS + +LL SG +S + IW+ + ++L + L GH
Sbjct: 401 HVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLK----------------QDLPGHA 444
Query: 547 EDVLDISWSMDGSQLASGSVDNKLIVW 627
++V + WS DG ++ SG D L +W
Sbjct: 445 DEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +1
Query: 256 DPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDE 435
D L SG DS + IW + T + + DL H V V WSP+G+ + SG +
Sbjct: 413 DSRLLLSGSKDSTLKIWEIRTKK-------LKQDLPGHADEVFAVDWSPDGEKVVSGGKD 465
Query: 436 SIIFIWK 456
++ +WK
Sbjct: 466 RVLKLWK 472
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 67.3 bits (157), Expect = 1e-11
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Frame = +1
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
L+ H AV ++++P G L+ASG + IF+W+ G+ + + L+
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWR---------VHGDCKN------FMVLK 93
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG-QY 714
GH +LD+ W+ DGSQ+ S S D + WD+ + +++H FV C +G
Sbjct: 94 GHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPL 153
Query: 715 ITSTSTDRVFRAFDV 759
I S S D + +D+
Sbjct: 154 IISGSDDGTAKLWDM 168
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +1
Query: 478 PATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIH-RARYTT 654
P G+ + L GH V + ++ G+ +ASGS D ++ +W +H +
Sbjct: 31 PGPNGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFM 90
Query: 655 ILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
+L HK + + W G I S S D+ RA+DV T K +
Sbjct: 91 VLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQI 131
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIH----RARYTTILSDHK-GFVQGV- 690
TL GH + + +S S DGS L + +DNKL VWD+ + R I H+ F + +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 691 -C-WDPKGQYITSTSTDRVFRAFDVSTXKVV 777
C W P G +T+ S+DR+ +D ++ + +
Sbjct: 277 KCSWSPDGTKVTAGSSDRMVHIWDTTSRRTI 307
Score = 50.4 bits (115), Expect = 1e-06
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Frame = +1
Query: 265 RLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESII 444
++ +GG D+ V +W L E L HQ + + SP+G L + ++ +
Sbjct: 194 KIFTGGVDNDVKVWDLRKGEA-------TMTLEGHQDTITGMSLSPDGSYLLTNGMDNKL 246
Query: 445 FIWKQKLEELSPATEGEEQYKETWVVYKTLRGHME-DVLDISWSMDGSQLASGSVDNKLI 621
+W ++ P K +++ + + E ++L SWS DG+++ +GS D +
Sbjct: 247 CVW-----DMRPYAPQNRCVK----IFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVH 297
Query: 622 VWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDR 738
+WD R L H G V + P I S S+D+
Sbjct: 298 IWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDK 336
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +1
Query: 562 ISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV 741
+S+S ++ +G VDN + VWD+ + T L H+ + G+ P G Y+ + D
Sbjct: 186 VSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNK 245
Query: 742 FRAFDV 759
+D+
Sbjct: 246 LCVWDM 251
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 66.5 bits (155), Expect = 2e-11
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Frame = +1
Query: 316 TTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGE 495
T++T + L H V WSP+ LLASG ++ IW G
Sbjct: 247 TSQTSHIPNSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGR 306
Query: 496 EQYKETWVVYKTLRGHM----EDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILS 663
++ K +G +DV + W+ +G+ LA+GS D + +W ++ +T LS
Sbjct: 307 NINA---LILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGELIST-LS 362
Query: 664 DHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
HKG + + W+ KG Y+ + S DR +DV
Sbjct: 363 KHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDV 394
Score = 64.9 bits (151), Expect = 6e-11
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 9/197 (4%)
Frame = +1
Query: 214 PVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVR 393
P L VD++ + + A+ TDS + + + T A T HQ VN V+
Sbjct: 409 PTLDVDWR------NNVSFATSSTDSMIYLCKIGETRP-------AKTFTGHQGEVNCVK 455
Query: 394 WSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS 573
W P G LLAS D+S IW K + T+V LR H +++ I WS
Sbjct: 456 WDPTGSLLASCSDDSTAKIWNIK--------------QSTFV--HDLREHTKEIYTIRWS 499
Query: 574 MDGS---------QLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITST 726
G LAS S D+ + +WD + + H+ V + + P G+YI S
Sbjct: 500 PTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASG 559
Query: 727 STDRVFRAFDVSTXKVV 777
S D+ + + K+V
Sbjct: 560 SLDKSIHIWSIKEGKIV 576
Score = 57.2 bits (132), Expect = 1e-08
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Frame = +1
Query: 241 KAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNG---- 408
K +P L LAS DS IW + ++ VH DL H K + +RWSP G
Sbjct: 455 KWDPTGSL-LASCSDDSTAKIWNIK--QSTFVH-----DLREHTKEIYTIRWSPTGPGTN 506
Query: 409 ----QL-LASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS 573
QL LAS +S + +W +L ++ + GH E V +++S
Sbjct: 507 NPNKQLTLASASFDSTVKLWDAELGKM----------------LCSFNGHREPVYSLAFS 550
Query: 574 MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTD 735
+G +ASGS+D + +W I + + + G + VCW+ +G I + D
Sbjct: 551 PNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIFE-VCWNKEGNKIAACFAD 603
Score = 51.2 bits (117), Expect = 7e-07
Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 10/169 (5%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHL--EVAADLTRHQKA--------VNVVRWSPNGQLL 417
LASG D+ IW + +VH + A + +H K V + W+ G LL
Sbjct: 280 LASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEKSKDVTTLDWNGEGTLL 339
Query: 418 ASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLAS 597
A+G + IW E +S TL H + + W+ G L +
Sbjct: 340 ATGSCDGQARIWTLNGELIS-----------------TLSKHKGPIFSLKWNKKGDYLLT 382
Query: 598 GSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVF 744
GSVD +VWD+ + H G V W + TS++ ++
Sbjct: 383 GSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIY 431
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 63.7 bits (148), Expect = 1e-10
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 5/195 (2%)
Frame = +1
Query: 184 IPEISWHNRDPVLSVDFQPKAEPNDPLR--LASGGTDSHVLIWYLSTTETGSVHLEVAAD 357
I ++ H D V SV + P + D + LAS D+ V IW S+ V +
Sbjct: 13 IQKLEGHT-DRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEE 71
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
H + V WSP+GQLLA+ + IWK Y + TL
Sbjct: 72 T--HTRTVRSCAWSPSGQLLATASFDGTTGIWKN--------------YGSEFECISTLE 115
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDI---HRARYTTILSDHKGFVQGVCWDPKG 708
GH +V +SW+ GS LA+ S D + +W++ + +L+ H V+ V W P
Sbjct: 116 GHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTM 175
Query: 709 QYITSTSTDRVFRAF 753
+ S S D + +
Sbjct: 176 DVLFSCSYDNTIKVW 190
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/120 (29%), Positives = 58/120 (48%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
LA+ D V IW + G+ + + AA LT H + V +V+W P +L S ++ I
Sbjct: 133 LATCSRDKSVWIWEVLE---GNEY-DCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIK 188
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
+W S +GE Q +T + ++ GH V IS++ G ++ + S D L +W
Sbjct: 189 VW------WSEDDDGEYQCVQT--LGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTET--GSVHLEVAADLTRHQKAVNVVRWSPN--GQLLASGDDE 435
+ASG D+ + ++ S ++ G + + H+ VN V+WSP +LLAS D+
Sbjct: 281 IASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDD 340
Query: 436 SIIFIWK 456
++ IW+
Sbjct: 341 GMVKIWQ 347
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 61.7 bits (143), Expect = 5e-10
Identities = 48/164 (29%), Positives = 76/164 (46%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
+A G D + IW TE G+ + + H+ AV +R++ G +LASG ++ I
Sbjct: 79 VAVGYADGSIRIW---DTEKGTCEV----NFNSHKGAVTALRYNKVGSMLASGSKDNDII 131
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
+W GE +++ LRGH + V D+ + G +L S S D L VW
Sbjct: 132 LWD---------VVGESG------LFR-LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVW 175
Query: 628 DIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
D+ I+S H V V DP+ +Y+ + S D+ R + V
Sbjct: 176 DLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAV 219
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +1
Query: 541 HMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYIT 720
H V + ++ GS LASGS DN +I+WD+ L H+ V + + G+ +
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 721 STSTDRVFRAFDVST 765
S+S D+ R +D+ T
Sbjct: 165 SSSKDKFLRVWDLET 179
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = +1
Query: 502 YKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFV 681
Y ++ Y +L GH V+ I S DG + +GS D L +W + + H V
Sbjct: 568 YMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSV 627
Query: 682 QGVCWDPKGQYITSTSTDRVFRAFD 756
GV + Y+ S DR+ + +D
Sbjct: 628 MGVKFVRNTHYLFSIGKDRLVKYWD 652
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +1
Query: 571 SMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRA 750
S S +A G D + +WD + + HKG V + ++ G + S S D
Sbjct: 73 SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIIL 132
Query: 751 FDV 759
+DV
Sbjct: 133 WDV 135
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 60.5 bits (140), Expect = 1e-09
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Frame = +1
Query: 346 VAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWK-QKLEELSPATE--GEEQYKETW 516
V A+ T H++++ + + S D++ + +W K + S T G+ + +
Sbjct: 199 VKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRF 258
Query: 517 VVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCW 696
V GH DV + W S L SG D + +WD R L HK V V W
Sbjct: 259 GVMPCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKW 318
Query: 697 DPKGQYITSTSTDRVFRAFDVSTXK 771
+ G ++ + S D++ + +D+ T K
Sbjct: 319 NQNGNWLLTASKDQIIKLYDIRTMK 343
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H V V W P LL SG + ++ +W + G E +L GH
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTR--------SGRELC--------SLHGHK 310
Query: 547 EDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP-KGQYITS 723
VL + W+ +G+ L + S D + ++DI + H V + W P +Y S
Sbjct: 311 NIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVS 370
Query: 724 TSTD 735
S+D
Sbjct: 371 GSSD 374
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/68 (20%), Positives = 30/68 (44%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWD 699
V+ +L + + + W+ G +L +GS + +W+ + IL H ++ + W
Sbjct: 115 VHASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWS 174
Query: 700 PKGQYITS 723
Y+ S
Sbjct: 175 HNENYMVS 182
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/137 (18%), Positives = 53/137 (38%)
Frame = +1
Query: 346 VAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVY 525
V A L +++ ++N V W+P+G+ L +G +W +++
Sbjct: 115 VHASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWN----------------GQSFNFE 158
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK 705
L+ H + + + WS + + + SG L W + + HK ++ + +
Sbjct: 159 MILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKT 218
Query: 706 GQYITSTSTDRVFRAFD 756
S S D + +D
Sbjct: 219 DLKFCSCSDDTTVKVWD 235
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 58.0 bits (134), Expect = 7e-09
Identities = 39/138 (28%), Positives = 63/138 (45%)
Frame = +1
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
LT H +AV+ V++S +G+LLAS + I + P E +++
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTIN-DPIAEPVQEFT---------- 68
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYI 717
GH + D+++S D + S S D L +WD+ L H + V ++P+ I
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 718 TSTSTDRVFRAFDVSTXK 771
S S D R +DV+T K
Sbjct: 129 VSGSFDETVRIWDVTTGK 146
Score = 54.8 bits (126), Expect = 6e-08
Identities = 47/192 (24%), Positives = 80/192 (41%)
Frame = +1
Query: 202 HNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAV 381
HNR V SV F +D LAS D + + ++T E + T H+ +
Sbjct: 23 HNR-AVSSVKFS-----SDGRLLASASADKTIRTYTINTINDPIA--EPVQEFTGHENGI 74
Query: 382 NVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLD 561
+ V +S + + + S D+ + +W ET + KTL GH
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDV----------------ETGSLIKTLIGHTNYAFC 118
Query: 562 ISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV 741
++++ + + SGS D + +WD+ + +L H V V ++ G I S+S D +
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGL 178
Query: 742 FRAFDVSTXKVV 777
R +D T V
Sbjct: 179 CRIWDSGTGHCV 190
Score = 45.2 bits (102), Expect = 5e-05
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 3/182 (1%)
Frame = +1
Query: 211 DPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVV 390
DPV +VDF D + S D IW ++G+ H V + V+ V
Sbjct: 156 DPVTAVDFN-----RDGSLIVSSSYDGLCRIW-----DSGTGHC-VKTLIDDENPPVSFV 204
Query: 391 RWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISW 570
R+SPNG+ + G ++ + +W +S A KT GH+ IS
Sbjct: 205 RFSPNGKFILVGTLDNTLRLWN-----ISSAK-----------FLKTYTGHVNAQYCISS 248
Query: 571 SM---DGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV 741
+ +G ++ SGS DN + +W+++ + L H V V P I S S D+
Sbjct: 249 AFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKT 308
Query: 742 FR 747
R
Sbjct: 309 VR 310
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +1
Query: 265 RLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESII 444
R+ SG D+ V +W L++ + + L H + V V P L+ASG + +
Sbjct: 257 RIVSGSEDNCVHMWELNSKK-------LLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309
Query: 445 FIWKQKLE 468
IW QK E
Sbjct: 310 RIWTQKKE 317
Score = 30.3 bits (65), Expect = 1.5
Identities = 26/126 (20%), Positives = 55/126 (43%)
Frame = +1
Query: 250 PNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGD 429
PN L G D+ + +W +S+ + L+ Q ++ NG+ + SG
Sbjct: 208 PNGKFILV-GTLDNTLRLWNISSAK----FLKTYTGHVNAQYCISSAFSVTNGKRIVSGS 262
Query: 430 DESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVD 609
+++ + +W+ ++L + L GH E V++++ + +ASGS+D
Sbjct: 263 EDNCVHMWELNSKKL----------------LQKLEGHTETVMNVACHPTENLIASGSLD 306
Query: 610 NKLIVW 627
+ +W
Sbjct: 307 KTVRIW 312
Score = 29.5 bits (63), Expect = 2.6
Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 3/173 (1%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
+ SG D V IW ++T + V L H V V ++ +G L+ S + +
Sbjct: 128 IVSGSFDETVRIWDVTTGKCLKV-------LPAHSDPVTAVDFNRDGSLIVSSSYDGLCR 180
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
IW +E ++V + S +G + G++DN L +W
Sbjct: 181 IWDSGTGHCVKTLIDDENPPVSFVRF---------------SPNGKFILVGTLDNTLRLW 225
Query: 628 DIHRARYTTILSDH---KGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
+I A++ + H + + G+ I S S D +++++ K++
Sbjct: 226 NISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLL 278
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Frame = +1
Query: 505 KETWVVYKTL-----RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI----HRARYTTI 657
+ET + +K+L +GH + V ++W+ +G++LASGSVD +W+I H
Sbjct: 2 EETTIPFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLE 61
Query: 658 LSDHKGFVQGVCWDPK-GQYITSTSTDRVFRAFDVSTXK 771
L H V +CWDPK + + S D+ R +D + K
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGK 100
Score = 44.0 bits (99), Expect = 1e-04
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H+K V+ V W+ NG LASG + IW + P G + K+ L+GH
Sbjct: 19 HKKKVHSVAWNSNGTKLASGSVDQTARIW-----NIEP--HGHSKAKDL-----ELKGHT 66
Query: 547 EDVLDISWSMDGSQL-ASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITS 723
+ V + W S L A+ S D + +WD + T + + G + + P G ++
Sbjct: 67 DSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQV-ELSGENINITYKPDGTHVAV 125
Query: 724 TSTDRVFRAFDVSTXK 771
+ D DV K
Sbjct: 126 GNRDDELTILDVRKFK 141
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Frame = +1
Query: 376 AVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDV 555
AV+ + S N QL A D++ + ++ ++ + + +E ++ ++ H +
Sbjct: 74 AVSFCKTSRNSQLFAVSDEDGHVSLFNSSSKKFASSATHQENTEKAR--FRDWIAHYNAI 131
Query: 556 LDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP-KGQYITSTST 732
DISW S L + S D + VWD+ + T +L H G V+ +C P + S S
Sbjct: 132 FDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSR 191
Query: 733 DRVFRAFDV 759
D F +D+
Sbjct: 192 DGCFALWDL 200
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 571 SMDGSQLASGSVDNKLIVWDIHRARY-TTILSDHKGFVQGVCWDPKGQYITSTSTD 735
S DG + SGS D +W +++ + IL H V V W P +T++D
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASD 402
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ 711
L GH +V + WS D +LASG DN+L VW+ H + S+H V+ + W P
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 712 YITST---STDRVFRAFDVST 765
+ ++ + DR R ++ +T
Sbjct: 391 GLLASGGGTADRCIRFWNTTT 411
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYI 717
G + V + W++ G+ LA G+ K+ +WD R + T + H+ V + W +
Sbjct: 250 GAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWG--SSVL 307
Query: 718 TSTSTDRVFRAFDV 759
+S S D+ D+
Sbjct: 308 SSGSRDKSILQRDI 321
Score = 39.5 bits (88), Expect = 0.002
Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 3/171 (1%)
Frame = +1
Query: 256 DPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQ-LLASGDD 432
D LASGG D+ + +W +T+ + H AV + WSP+ LLASG
Sbjct: 346 DNRELASGGNDNRLFVWNQHSTQP-------VLKYSEHTAAVKAIAWSPHVHGLLASGG- 397
Query: 433 ESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLAS--GSV 606
A + T + + V +++WS + ++L S G
Sbjct: 398 --------------GTADRCIRFWNTTTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYS 443
Query: 607 DNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
N++IVW L+ H V + P GQ I + + D R ++V
Sbjct: 444 QNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 31.1 bits (67), Expect = 0.86
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQ 459
L H+ V ++WS + + LASG +++ +F+W Q
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQ 364
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK-- 705
L+GH ++ + WS D +LASG DNKL VW+ H + +H V+ + W P
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 706 GQYITSTST-DRVFRAFDVST 765
G + T DR R ++ +T
Sbjct: 348 GLLASGGGTADRCIRFWNTTT 368
Score = 38.3 bits (85), Expect = 0.006
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 5/174 (2%)
Frame = +1
Query: 253 NDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNG-QLLASGD 429
+D LASGG D+ + +W +T+ H AV + WSP+ LLASG
Sbjct: 302 SDNRELASGGNDNKLFVWNQHSTQP-------VLRFCEHAAAVKAIAWSPHHFGLLASGG 354
Query: 430 D--ESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLAS-- 597
+ I W + Q V ++ WS + ++L S
Sbjct: 355 GTADRCIRFWNTTTNTHLNCVDTNSQ-----------------VCNLVWSKNVNELVSTH 397
Query: 598 GSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
G N++IVW L+ H V + P GQ I + + D R ++V
Sbjct: 398 GYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +1
Query: 547 EDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITST 726
E V + W++ G+ LA G+ + +WD+ R + + H+ V + W ++S
Sbjct: 210 ETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAW--SSSVLSSG 267
Query: 727 STDRVFRAFDVST 765
S D+ D+ T
Sbjct: 268 SRDKSILQRDIRT 280
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
L+SG D +L + T E H+ + L H+ + ++WS + + LASG +++ +F
Sbjct: 264 LSSGSRDKSILQRDIRTQED---HV---SKLKGHKSEICGLKWSSDNRELASGGNDNKLF 317
Query: 448 IWKQ 459
+W Q
Sbjct: 318 VWNQ 321
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 56.0 bits (129), Expect = 3e-08
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Frame = +1
Query: 205 NRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVN 384
++ PV +DF P E LAS T VL W L VA D + VN
Sbjct: 145 HKGPVTGLDFHPNGE-----LLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVN 199
Query: 385 VVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRG-HMEDVLD 561
+ RWSP+G+ LA + + ++ + GE+ + LRG H+E +
Sbjct: 200 IPRWSPDGRTLAVPGLRNDVVMYDR--------FTGEKLF--------ALRGDHLEAICY 243
Query: 562 ISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVC---WDPKGQYIT 720
++W+ +G +A+ +D ++++WD+ + + + HK F + +C W P G ++
Sbjct: 244 LTWAPNGKYIATSGLDKQVLLWDVDKKQ---DIDRHK-FEERICCMSWKPNGNALS 295
Score = 45.2 bits (102), Expect = 5e-05
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Frame = +1
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
L H+ V + + PNG+LLAS D + W+ + +S +G V T
Sbjct: 142 LKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKG--------VAPDT-- 191
Query: 538 GHMEDVLDI-SWSMDGSQLASGSVDNKLIVWD-IHRARYTTILSDHKGFVQGVCWDPKGQ 711
G +++I WS DG LA + N ++++D + + DH + + W P G+
Sbjct: 192 GFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGK 251
Query: 712 YITSTSTDRVFRAFDV 759
YI ++ D+ +DV
Sbjct: 252 YIATSGLDKQVLLWDV 267
Score = 33.5 bits (73), Expect = 0.16
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 1/150 (0%)
Frame = +1
Query: 187 PEISWHNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTR 366
P I H++D V S+ A ND LASG D V ++ + E ++TR
Sbjct: 55 PTILRHHQDGVTSL-----ALSNDSTLLASGSIDHCVKLYKFPSGE-------FQTNITR 102
Query: 367 HQKAVNVVRWSPNGQLLA-SGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGH 543
+ V+ ++ +G LLA +GDDE I +L +G + + L+GH
Sbjct: 103 FTLPIRVLAFNGSGSLLAAAGDDEGI---------KLINTFDGS--------IVRVLKGH 145
Query: 544 MEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
V + + +G LAS ++ W++
Sbjct: 146 KGPVTGLDFHPNGELLASIDTTGTVLCWEL 175
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ 711
LR H + V ++ S D + LASGS+D+ + ++ + T ++ ++ + ++ G
Sbjct: 58 LRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGS 117
Query: 712 YITSTSTD---RVFRAFDVSTXKVV 777
+ + D ++ FD S +V+
Sbjct: 118 LLAAAGDDEGIKLINTFDGSIVRVL 142
Score = 29.9 bits (64), Expect = 2.0
Identities = 32/125 (25%), Positives = 53/125 (42%)
Frame = +1
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
L HQ V + S + LLASG + + ++K GE Q T + TL
Sbjct: 58 LRHHQDGVTSLALSNDSTLLASGSIDHCVKLYK--------FPSGEFQ---TNITRFTL- 105
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYI 717
+ ++++ GS LA+ D + + + +L HKG V G+ + P G+ +
Sbjct: 106 ----PIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELL 161
Query: 718 TSTST 732
S T
Sbjct: 162 ASIDT 166
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 55.2 bits (127), Expect = 5e-08
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Frame = +1
Query: 256 DPL-RLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQL----LA 420
DP+ +LASGG D+ V +W L+ GS ++ L +H V V W+PN L +A
Sbjct: 174 DPVYKLASGGCDNTVKVWKLAN---GSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIA 230
Query: 421 SGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASG 600
SG + + IW T G+E E W K L+ M V +SWS+ G+ LA
Sbjct: 231 SGSQDGKVIIW----------TVGKEG--EQWEG-KVLKDFMTPVWRVSWSLTGNLLAVS 277
Query: 601 SVDNKLIVW 627
+N + VW
Sbjct: 278 DGNNNVTVW 286
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMD--GSQLASGSVDNKLIVW-DIHRARYTT--ILSDHKGFVQGVC 693
TL GH V +++W+ GS LAS S D ++I+W + ++ ++T + +DHK V +
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIA 110
Query: 694 WDP 702
W P
Sbjct: 111 WAP 113
Score = 34.3 bits (75), Expect = 0.092
Identities = 41/173 (23%), Positives = 66/173 (38%), Gaps = 7/173 (4%)
Frame = +1
Query: 205 NRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVN 384
+R PV V + A P LAS D V++W E T H+ +VN
Sbjct: 55 HRGPVWEVAW---AHPKYGSILASCSYDGQVILW----KEGNQNQWTQDHVFTDHKSSVN 107
Query: 385 VVRWSPN--GQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVL 558
+ W+P+ G LA G + I ++ + + + ++ + L
Sbjct: 108 SIAWAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGAL 167
Query: 559 DISWSMDGS-QLASGSVDNKLIVWDIHRARYT----TILSDHKGFVQGVCWDP 702
S +D +LASG DN + VW + + L H +V+ V W P
Sbjct: 168 VSSGLLDPVYKLASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAP 220
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +1
Query: 523 YKTLRGHMEDVLDISWS----MDGSQLASGSVDNKLIVWDI 633
+ L+ H + V D++W+ + S +ASGS D K+I+W +
Sbjct: 203 FPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVIIWTV 243
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
+ASG D V+IW + E +V D V V WS G LLA D + +
Sbjct: 229 IASGSQDGKVIIWTVGK-EGEQWEGKVLKDF---MTPVWRVSWSLTGNLLAVSDGNNNVT 284
Query: 448 IWKQKLE 468
+WK+ ++
Sbjct: 285 VWKEAVD 291
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 54.8 bits (126), Expect = 6e-08
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Frame = +1
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
L H A++ V++S +G LLAS + + +W AT + +
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWS--------AT--------NYSLIHRYE 82
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARY--TTILSDHKGFVQGVCWDPKGQ 711
GH + D++WS D S S D L +WD R+ Y +L H FV V ++P
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASDDCTLRIWDA-RSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 712 YITSTSTDRVFRAFDVSTXKVV 777
I S S D R ++V T K V
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCV 163
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/168 (22%), Positives = 68/168 (40%)
Frame = +1
Query: 253 NDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDD 432
ND LAS D +++W S T +H H ++ + WS + S D
Sbjct: 53 NDGNLLASASVDKTMILW--SATNYSLIHRYEG-----HSSGISDLAWSSDSHYTCSASD 105
Query: 433 ESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDN 612
+ + IW + SP + K LRGH V ++++ + + SGS D
Sbjct: 106 DCTLRIWDAR----SP-----------YECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDE 150
Query: 613 KLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFD 756
+ +W++ + ++ H + V ++ G I S S D + +D
Sbjct: 151 TIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWD 198
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK 705
KTL GH + + +S DG+ LAS SVD +I+W H + + W
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 706 GQYITSTSTDRVFRAFD 756
Y S S D R +D
Sbjct: 97 SHYTCSASDDCTLRIWD 113
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 1/139 (0%)
Frame = +1
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
L H V V ++P L+ SG + I IW+ K T + ++
Sbjct: 124 LRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVK----------------TGKCVRMIK 167
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRAR-YTTILSDHKGFVQGVCWDPKGQY 714
H + + ++ DGS + S S D +WD T++ D V + P G++
Sbjct: 168 AHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKF 227
Query: 715 ITSTSTDRVFRAFDVSTXK 771
I + D + + +T K
Sbjct: 228 ILVATLDSTLKLSNYATGK 246
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSM---DGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCW 696
K GH V I+ + +G + SGS DN + +WD+ L H V V
Sbjct: 249 KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSC 308
Query: 697 DPKGQYITST 726
P I+S+
Sbjct: 309 HPVQNEISSS 318
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 54.8 bits (126), Expect = 6e-08
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Frame = +1
Query: 217 VLSVDFQPKAEPN--------DPL-RLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRH 369
V SV + P EP DP+ +LASGG DS V +W S GS ++ L +H
Sbjct: 153 VTSVSWAPATEPGALVSSGMIDPVYKLASGGCDSTVKVWKFSN---GSWKMDCFPALNKH 209
Query: 370 QKAVNVVRWSPNGQL----LASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
V V W+PN L +ASG ++ + IW + EGE Q++ T L+
Sbjct: 210 TDWVRDVAWAPNLGLPKSTIASGSEDGKVIIW-------TIGKEGE-QWEGT-----VLK 256
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
V +SWS+ G+ LA +N + VW
Sbjct: 257 DFKTPVWRVSWSLTGNLLAVSDGNNNVTVW 286
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMD--GSQLASGSVDNKLIVW-DIHRARYTT--ILSDHKGFVQGVC 693
TL GH V ++W+ GS LAS S D ++I+W + ++ ++T + +DHK V +
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIA 110
Query: 694 WDP 702
W P
Sbjct: 111 WAP 113
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +1
Query: 523 YKTLRGHMEDVLDISWS----MDGSQLASGSVDNKLIVWDIHRARYT---TILSDHKGFV 681
+ L H + V D++W+ + S +ASGS D K+I+W I + T+L D K V
Sbjct: 203 FPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTIGKEGEQWEGTVLKDFKTPV 262
Query: 682 QGVCWDPKGQYI 717
V W G +
Sbjct: 263 WRVSWSLTGNLL 274
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
+ASG D V+IW + E V D + V V WS G LLA D + +
Sbjct: 229 IASGSEDGKVIIWTIGK-EGEQWEGTVLKDF---KTPVWRVSWSLTGNLLAVSDGNNNVT 284
Query: 448 IWKQKLE 468
+WK+ ++
Sbjct: 285 VWKESVD 291
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 54.4 bits (125), Expect = 8e-08
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Frame = +1
Query: 358 LTRHQKAV-NVVRWSPNGQLLASGDDESIIFIWKQK--LEELSPATEGEEQYKETWVVYK 528
L H++ V +VV S + + LA+ + IWK L + A+ G + W +
Sbjct: 102 LKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKTDGTLLQTFKASSGFDSLARVWDLRT 161
Query: 529 T-----LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVC 693
+GH++ VL + +S +G LASG DN+ +WD+ + I+ H V V
Sbjct: 162 ARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVK 221
Query: 694 WDPKGQYITSTST 732
++P+ +Y +T++
Sbjct: 222 YEPQERYFLATAS 234
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 568 WSMDGSQL----ASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTD 735
W DG+ L AS D+ VWD+ AR I H V V + P G ++ S D
Sbjct: 134 WKTDGTLLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGED 193
Query: 736 RVFRAFDVSTXKVV 777
R +D+ K++
Sbjct: 194 NQCRIWDLRMRKLL 207
Score = 29.9 bits (64), Expect = 2.0
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +1
Query: 217 VLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRW 396
VLSVDF P LASGG D+ IW L + + + H V+ V++
Sbjct: 175 VLSVDFSPNG-----YHLASGGEDNQCRIWDLRMRKLLYI-------IPAHVNLVSQVKY 222
Query: 397 SPNGQ-LLASGDDESIIFIWKQKLEELSPATEGEE 498
P + LA+ + + IW + L + G E
Sbjct: 223 EPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHE 257
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/129 (28%), Positives = 60/129 (46%)
Frame = +1
Query: 391 RWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISW 570
R+SP+GQ LAS + I +W + +S + + QY+ ++ H + VL I +
Sbjct: 220 RFSPDGQFLASSSVDGFIEVW----DYISGKLKKDLQYQAD----ESFMMHDDPVLCIDF 271
Query: 571 SMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRA 750
S D LASGS D K+ +W I H V + + G + STS D+ R
Sbjct: 272 SRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI 331
Query: 751 FDVSTXKVV 777
+ + K++
Sbjct: 332 HGLKSGKLL 340
Score = 50.0 bits (114), Expect = 2e-06
Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 1/167 (0%)
Frame = +1
Query: 268 LASGGTDSHVLIW-YLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESII 444
LAS D + +W Y+S + + H V + +S + ++LASG + I
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKI 287
Query: 445 FIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIV 624
IW+ + T V + H + V +S+S DGSQL S S D +
Sbjct: 288 KIWRIR----------------TGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI 331
Query: 625 WDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVST 765
+ + H +V + G I + S+D + +D T
Sbjct: 332 HGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKT 378
Score = 33.5 bits (73), Expect = 0.16
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Frame = +1
Query: 166 KKMKFAIPEISWHNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLE 345
K +++ E + DPVL +DF +E LASG D + IW + TG
Sbjct: 249 KDLQYQADESFMMHDDPVLCIDFSRDSE-----MLASGSQDGKIKIWRI---RTGVCIRR 300
Query: 346 VAADLTRHQKAVNVVRWSPNG-QLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVV 522
A H + V + +S +G QLL++ D++ ++ L ++ +
Sbjct: 301 FDA----HSQGVTSLSFSRDGSQLLSTSFDQT------ARIHGL-----------KSGKL 339
Query: 523 YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWD 630
K RGH V ++ DGS++ + S D + VWD
Sbjct: 340 LKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/126 (26%), Positives = 55/126 (43%)
Frame = +1
Query: 388 VRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDIS 567
V W PN +A+G + + +W + E + GH VL ++
Sbjct: 505 VDWHPNCNYIATGSSDKTVRLWDVQTGEC----------------VRIFIGHRSMVLSLA 548
Query: 568 WSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFR 747
S DG +ASG D +++WD+ AR T L H V + + +G + S S D +
Sbjct: 549 MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVK 608
Query: 748 AFDVST 765
+DV++
Sbjct: 609 LWDVTS 614
Score = 50.0 bits (114), Expect = 2e-06
Identities = 39/136 (28%), Positives = 63/136 (46%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
+A+G +D V +W + T E + + H+ V + SP+G+ +ASGD++ I
Sbjct: 514 IATGSSDKTVRLWDVQTGECVRIFIG-------HRSMVLSLAMSPDGRYMASGDEDGTIM 566
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
+W +LS A L GH V +S+S +GS LASGS D + +W
Sbjct: 567 MW-----DLSTAR-----------CITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 610
Query: 628 DIHRARYTTILSDHKG 675
D+ + T + G
Sbjct: 611 DVTSSTKLTKAEEKNG 626
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK 705
+ + GH+ DV W + + +A+GS D + +WD+ I H+ V + P
Sbjct: 496 RIMAGHLSDV---DWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPD 552
Query: 706 GQYITSTSTDRVFRAFDVSTXKVV 777
G+Y+ S D +D+ST + +
Sbjct: 553 GRYMASGDEDGTIMMWDLSTARCI 576
Score = 48.0 bits (109), Expect = 7e-06
Identities = 40/140 (28%), Positives = 57/140 (40%)
Frame = +1
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
L H V +SP G + S ++ I +W KL V YK
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNA-------------NLVCYK--- 457
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYI 717
GH V D +S G AS S D +W + R + I++ H + V W P YI
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGH---LSDVDWHPNCNYI 514
Query: 718 TSTSTDRVFRAFDVSTXKVV 777
+ S+D+ R +DV T + V
Sbjct: 515 ATGSSDKTVRLWDVQTGECV 534
Score = 41.1 bits (92), Expect = 8e-04
Identities = 43/190 (22%), Positives = 72/190 (37%), Gaps = 10/190 (5%)
Frame = +1
Query: 220 LSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLT--RHQKAVNVVR 393
++V P+ +P L + S + +L + + SV + + T +N
Sbjct: 300 ITVSPAPRVKPELALPVMSTDVEQSILEDLRNRVQLSSVAMPSVSFYTFVNTHNGLNCSS 359
Query: 394 WSPNGQLLASGDDESIIFIWKQ-KLEEL-SPATEGEEQYKETWV------VYKTLRGHME 549
S +G L+A G +S I +W K+ + S A + E + + Y L GH
Sbjct: 360 ISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHSG 419
Query: 550 DVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTS 729
V ++S G + S S D + +W H V + P G Y S S
Sbjct: 420 PVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCS 479
Query: 730 TDRVFRAFDV 759
DR R + +
Sbjct: 480 HDRTARIWSM 489
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/83 (30%), Positives = 36/83 (43%)
Frame = +1
Query: 205 NRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVN 384
+R VLS+ P D +ASG D +++W LST L H V
Sbjct: 540 HRSMVLSLAMSP-----DGRYMASGDEDGTIMMWDLSTARC-------ITPLMGHNSCVW 587
Query: 385 VVRWSPNGQLLASGDDESIIFIW 453
+ +S G LLASG + + +W
Sbjct: 588 SLSYSGEGSLLASGSADCTVKLW 610
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/139 (23%), Positives = 66/139 (47%)
Frame = +1
Query: 361 TRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRG 540
T H+ + V + P G+ LASG ++ + +W + K+ + +T +G
Sbjct: 46 TGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTR--------------KKGCI--QTYKG 89
Query: 541 HMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYIT 720
H + I +S DG + SG +DN + VWD+ + H+G ++ + + P +
Sbjct: 90 HTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLA 149
Query: 721 STSTDRVFRAFDVSTXKVV 777
+ S DR + +D+ T +++
Sbjct: 150 TGSADRTVKFWDLETFELI 168
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/84 (25%), Positives = 38/84 (45%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK 705
+ GH + + + G LASGS D L VWD + H + + + P
Sbjct: 43 RAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPD 102
Query: 706 GQYITSTSTDRVFRAFDVSTXKVV 777
G+++ S D V + +D++ K++
Sbjct: 103 GRWVVSGGLDNVVKVWDLTAGKLL 126
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/76 (21%), Positives = 38/76 (50%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG 708
+L GH V ++++ + + +G+ + +WD+ ++ + H+ V + P G
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 709 QYITSTSTDRVFRAFD 756
+++ S S+D R +D
Sbjct: 62 EFLASGSSDTNLRVWD 77
Score = 34.7 bits (76), Expect = 0.070
Identities = 20/83 (24%), Positives = 43/83 (51%)
Frame = +1
Query: 205 NRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVN 384
+R +V+F P E LASG +D+++ +W T + G + H + ++
Sbjct: 48 HRSNCSAVEFHPFGE-----FLASGSSDTNLRVW--DTRKKGCIQTYKG-----HTRGIS 95
Query: 385 VVRWSPNGQLLASGDDESIIFIW 453
+ +SP+G+ + SG ++++ +W
Sbjct: 96 TIEFSPDGRWVVSGGLDNVVKVW 118
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP 702
L GH +V + WS D +LASG DN+L+VW+ H + L++H V+ + W P
Sbjct: 294 LVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSP 350
Score = 42.7 bits (96), Expect = 3e-04
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 6/175 (3%)
Frame = +1
Query: 253 NDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPN-GQLLASGD 429
+D LASGG D+ +L+W + + LT H AV + WSP+ LLASG
Sbjct: 308 HDDRELASGGNDNQLLVW-------NNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGG 360
Query: 430 ---DESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLAS- 597
D I F +L+ G + V +++WS + +++ S
Sbjct: 361 GTADRCIRFWNTTNGNQLNSIDTGSQ------------------VCNLAWSKNVNEIVST 402
Query: 598 -GSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
G N++++W L+ H V + P GQ I + + D R ++V
Sbjct: 403 HGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +1
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYI 717
G + V + W+ +GS ++ G+ ++ VWD + + + H+ + W+ + +
Sbjct: 213 GPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWN--SRIL 270
Query: 718 TSTSTDRVFRAFDV 759
+S S DR D+
Sbjct: 271 SSGSRDRNILQHDI 284
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 52.8 bits (121), Expect = 2e-07
Identities = 42/170 (24%), Positives = 71/170 (41%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
L +GG D V +W + L H ++ V + + L+A+G I
Sbjct: 125 LVTGGEDHKVNLWAIGKPNA-------ILSLYGHSSGIDSVTFDASEGLVAAGAASGTIK 177
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
+W LEE V +TL GH + + +++ G ASGS+D L +W
Sbjct: 178 LWD--LEEAK--------------VVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIW 221
Query: 628 DIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
DI + H V + + P G++I S D V + +D++ K++
Sbjct: 222 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLL 271
Score = 48.8 bits (111), Expect = 4e-06
Identities = 37/170 (21%), Positives = 73/170 (42%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
+A+G + +W L + V LT H+ V + P G+ ASG ++ +
Sbjct: 167 VAAGAASGTIKLWDLEEAK-------VVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLK 219
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
IW ++ ++ T +GH V + ++ DG + SG DN + VW
Sbjct: 220 IW---------------DIRKKGCIH-TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVW 263
Query: 628 DIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
D+ + H+G +Q + + P + + S D+ + +D+ T +++
Sbjct: 264 DLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELI 313
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/83 (28%), Positives = 46/83 (55%)
Frame = +1
Query: 205 NRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVN 384
+R +SV+F P E ASG D+++ IW + + G +H H + VN
Sbjct: 193 HRSNCVSVNFHPFGE-----FFASGSLDTNLKIWDIR--KKGCIHTYKG-----HTRGVN 240
Query: 385 VVRWSPNGQLLASGDDESIIFIW 453
V+R++P+G+ + SG +++++ +W
Sbjct: 241 VLRFTPDGRWIVSGGEDNVVKVW 263
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP-KGQ 711
RGH ++LD+SWS G L S SVD + +W + + + HK FV V ++P
Sbjct: 360 RGHTGEILDLSWSEKGF-LLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDN 418
Query: 712 YITSTSTDRVFRAFDVSTXKVV 777
Y S S D R +DVS +VV
Sbjct: 419 YFISGSIDGKVRIWDVSQFRVV 440
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/36 (25%), Positives = 23/36 (63%)
Frame = +1
Query: 346 VAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW 453
V + + H ++ V+++S +G+ LAS ++ ++ +W
Sbjct: 249 VGQEFSAHDGSIVVMKFSHDGKYLASAGEDCVVRVW 284
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/105 (23%), Positives = 48/105 (45%)
Frame = +1
Query: 463 LEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA 642
L E P+ ++ W Y+ L+GH+ V +++ +GS D + +WD+
Sbjct: 143 LMERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 202
Query: 643 RYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
L+ H G V+G+ + Y+ S D+ + +D+ KV+
Sbjct: 203 VLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVI 247
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +1
Query: 541 HMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYIT 720
H DV + Q+ +GS D+ + WD+ + +++HK V+ + PK
Sbjct: 294 HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFV 353
Query: 721 STSTDRV 741
S S D +
Sbjct: 354 SASADNI 360
Score = 31.1 bits (67), Expect = 0.86
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +1
Query: 511 TWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGV 690
T V+ TL GH+ V ++ S + + S D ++ WD+ + + H V +
Sbjct: 201 TGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCL 260
Query: 691 CWDPKGQYITSTSTDRVFRAFDVST 765
P + + D V R +D+ T
Sbjct: 261 ALHPTLDVVLTGGRDSVCRVWDIRT 285
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 51.6 bits (118), Expect = 6e-07
Identities = 39/170 (22%), Positives = 70/170 (41%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
L +GG D V +W + L H ++ V + + L+A+G I
Sbjct: 32 LVTGGEDHKVNLWAIGKPNA-------ILSLYGHSSGIDSVTFDASEVLVAAGAASGTIK 84
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
+W LEE + +TL GH + + + + G ASGS+D L +W
Sbjct: 85 LWD--LEEAK--------------IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 628 DIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
DI + H V + + P G+++ S D + + +D++ K++
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Score = 50.8 bits (116), Expect = 1e-06
Identities = 38/170 (22%), Positives = 74/170 (43%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
+A+G + +W L + + LT H+ V + P G+ ASG ++ +
Sbjct: 74 VAAGAASGTIKLWDLEEAK-------IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
IW ++ ++ T +GH V + ++ DG + SG DN + VW
Sbjct: 127 IW---------------DIRKKGCIH-TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Query: 628 DIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
D+ + T H+G +Q + + P + + S DR + +D+ T +++
Sbjct: 171 DLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELI 220
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/83 (31%), Positives = 46/83 (55%)
Frame = +1
Query: 205 NRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVN 384
+R +SVDF P E ASG D+++ IW + + G +H H + VN
Sbjct: 100 HRSNCISVDFHPFGE-----FFASGSLDTNLKIWDIR--KKGCIHTYKG-----HTRGVN 147
Query: 385 VVRWSPNGQLLASGDDESIIFIW 453
V+R++P+G+ + SG +++I+ +W
Sbjct: 148 VLRFTPDGRWVVSGGEDNIVKVW 170
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 51.6 bits (118), Expect = 6e-07
Identities = 39/170 (22%), Positives = 70/170 (41%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
L +GG D V +W + L H ++ V + + L+A+G I
Sbjct: 32 LVTGGEDHKVNLWAIGKPNA-------ILSLYGHSSGIDSVTFDASEVLVAAGAASGTIK 84
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
+W LEE + +TL GH + + + + G ASGS+D L +W
Sbjct: 85 LWD--LEEAK--------------IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 628 DIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
DI + H V + + P G+++ S D + + +D++ K++
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Score = 50.8 bits (116), Expect = 1e-06
Identities = 38/170 (22%), Positives = 74/170 (43%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
+A+G + +W L + + LT H+ V + P G+ ASG ++ +
Sbjct: 74 VAAGAASGTIKLWDLEEAK-------IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
IW ++ ++ T +GH V + ++ DG + SG DN + VW
Sbjct: 127 IW---------------DIRKKGCIH-TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Query: 628 DIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
D+ + T H+G +Q + + P + + S DR + +D+ T +++
Sbjct: 171 DLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELI 220
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/83 (31%), Positives = 46/83 (55%)
Frame = +1
Query: 205 NRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVN 384
+R +SVDF P E ASG D+++ IW + + G +H H + VN
Sbjct: 100 HRSNCISVDFHPFGE-----FFASGSLDTNLKIWDIR--KKGCIHTYKG-----HTRGVN 147
Query: 385 VVRWSPNGQLLASGDDESIIFIW 453
V+R++P+G+ + SG +++I+ +W
Sbjct: 148 VLRFTPDGRWVVSGGEDNIVKVW 170
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 51.6 bits (118), Expect = 6e-07
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPN--GQLLASGDDESI 441
+A GG DS I+ LS+T + V+ LT H+ V+ ++ PN L+ S D++
Sbjct: 122 VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTC 181
Query: 442 IFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS-MDGSQLASGSVDNKL 618
I +W + GE Q GH DVL +S S + + SGS D+
Sbjct: 182 I-LWDVTTGLKTSVFGGEFQ-----------SGHTADVLSVSISGSNPNWFISGSCDSTA 229
Query: 619 IVWDIHRA-RYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVST 765
+WD A R H+G V V + P G + S D R +D+ T
Sbjct: 230 RLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRT 279
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +1
Query: 517 VVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCW 696
V +TL+GH V + W+ + +++ S S D +LIVW+ ++ T + +V +
Sbjct: 56 VCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAF 115
Query: 697 DPKGQYITSTSTDRVFRAFDVST 765
P GQ + D V F +S+
Sbjct: 116 SPNGQSVACGGLDSVCSIFSLSS 138
Score = 30.7 bits (66), Expect = 1.1
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Frame = +1
Query: 217 VLSVDFQPKAEPNDPLRLASGGTDSHVLIWY-LSTTETGSVHLEVAADLTRHQKAVNVVR 393
V S+D+ P+ R+ S D +++W L++ +T ++ L A +T
Sbjct: 68 VYSLDWTPERN-----RIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMT--------CA 114
Query: 394 WSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISW- 570
+SPNGQ +A G +S+ I+ LS + + T V + L GH V +
Sbjct: 115 FSPNGQSVACGGLDSVCSIF-----SLSSTADKD----GTVPVSRMLTGHRGYVSCCQYV 165
Query: 571 SMDGSQLASGSVDNKLIVWDIHRARYTTI 657
+ + L + S D I+WD+ T++
Sbjct: 166 PNEDAHLITSSGDQTCILWDVTTGLKTSV 194
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDH 669
+T GH DV + + DG + +GS D ++DI + H
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 51.6 bits (118), Expect = 6e-07
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPN--GQLLASGDDESI 441
+A GG DS I+ LS+T + V+ LT H+ V+ ++ PN L+ S D++
Sbjct: 60 VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTC 119
Query: 442 IFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS-MDGSQLASGSVDNKL 618
I +W + GE Q GH DVL +S S + + SGS D+
Sbjct: 120 I-LWDVTTGLKTSVFGGEFQ-----------SGHTADVLSVSISGSNPNWFISGSCDSTA 167
Query: 619 IVWDIHRA-RYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVST 765
+WD A R H+G V V + P G + S D R +D+ T
Sbjct: 168 RLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRT 217
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTST 732
V + W+ + +++ S S D +LIVW+ ++ T + +V + P GQ +
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGL 65
Query: 733 DRVFRAFDVST 765
D V F +S+
Sbjct: 66 DSVCSIFSLSS 76
Score = 30.7 bits (66), Expect = 1.1
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Frame = +1
Query: 217 VLSVDFQPKAEPNDPLRLASGGTDSHVLIWY-LSTTETGSVHLEVAADLTRHQKAVNVVR 393
V S+D+ P+ R+ S D +++W L++ +T ++ L A +T
Sbjct: 6 VYSLDWTPERN-----RIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMT--------CA 52
Query: 394 WSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISW- 570
+SPNGQ +A G +S+ I+ LS + + T V + L GH V +
Sbjct: 53 FSPNGQSVACGGLDSVCSIF-----SLSSTADKD----GTVPVSRMLTGHRGYVSCCQYV 103
Query: 571 SMDGSQLASGSVDNKLIVWDIHRARYTTI 657
+ + L + S D I+WD+ T++
Sbjct: 104 PNEDAHLITSSGDQTCILWDVTTGLKTSV 132
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDH 669
+T GH DV + + DG + +GS D ++DI + H
Sbjct: 180 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 227
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 51.6 bits (118), Expect = 6e-07
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPN--GQLLASGDDESI 441
+A GG DS I+ LS+T + V+ LT H+ V+ ++ PN L+ S D++
Sbjct: 122 VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTC 181
Query: 442 IFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS-MDGSQLASGSVDNKL 618
I +W + GE Q GH DVL +S S + + SGS D+
Sbjct: 182 I-LWDVTTGLKTSVFGGEFQ-----------SGHTADVLSVSISGSNPNWFISGSCDSTA 229
Query: 619 IVWDIHRA-RYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVST 765
+WD A R H+G V V + P G + S D R +D+ T
Sbjct: 230 RLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRT 279
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +1
Query: 517 VVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCW 696
V +TL+GH V + W+ + +++ S S D +LIVW+ ++ T + +V +
Sbjct: 56 VCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAF 115
Query: 697 DPKGQYITSTSTDRVFRAFDVST 765
P GQ + D V F +S+
Sbjct: 116 SPNGQSVACGGLDSVCSIFSLSS 138
Score = 30.7 bits (66), Expect = 1.1
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Frame = +1
Query: 217 VLSVDFQPKAEPNDPLRLASGGTDSHVLIWY-LSTTETGSVHLEVAADLTRHQKAVNVVR 393
V S+D+ P+ R+ S D +++W L++ +T ++ L A +T
Sbjct: 68 VYSLDWTPERN-----RIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMT--------CA 114
Query: 394 WSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISW- 570
+SPNGQ +A G +S+ I+ LS + + T V + L GH V +
Sbjct: 115 FSPNGQSVACGGLDSVCSIF-----SLSSTADKD----GTVPVSRMLTGHRGYVSCCQYV 165
Query: 571 SMDGSQLASGSVDNKLIVWDIHRARYTTI 657
+ + L + S D I+WD+ T++
Sbjct: 166 PNEDAHLITSSGDQTCILWDVTTGLKTSV 194
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDH 669
+T GH DV + + DG + +GS D ++DI + H
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 51.6 bits (118), Expect = 6e-07
Identities = 33/139 (23%), Positives = 66/139 (47%)
Frame = +1
Query: 361 TRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRG 540
T H+ + V + P G+ LASG ++ + IW + K+ + +T +G
Sbjct: 97 TGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIR--------------KKGCI--QTYKG 140
Query: 541 HMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYIT 720
H + I ++ DG + SG +DN + VWD+ + H+G ++ + + P +
Sbjct: 141 HSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLA 200
Query: 721 STSTDRVFRAFDVSTXKVV 777
+ S DR + +D+ T +++
Sbjct: 201 TGSADRTVKFWDLETFELI 219
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK 705
+ GH + + + G LASGS D L +WDI + H + + + P
Sbjct: 94 RAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPD 153
Query: 706 GQYITSTSTDRVFRAFDVSTXKVV 777
G+++ S D V + +D++ K++
Sbjct: 154 GRWVVSGGLDNVVKVWDLTAGKLL 177
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/97 (20%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Frame = +1
Query: 484 TEGEEQYKETWVVYK-----TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARY 648
T G++ W + K +L GH V +++ + +G+ + +WD+ A+
Sbjct: 33 TGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKM 92
Query: 649 TTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
+ H+ V + P G+++ S S+D + +D+
Sbjct: 93 VRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDI 129
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/83 (24%), Positives = 44/83 (53%)
Frame = +1
Query: 205 NRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVN 384
+R +V+F P E LASG +D+++ IW + + G + H + ++
Sbjct: 99 HRSNCSAVEFHPFGE-----FLASGSSDANLKIWDIR--KKGCIQTYKG-----HSRGIS 146
Query: 385 VVRWSPNGQLLASGDDESIIFIW 453
+R++P+G+ + SG ++++ +W
Sbjct: 147 TIRFTPDGRWVVSGGLDNVVKVW 169
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +1
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQY 714
+GH++ V +++S +G LASG DN+ +WD+ + I+ H V V ++P+ Y
Sbjct: 420 QGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGY 479
Query: 715 ITSTST 732
+T++
Sbjct: 480 FLATAS 485
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +1
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYI 717
GH V I++ DG+ AS +D+ VWD+ R + H V V + P G ++
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 718 TSTSTDRVFRAFDVSTXK 771
S D R +D+ K
Sbjct: 439 ASGGEDNQCRIWDLRMRK 456
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/92 (21%), Positives = 40/92 (43%)
Frame = +1
Query: 502 YKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFV 681
+K + +T GH++ + +++ G L + S D +WDI+ + H V
Sbjct: 325 WKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSV 384
Query: 682 QGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
G+ + G S D + R +D+ T + +
Sbjct: 385 YGIAFQQDGALAASCGLDSLARVWDLRTGRSI 416
Score = 34.3 bits (75), Expect = 0.092
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Frame = +1
Query: 214 PVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVR 393
PV SV+F P LASGG D+ IW L + S+++ + H V+ V+
Sbjct: 425 PVFSVNFSPNG-----YHLASGGEDNQCRIWDLRMRK--SLYI-----IPAHANLVSQVK 472
Query: 394 WSP-NGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISW 570
+ P G LA+ + + IW + + + K+L GH V +
Sbjct: 473 YEPQEGYFLATASYDMKVNIWSGR----------------DFSLVKSLAGHESKVASLDI 516
Query: 571 SMDGSQLASGSVDNKLIVW 627
+ D S +A+ S D + +W
Sbjct: 517 TADSSCIATVSHDRTIKLW 535
Score = 33.9 bits (74), Expect = 0.12
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 1/165 (0%)
Frame = +1
Query: 271 ASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFI 450
AS G DS +W L T + V H K V V +SPNG LASG +++ I
Sbjct: 397 ASCGLDSLARVWDLRTGRSILV-------FQGHIKPVFSVNFSPNGYHLASGGEDNQCRI 449
Query: 451 WKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS-MDGSQLASGSVDNKLIVW 627
W ++ K +++ H V + + +G LA+ S D K+ +W
Sbjct: 450 WDLRMR------------KSLYII----PAHANLVSQVKYEPQEGYFLATASYDMKVNIW 493
Query: 628 DIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVS 762
L+ H+ V + I + S DR + + S
Sbjct: 494 SGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSS 538
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/105 (21%), Positives = 47/105 (44%)
Frame = +1
Query: 463 LEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA 642
L E P+ ++ W Y+ ++GH+ V +++ +GS D + +WD+
Sbjct: 149 LMERIPSRWPRPEWHAPWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 208
Query: 643 RYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
L+ H V+G+ + Y+ S D+ + +D+ KV+
Sbjct: 209 VLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVI 253
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ 711
L GH V + Q+ +GS D + WD+ + + L+ HK V+ + PK
Sbjct: 298 LSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKEN 357
Query: 712 YITSTSTD 735
S S D
Sbjct: 358 AFASASAD 365
Score = 34.3 bits (75), Expect = 0.092
Identities = 21/85 (24%), Positives = 37/85 (43%)
Frame = +1
Query: 511 TWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGV 690
T V+ TL GH+E V ++ S + + S D ++ WD+ + + H V +
Sbjct: 207 TGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCL 266
Query: 691 CWDPKGQYITSTSTDRVFRAFDVST 765
P + + D V R +D+ T
Sbjct: 267 ALHPTLDVLLTGGRDSVCRVWDIRT 291
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/86 (24%), Positives = 34/86 (39%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWD 699
V ++ GH+ V ++ L +G D+ VWDI LS H V V
Sbjct: 252 VIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTR 311
Query: 700 PKGQYITSTSTDRVFRAFDVSTXKVV 777
P + + S D + +D+ K +
Sbjct: 312 PTDPQVVTGSHDTTIKFWDLRYGKTM 337
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWD--IHRARYTT----ILSDHKGFV 681
+ +T RGH ++V + WS G QLASG DN + +WD + + TT L +H V
Sbjct: 258 IVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAV 317
Query: 682 QGVCWDP 702
+ + W P
Sbjct: 318 KALAWCP 324
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTL 534
H + V ++WS +GQ LASG +++++ IW + + + T+ + +E K L
Sbjct: 265 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKAL 320
Score = 35.5 bits (78), Expect = 0.040
Identities = 44/171 (25%), Positives = 64/171 (37%), Gaps = 6/171 (3%)
Frame = +1
Query: 265 RLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSP-NGQLLAS---GDD 432
+LASGG D+ V IW S + S + L H AV + W P LLA+ G D
Sbjct: 280 QLASGGNDNVVHIWDRSVASSNST-TQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGD 338
Query: 433 ESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLAS--GSV 606
+I F W + + Q V + WS + +L S G
Sbjct: 339 RTIKF-WNTHTGACLNSVDTGSQ-----------------VCSLLWSKNERELLSSHGFT 380
Query: 607 DNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
N+L +W L+ H V + P G + S + D R ++V
Sbjct: 381 QNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWD-IHRARYTTILSDHKGFVQGVCWD 699
V I+W+ DG +A G ++++ +WD + T+ H+ V + W+
Sbjct: 185 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN 234
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWD--IHRARYTT----ILSDHKGFV 681
+ +T RGH ++V + WS G QLASG DN + +WD + + TT L +H V
Sbjct: 248 IVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAV 307
Query: 682 QGVCWDP 702
+ + W P
Sbjct: 308 KALAWCP 314
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTL 534
H + V ++WS +GQ LASG +++++ IW + + + T+ + +E K L
Sbjct: 255 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKAL 310
Score = 35.5 bits (78), Expect = 0.040
Identities = 44/171 (25%), Positives = 64/171 (37%), Gaps = 6/171 (3%)
Frame = +1
Query: 265 RLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSP-NGQLLAS---GDD 432
+LASGG D+ V IW S + S + L H AV + W P LLA+ G D
Sbjct: 270 QLASGGNDNVVHIWDRSVASSNST-TQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGD 328
Query: 433 ESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLAS--GSV 606
+I F W + + Q V + WS + +L S G
Sbjct: 329 RTIKF-WNTHTGACLNSVDTGSQ-----------------VCSLLWSKNERELLSSHGFT 370
Query: 607 DNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
N+L +W L+ H V + P G + S + D R ++V
Sbjct: 371 QNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWD-IHRARYTTILSDHKGFVQGVCWD 699
V I+W+ DG +A G ++++ +WD + T+ H+ V + W+
Sbjct: 175 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN 224
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 46.8 bits (106), Expect = 2e-05
Identities = 35/117 (29%), Positives = 56/117 (47%)
Frame = +1
Query: 277 GGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWK 456
G D + +W T++ SV + L H+ V V W+ +G LLA+ + ++IW
Sbjct: 66 GSFDGNTCVWENFATDSESVSV-----LRGHESEVKSVSWNASGSLLATCGRDKSVWIW- 119
Query: 457 QKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
E+ P E ++++ +T V L GH EDV + W L S S DN + +W
Sbjct: 120 ----EIQP--EEDDEF-DTIAV---LTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIW 166
Score = 44.8 bits (101), Expect = 7e-05
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 19/155 (12%)
Frame = +1
Query: 340 LEVAADLTRHQKAVNVVRWSPNGQ-LLASGDDESIIFIWKQ---------KLEELSPATE 489
LE L H V V W+P ++AS + + IW+Q KL + +
Sbjct: 10 LEEVQKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFD 69
Query: 490 GEEQYKETWVV----YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA---RY 648
G E + LRGH +V +SW+ GS LA+ D + +W+I +
Sbjct: 70 GNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEF 129
Query: 649 TTI--LSDHKGFVQGVCWDPKGQYITSTSTDRVFR 747
TI L+ H V+ V W P + S S D +
Sbjct: 130 DTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIK 164
Score = 41.5 bits (93), Expect = 6e-04
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
LA+ G D V IW + E + A LT H + V +V W P +L S ++ I
Sbjct: 107 LATCGRDKSVWIWEIQPEEDDE--FDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIK 164
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
IW S +G+ Y + + GH V IS++ G ++ + S D + +W
Sbjct: 165 IW------CSEDEDGD--YNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIW 216
Query: 628 --DIHR 639
DI R
Sbjct: 217 KTDISR 222
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 46.8 bits (106), Expect = 2e-05
Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Frame = +1
Query: 277 GGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWK 456
GG D + I+ +S G +L+ A L +H+ A+ V+R+SP+ + ASGD +W
Sbjct: 329 GGQDGKLHIYSVS----GDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANREAVVWD 384
Query: 457 QKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIH 636
++ +Q K +++ T R + ++WS + +A+GS+D +IV+++
Sbjct: 385 RE----------TKQVKLNNMLFHTAR-----INSLAWSPNNKMVATGSIDTCVIVYEVD 429
Query: 637 R--ARYTTILSDHKGFVQGVCW 696
+ + T + H G V V +
Sbjct: 430 KPASSRITARNAHLGGVNAVAF 451
Score = 35.5 bits (78), Expect = 0.040
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +1
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSD---HKGFVQGVCWDPK 705
R H V I +S DG++ + S D K +++D L+ HKG + V W P
Sbjct: 48 REHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPD 107
Query: 706 GQYITSTSTDRVFRAFDVS 762
+ + + S D+ + ++V+
Sbjct: 108 SKRVLTVSADKSAKVWEVA 126
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 46.4 bits (105), Expect = 2e-05
Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 7/178 (3%)
Frame = +1
Query: 247 EPNDPLRLASGGTDSHVLIW------YLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNG 408
EP + +GG+ + V +W +ST +D T +K V V WSPNG
Sbjct: 111 EPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNG 170
Query: 409 QLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS-MDGS 585
+ LA G + I ++ +L L GH V + +S +D
Sbjct: 171 KRLACGSMDGTICVFDVDRSKL----------------LHQLEGHNMPVRSLVFSPVDPR 214
Query: 586 QLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
L SGS D + + D +S H +V V P G I + S+DR R +D+
Sbjct: 215 VLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDL 272
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG 708
++ GH VL + S DG +A+GS D + +WD+ +S+H V V + P G
Sbjct: 238 SMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPG 297
Score = 32.7 bits (71), Expect = 0.28
Identities = 47/206 (22%), Positives = 75/206 (36%), Gaps = 4/206 (1%)
Frame = +1
Query: 172 MKFA-IPEISWHNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEV 348
MK A + I + D V + + P E P L +G D V +W L++
Sbjct: 1 MKLAGLKSIENAHEDSVWAATWVPATEDR-PALLLTGSLDETVKLWRPD-------ELDL 52
Query: 349 AADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYK 528
T H V + P+G + AS +S + ++ E E W +
Sbjct: 53 VRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPS--EVWGMQF 110
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLI-VWDIHR--ARYTTILSDHKGFVQGVCWD 699
+G +L ++ S + +LI I R A + + K FV V W
Sbjct: 111 EPKG---TILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWS 167
Query: 700 PKGQYITSTSTDRVFRAFDVSTXKVV 777
P G+ + S D FDV K++
Sbjct: 168 PNGKRLACGSMDGTICVFDVDRSKLL 193
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/92 (30%), Positives = 41/92 (44%)
Frame = +1
Query: 190 EISWHNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRH 369
++ HN PV S+ F P DP L SG D HV + E G L ++ H
Sbjct: 195 QLEGHNM-PVRSLVFSPV----DPRVLFSGSDDGHV---NMHDAE-GKTLL---GSMSGH 242
Query: 370 QKAVNVVRWSPNGQLLASGDDESIIFIWKQKL 465
V V SP+G +A+G + + +W K+
Sbjct: 243 TSWVLSVDASPDGGAIATGSSDRTVRLWDLKM 274
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 46.0 bits (104), Expect = 3e-05
Identities = 43/162 (26%), Positives = 71/162 (43%)
Frame = +1
Query: 250 PNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGD 429
P D +A+GG D +W + + AA+L H+ +V+ + +S +GQLLASG
Sbjct: 80 PTDATLVATGGGDDKAFLWKIGNGDW-------AAELPGHKDSVSCLAFSYDGQLLASGG 132
Query: 430 DESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVD 609
+ ++ I+ L +G E WV + RGH+ + +GS D
Sbjct: 133 LDGVVQIFDASSGTLKCVLDGPGAGIE-WVRWHP-RGHI--------------VLAGSED 176
Query: 610 NKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTD 735
L +W+ + Y + S H V + P G+ I + S D
Sbjct: 177 CSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDD 218
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 496 EQYKETWVVYKTLRGHMEDVLDISWS-MDGSQLASGSVDNKLIVWDIHRARYTTILSDHK 672
EQ+ E T GH ++ ++ S D + +A+G D+K +W I + L HK
Sbjct: 54 EQFDENDDSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHK 113
Query: 673 GFVQGVCWDPKGQYITSTSTDRVFRAFDVST 765
V + + GQ + S D V + FD S+
Sbjct: 114 DSVSCLAFSYDGQLLASGGLDGVVQIFDASS 144
Score = 42.3 bits (95), Expect = 3e-04
Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 9/160 (5%)
Frame = +1
Query: 310 LSTTETGSVHL------EVAADLTRHQKAVNVVRWSPNGQ---LLASGDDESIIFIWKQK 462
+S ++ GSVH+ +V + L H +V V++SP+ L A+G + + IW
Sbjct: 258 ISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWD-- 315
Query: 463 LEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA 642
L+ +P + + H E V ++W LA+G + + +WD
Sbjct: 316 LQHSTP---------------RFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLG 360
Query: 643 RYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVS 762
H+ VQ + +I S S D R F+ S
Sbjct: 361 NCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESS 400
Score = 39.5 bits (88), Expect = 0.002
Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 3/173 (1%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
LASGG D V I+ S+ V L + VRW P G ++ +G ++ ++
Sbjct: 128 LASGGLDGVVQIFDASSGTLKCV-------LDGPGAGIEWVRWHPRGHIVLAGSEDCSLW 180
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
+W KE ++ GH +V ++ DG + +GS D LIVW
Sbjct: 181 MWNAD--------------KEAYL--NMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVW 224
Query: 628 DIHRARYTTILSDHKGFVQGV-CWD--PKGQYITSTSTDRVFRAFDVSTXKVV 777
+ I+ H +G+ C D S S D ++ T KVV
Sbjct: 225 NPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVV 277
Score = 33.1 bits (72), Expect = 0.21
Identities = 26/122 (21%), Positives = 50/122 (40%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H V ++P+G+L+ +G D++ + +W K E +G H
Sbjct: 196 HNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPY-------------HT 242
Query: 547 EDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITST 726
E + + + + S SGS D + + +I + + L+ H V+ V + P I
Sbjct: 243 EGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLA 302
Query: 727 ST 732
+T
Sbjct: 303 AT 304
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP-KGQY 714
GH++DVLD+SWS L S S+D + +WD+ + S H +V + ++P Y
Sbjct: 466 GHLDDVLDLSWS-KSQHLLSSSMDKTVRLWDLSSKTCLKVFS-HSDYVTCIQFNPVDDNY 523
Query: 715 ITSTSTDRVFRAFDVSTXKVV 777
S S D R + + +VV
Sbjct: 524 FISGSLDAKVRIWSIPDHQVV 544
Score = 34.7 bits (76), Expect = 0.070
Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Frame = +1
Query: 355 DLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTL 534
++ H+ ++ +++S +G+ LAS ++ +I IWK E ++ ++ + L
Sbjct: 358 EIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLFLL 417
Query: 535 RGHMEDVLDISWSMDGS---QLASGSVDNKLIVWDIHRARYTTILS--DHKGFVQGVCWD 699
+ + +S G S S+DN L+ + + S H V + W
Sbjct: 418 ANGSPEPVSMSPKRRGRTSFSRKSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSWS 477
Query: 700 PKGQYITSTSTDRVFRAFDVST 765
K Q++ S+S D+ R +D+S+
Sbjct: 478 -KSQHLLSSSMDKTVRLWDLSS 498
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSP-NGQLLASGDDESII 444
+ASG DS V IW L T+ LEV L+ H VN V W+P N ++LAS D+ I
Sbjct: 458 IASGSEDSQVYIWNLKNTKP----LEV---LSGHSMTVNCVSWNPKNPRMLASASDDQTI 510
Query: 445 FIW 453
IW
Sbjct: 511 RIW 513
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 574 MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG-QYITSTSTDRVFR 747
+D S +ASGS D+++ +W++ + +LS H V V W+PK + + S S D+ R
Sbjct: 453 LDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIR 511
Score = 37.5 bits (83), Expect = 0.010
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 2/133 (1%)
Frame = +1
Query: 343 EVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVV 522
E L H+ V V++S +G+ LA+ + IWK + + + K T
Sbjct: 215 ETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKV-------LDDNKVELKHT--- 264
Query: 523 YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYT-TILSDHKGFVQGVC-W 696
L H V +SWS D ++L + L +WD+ T +++ GF C W
Sbjct: 265 ---LESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAW 321
Query: 697 DPKGQYITSTSTD 735
P + S+D
Sbjct: 322 FPDSTRLVCGSSD 334
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
LA+ +D +IW + +E+ L HQ V+ V WSP+ L + + ++
Sbjct: 239 LATASSDCTAIIWKVLDDNK----VELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLK 294
Query: 448 IW 453
+W
Sbjct: 295 LW 296
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP-KGQY 714
GH D+LDISWS + ++L S SVDN + +W I I S H +V V ++P +
Sbjct: 354 GHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDH 411
Query: 715 ITSTSTDRVFRAFDVSTXKVV 777
S S D R + S +VV
Sbjct: 412 FISGSIDGKVRIWSASQCQVV 432
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +1
Query: 574 MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAF 753
+D SGS+D K+ +W + + +D +G V VC+ P GQ + + R +
Sbjct: 407 VDDDHFISGSIDGKVRIWSASQCQVVD-WADARGIVTAVCYQPDGQAVIIGTLTSDCRFY 465
Query: 754 DVS 762
+VS
Sbjct: 466 NVS 468
Score = 31.5 bits (68), Expect = 0.65
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 418 ASGDDES-IIFIWKQKLEELSPATEGEEQYKETWVVYK--TLRGHMEDVLDISWSMDGSQ 588
A GDD + + ++E + E +++ KE ++K ++ H +L + +S DG
Sbjct: 207 AGGDDNGGEVAVCGSRIERVK-VKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRY 265
Query: 589 LASGSVDNKLIVWDI 633
LAS D L VW +
Sbjct: 266 LASAGEDGVLRVWSV 280
Score = 31.1 bits (67), Expect = 0.86
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +1
Query: 355 DLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW 453
++ H+ A+ +++SP+G+ LAS ++ ++ +W
Sbjct: 246 EIQAHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP-KGQY 714
GH D+LDISWS + ++L S SVDN + +W I I S H +V V ++P +
Sbjct: 354 GHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDH 411
Query: 715 ITSTSTDRVFRAFDVSTXKVV 777
S S D R + S +VV
Sbjct: 412 FISGSIDGKVRIWSASQCQVV 432
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +1
Query: 574 MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAF 753
+D SGS+D K+ +W + + +D +G V VC+ P GQ + + R +
Sbjct: 407 VDDDHFISGSIDGKVRIWSASQCQVVD-WADARGIVTAVCYQPDGQAVIIGTLTSDCRFY 465
Query: 754 DVS 762
+VS
Sbjct: 466 NVS 468
Score = 31.5 bits (68), Expect = 0.65
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 418 ASGDDES-IIFIWKQKLEELSPATEGEEQYKETWVVYK--TLRGHMEDVLDISWSMDGSQ 588
A GDD + + ++E + E +++ KE ++K ++ H +L + +S DG
Sbjct: 207 AGGDDNGGEVAVCGSRIERVK-VKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRY 265
Query: 589 LASGSVDNKLIVWDI 633
LAS D L VW +
Sbjct: 266 LASAGEDGVLRVWSV 280
Score = 31.1 bits (67), Expect = 0.86
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +1
Query: 355 DLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW 453
++ H+ A+ +++SP+G+ LAS ++ ++ +W
Sbjct: 246 EIQAHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 45.6 bits (103), Expect = 4e-05
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +1
Query: 208 RDPVLSVDFQPKAEPNDPLRLASGGTDSHVLI-WYLSTTETGSVHLEVAADLTRHQKAVN 384
+DP+ S D + E P+ L+ G V + S HL H + +
Sbjct: 137 QDPLHSGDTLKEMEEPKPIVLSPSGEFFGVCHNCSIHIWNVASEHLMPKETTLHHTELIT 196
Query: 385 VVRWSPNGQLLASGDDESIIFIWKQK-LEELSPATEGEEQYKETWVVYKTLRGHMEDVLD 561
V + PN ++LA+GD + IWK + E + ++ T T H +V
Sbjct: 197 VFAFHPNQRILAAGDVTGRVLIWKDNGIGEFTSVKTEDDTESCT-----TFNWHSAEVTV 251
Query: 562 ISWSMDGSQLASGSVDNKLIVWDI 633
+++S DG+ L SG +VW++
Sbjct: 252 LNFSSDGALLYSGVKAGDFVVWEL 275
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 45.2 bits (102), Expect = 5e-05
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ- 711
RGH +VLDISWS D + L S S+D + +W + + + H +V V ++P +
Sbjct: 325 RGHTGEVLDISWSKD-NYLLSASMDKTVRLWKVGSNDCLGVFA-HNSYVTSVQFNPVNEN 382
Query: 712 YITSTSTDRVFRAFDVSTXKVV 777
Y S S D R +++S VV
Sbjct: 383 YFMSGSIDGKVRIWNISGCSVV 404
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 199 WHNRDPVLSVDFQPKAEPNDPLRLASGGTD--SHVLIWYLSTTETGSVHLEVAADLTRHQ 372
W +R + E +R +SG D S V + + L + D+ H
Sbjct: 162 WLSRLRSMGCTADTNIESGGRMRASSGYGDVISRVKVKHCKKQAKELSALYQSQDIKAHD 221
Query: 373 KAVNVVRWSPNGQLLASGDDESIIFIWK 456
A+ +++S +G+ LAS ++ I+ +WK
Sbjct: 222 GAILAMKFSNDGKFLASSGEDGIVRVWK 249
Score = 31.5 bits (68), Expect = 0.65
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 595 SGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVS 762
SGS+D K+ +W+I +D K + VC+ P GQ S + R F++S
Sbjct: 386 SGSIDGKVRIWNISGCSVVD-WADLKDIISAVCYRPDGQGGIIGSLNGSCRFFNMS 440
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 493 EEQYKETWVVYKT--LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
++Q KE +Y++ ++ H +L + +S DG LAS D + VW +
Sbjct: 202 KKQAKELSALYQSQDIKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKV 250
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQG 687
ET ++ +GH V+ ++ G LA+ D K++VWD+ T HKG V
Sbjct: 90 ETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSS 149
Query: 688 VCWDPKG--QYITSTSTDRVFRAFDVS 762
+ + P + S S D R +D++
Sbjct: 150 ILFHPDSNKNILISGSDDATVRVWDLN 176
Score = 43.2 bits (97), Expect = 2e-04
Identities = 48/218 (22%), Positives = 83/218 (38%), Gaps = 30/218 (13%)
Frame = +1
Query: 202 HNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGS---VHLEVAADLTRHQ 372
HN D +L+V F K+ SG D + +W L S ++L+ + + H
Sbjct: 445 HNGD-ILAVAFAKKSFSF----FVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499
Query: 373 KAVNVVRWSPNGQLLASGDDESIIFIWK----------------------QKLEELSPAT 486
K +N V + N L+ +G ++ IW+ +++
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTA 559
Query: 487 EGEEQYKETWVV-----YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYT 651
G++ K W + KT GH VL S+ DG+Q S D L +W+++ +
Sbjct: 560 SGDKTVK-IWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECI 618
Query: 652 TILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVST 765
H+ V + K + I + D V + ST
Sbjct: 619 ATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDST 656
Score = 35.1 bits (77), Expect = 0.053
Identities = 19/80 (23%), Positives = 33/80 (41%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWD 699
V T+ G + + ++ S D L S ++ VWD+ + H+G V G+
Sbjct: 52 VKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACH 111
Query: 700 PKGQYITSTSTDRVFRAFDV 759
G + + DR +DV
Sbjct: 112 ASGGLLATAGADRKVLVWDV 131
Score = 33.9 bits (74), Expect = 0.12
Identities = 37/187 (19%), Positives = 76/187 (40%), Gaps = 1/187 (0%)
Frame = +1
Query: 205 NRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVN 384
+++ VLS+D + N + + +G D V +W ++ V T H +
Sbjct: 400 HKEVVLSLDTCVSSSGN--VLIVTGSKDKTVRLWNATSKSCIGVG-------TGHNGDIL 450
Query: 385 VVRWSPNG-QLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLD 561
V ++ SG + + +W L+ +S +E K VV H +D+
Sbjct: 451 AVAFAKKSFSFFVSGSGDRTLKVWS--LDGISEDSEEPINLKTRSVV----AAHDKDINS 504
Query: 562 ISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV 741
++ + + S + +GS D +W + + L HK + V + Q + + S D+
Sbjct: 505 VAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKT 564
Query: 742 FRAFDVS 762
+ + +S
Sbjct: 565 VKIWAIS 571
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI----HRARYTTILSDHKGFVQGVCWD 699
L H ++V + +S +G LAS S D I+W+I H + T++ HK + + W
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVI-AILWS 328
Query: 700 PKGQYITSTSTDRVFRAFDVSTXKVV 777
P + + + + V R +DV + V
Sbjct: 329 PDDRQVLTCGAEEVIRRWDVDSGDCV 354
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSP-NGQLLASGDDESII 444
+ASG DS V IW+ ST ++ +L H AVN V WSP N +LAS D+ I
Sbjct: 504 IASGSEDSQVYIWHRSTG-------KLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTI 556
Query: 445 FIW 453
IW
Sbjct: 557 RIW 559
Score = 43.6 bits (98), Expect = 2e-04
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Frame = +1
Query: 343 EVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVV 522
+ A L H V +++S NG+ LAS + IW E+S +G K T V
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIW-----EIS--ADGHISLKHTLV- 316
Query: 523 YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGV-C-W 696
GH + V+ I WS D Q+ + + + WD+ + KG + + C W
Sbjct: 317 -----GHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSG--DCVHMYEKGGISPISCGW 369
Query: 697 DPKGQYITSTSTDRVFRAFDV 759
P GQ I + TDR +D+
Sbjct: 370 YPDGQGIIAGMTDRSICMWDL 390
Score = 41.1 bits (92), Expect = 8e-04
Identities = 35/163 (21%), Positives = 59/163 (36%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
LAS D +IW +S H+ + L H K V + WSP+ + + + E +I
Sbjct: 289 LASSSKDQTAIIWEISADG----HISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIR 344
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
W G+ V+ +G + + W DG + +G D + +W
Sbjct: 345 RW--------DVDSGD-------CVHMYEKGGISPI-SCGWYPDGQGIIAGMTDRSICMW 388
Query: 628 DIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFD 756
D+ V + G+++ S D V FD
Sbjct: 389 DLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD 431
Score = 34.3 bits (75), Expect = 0.092
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 589 LASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTD 735
+ASGS D+++ +W + L H G V V W P ++ ++++D
Sbjct: 504 IASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASD 552
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 44.8 bits (101), Expect = 7e-05
Identities = 37/174 (21%), Positives = 76/174 (43%)
Frame = +1
Query: 250 PNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGD 429
PN L SG + ++ +W L E+ ++ +++ V+ W +G ++ + +
Sbjct: 135 PNQT-ELISGDQNGNIRVWDL---RADLCSCELVPEVGTPIRSLTVM-W--DGTMVVAAN 187
Query: 430 DESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVD 609
D ++W+ L E TE E +K L+ H +L S LA+ S D
Sbjct: 188 DRGTCYVWRS-LCERQTMTEFEPLHK--------LQAHNSHILKCLLSPGNKYLATASSD 238
Query: 610 NKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXK 771
+ +W++ + +L+ H+ +V + G+Y+ + S+D R + + K
Sbjct: 239 KTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGK 292
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHK 672
K L GH V D +SMDG L + S D +W + + + H+
Sbjct: 253 KVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHR 301
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP-KGQ 711
+GH+ ++LD+SWS G L S SVD + +W + + H FV V ++P
Sbjct: 319 KGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDN 376
Query: 712 YITSTSTDRVFRAFDVSTXKVV 777
Y S S D R +DV+ +VV
Sbjct: 377 YFISGSIDGKVRIWDVTRCRVV 398
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 574 MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCW--DPKGQYITS-TSTDRVF 744
+D + SGS+D K+ +WD+ R R +D + V VC+ D KG I S T R +
Sbjct: 373 VDDNYFISGSIDGKVRIWDVTRCRVVD-YTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFY 431
Query: 745 RAFD 756
F+
Sbjct: 432 HIFE 435
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = +1
Query: 355 DLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEE 498
+ + H ++ +++SP+G+ +AS ++ ++ +W EE + E E
Sbjct: 213 EFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAE 260
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 412 LLASGDDESIIFIWKQKLEELSPATEGEEQYKE--TWVVYKTLRGHMEDVLDISWSMDGS 585
+L S D ES+ + +L +++ ++Q+KE + + + H +L + +S DG
Sbjct: 176 VLESMDCESV----RTQLHQVARVQTHKKQFKELSSMCIDQEFSAHDGSILAMKFSPDGK 231
Query: 586 QLASGSVDNKLIVWDI 633
+AS D + VW I
Sbjct: 232 YIASAGEDCVVRVWSI 247
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP-KGQ 711
+GH+ ++LD+SWS G L S SVD + +W + + H FV V ++P
Sbjct: 319 KGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDN 376
Query: 712 YITSTSTDRVFRAFDVSTXKVV 777
Y S S D R +DV+ +VV
Sbjct: 377 YFISGSIDGKVRIWDVTRCRVV 398
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 574 MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCW--DPKGQYITS-TSTDRVF 744
+D + SGS+D K+ +WD+ R R +D + V VC+ D KG I S T R +
Sbjct: 373 VDDNYFISGSIDGKVRIWDVTRCRVVD-YTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFY 431
Query: 745 RAFD 756
F+
Sbjct: 432 HIFE 435
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = +1
Query: 355 DLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEE 498
+ + H ++ +++SP+G+ +AS ++ ++ +W EE + E E
Sbjct: 213 EFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAE 260
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 412 LLASGDDESIIFIWKQKLEELSPATEGEEQYKE--TWVVYKTLRGHMEDVLDISWSMDGS 585
+L S D ES+ + +L +++ ++Q+KE + + + H +L + +S DG
Sbjct: 176 VLESMDCESV----RTQLHQVARVQTHKKQFKELSSMCIDQEFSAHDGSILAMKFSPDGK 231
Query: 586 QLASGSVDNKLIVWDI 633
+AS D + VW I
Sbjct: 232 YIASAGEDCVVRVWSI 247
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 44.4 bits (100), Expect = 9e-05
Identities = 31/118 (26%), Positives = 49/118 (41%)
Frame = +1
Query: 403 NGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDG 582
N ++ + + I +WK T+ ++ Y V + L GH V D+ S DG
Sbjct: 27 NSDIIVTASRDKSIILWK--------LTKDDKSYG---VAQRRLTGHSHFVEDVVLSSDG 75
Query: 583 SQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFD 756
SGS D +L +WD+ T H V V + + I S S DR + ++
Sbjct: 76 QFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Score = 38.7 bits (86), Expect = 0.004
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 2/168 (1%)
Frame = +1
Query: 274 SGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW 453
SG D + +W L+T ET H K V V +S + + + S + I +W
Sbjct: 80 SGSWDGELRLWDLATGET-------TRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 454 KQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDG--SQLASGSVDNKLIVW 627
E +EG+ GH E V + +S + + S S D + VW
Sbjct: 133 NTLGECKYTISEGD--------------GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Query: 628 DIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXK 771
++ + L H G++ V P G S D V +D++ K
Sbjct: 179 NLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 38.7 bits (86), Expect = 0.004
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Frame = +1
Query: 271 ASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFI 450
ASGG D +L+W L+ E ++ A + ++ + +SPN L + + SI I
Sbjct: 209 ASGGKDGVILLWDLA--EGKKLYSLEAGSI------IHSLCFSPNRYWLCAATENSIR-I 259
Query: 451 W----KQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVL---DISWSMDGSQLASGSVD 609
W K +E+L + E + E V G+ + V+ ++WS DGS L SG D
Sbjct: 260 WDLESKSVVEDLKVDLKSEAEKNEGGVG----TGNQKKVIYCTSLNWSADGSTLFSGYTD 315
Query: 610 NKLIVWDIHR 639
+ VW I R
Sbjct: 316 GVVRVWGIGR 325
Score = 34.7 bits (76), Expect = 0.070
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +1
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQL-ASGSVDNKLIVWDIHR--ARYTTI---LSDH 669
E V+ +R H + V I+ +D S + + S D +I+W + + Y L+ H
Sbjct: 3 EGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGH 62
Query: 670 KGFVQGVCWDPKGQYITSTSTDRVFRAFDVST 765
FV+ V GQ+ S S D R +D++T
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRLWDLAT 94
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/81 (23%), Positives = 38/81 (46%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG 708
TL GH++ + + + + + S S D + +W+ ++L+ H +V + PK
Sbjct: 88 TLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
Query: 709 QYITSTSTDRVFRAFDVSTXK 771
+ S S D+ R +D+ K
Sbjct: 148 DLVVSASLDQTVRVWDIGALK 168
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 1/118 (0%)
Frame = +1
Query: 328 GSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYK 507
G V V L H + VN + P L+ SG D+ + +W+
Sbjct: 190 GGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMN-------------ET 236
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWD-IHRARYTTILSDHKGF 678
+ W V TLRGHM +V + + + S S D + VWD R T +H F
Sbjct: 237 KAWEV-DTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRF 293
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 44.4 bits (100), Expect = 9e-05
Identities = 33/118 (27%), Positives = 58/118 (49%)
Frame = +1
Query: 274 SGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW 453
+G D + +W + H + A LT+H AVN + S +G++L SG + I +W
Sbjct: 251 TGSADKKIKVW----NKKDKKH-SLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVW 305
Query: 454 KQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
++ + G+++ VV LRGH + ++ ++ + D + SGS D L VW
Sbjct: 306 ERLI-------NGDDEELHMSVV-GALRGHRKAIMCLAVASD--LVLSGSADKSLRVW 353
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/88 (26%), Positives = 41/88 (46%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H A+N + S +G + +G + I +W +K ++ S + TL H+
Sbjct: 234 HDDAINAIVVSKDG-FVYTGSADKKIKVWNKKDKKHS--------------LVATLTKHL 278
Query: 547 EDVLDISWSMDGSQLASGSVDNKLIVWD 630
V ++ S DG L SG+ D ++VW+
Sbjct: 279 SAVNALAISEDGKVLYSGACDRSILVWE 306
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 44.0 bits (99), Expect = 1e-04
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWS-PNGQLLASGDDESII 444
L SG D + +W +S T T V L HQ + V W N + S D+ +
Sbjct: 185 LLSGSQDQRICLWDVSATATDKV-LNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQL 243
Query: 445 FIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIV 624
IW + ++ + + + E + Y + E VL A+ S D+ + +
Sbjct: 244 VIWDLRTNQM----QHQVKVHEREINYLSFNPFNEWVL-----------ATASSDSTVAL 288
Query: 625 WDIHRARYTT-ILSDHKGFVQGVCWDPKGQ-YITSTSTDRVFRAFDVS 762
+D+ + +LS H+G V V WDP + + S+ DR +D++
Sbjct: 289 FDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDIN 336
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQ-LLASGDDESII 444
LA+ +DS V ++ L T +H+ L++H+ V V W PN + +LAS ++ +
Sbjct: 277 LATASSDSTVALFDLRKL-TAPLHV-----LSKHEGEVFQVEWDPNHETVLASSGEDRRL 330
Query: 445 FIW---KQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGS-QLASGSVDN 612
+W + E+L + E+ E + GH + D +W+ D ++S + DN
Sbjct: 331 MVWDINRVGDEQLEIELDAEDGPPELLFSH---GGHKAKISDFAWNKDEPWVISSVAEDN 387
Query: 613 KLIVWDIHRARY 648
L VW + + Y
Sbjct: 388 SLQVWQMAESIY 399
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +1
Query: 532 LRGHMEDVLDISWS-MDGSQLASGSVDNKLIVWDIHRARYTTILS------DHKGFVQGV 690
L GH ++ ++WS L SGS D ++ +WD+ +L+ H+ ++ V
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDV 224
Query: 691 CWDPKGQYITSTSTD 735
W K + I ++ D
Sbjct: 225 AWHMKNENIFGSAGD 239
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 232 FQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAAD 357
FQ + +PN LAS G D +++W ++ G LE+ D
Sbjct: 309 FQVEWDPNHETVLASSGEDRRLMVWDIN--RVGDEQLEIELD 348
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHR-ARYTTILSDHKGFVQGVCWDP 702
+TL GH++ +W DG ++G+ D VWDI ++ T+L + G ++ + +
Sbjct: 313 ETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTS 372
Query: 703 KGQYITSTSTDRVFRAFDVS 762
G+Y+ +DVS
Sbjct: 373 DGKYMAMAEPADFVHVYDVS 392
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +1
Query: 565 SWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVF 744
S S DG LA + + ++ D + + LS H F W P G ++ + D+
Sbjct: 284 SLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTC 343
Query: 745 RAFDV 759
R +D+
Sbjct: 344 RVWDI 348
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/117 (18%), Positives = 47/117 (40%)
Frame = +1
Query: 394 WSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS 573
W P+G ++G+ + +W + LS + L+G++ + I ++
Sbjct: 327 WHPDGVTFSTGNQDKTCRVWD--IRNLSQSVT-------------VLKGNLGAIRSIRYT 371
Query: 574 MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVF 744
DG +A + + V+D+ T D G + G+ + P + + DR +
Sbjct: 372 SDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSPDTEALFIGVWDRTY 428
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/115 (28%), Positives = 49/115 (42%)
Frame = +1
Query: 412 LLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQL 591
++ S D+SII +WK E+ K V + + GH V D+ S DG
Sbjct: 31 IVTSSRDKSII-LWKLTKED-----------KSYGVAQRRMTGHSHFVQDVVLSSDGQFA 78
Query: 592 ASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFD 756
SGS D +L +WD+ T H V V + + I S S DR + ++
Sbjct: 79 LSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Score = 39.1 bits (87), Expect = 0.003
Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 2/168 (1%)
Frame = +1
Query: 274 SGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW 453
SG D + +W L+T E+ H K V V +S + + + S + I +W
Sbjct: 80 SGSWDGELRLWDLATGES-------TRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 454 KQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDG--SQLASGSVDNKLIVW 627
T GE +Y GH E V + +S + + S S D + VW
Sbjct: 133 N---------TLGECKY-----TISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Query: 628 DIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXK 771
++ + L+ H G++ V P G S D V +D++ K
Sbjct: 179 NLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 35.9 bits (79), Expect = 0.030
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Frame = +1
Query: 271 ASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFI 450
ASGG D +L+W L+ E ++ A + ++ + +SPN L + + SI I
Sbjct: 209 ASGGKDGVILLWDLA--EGKKLYSLEAGSI------IHSLCFSPNRYWLCAATENSIR-I 259
Query: 451 W----KQKLEELSP--ATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDN 612
W K +E+L E E+ T + KT + ++WS DG+ L SG D
Sbjct: 260 WDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKT---KVIYCTSLNWSADGNTLFSGYTDG 316
Query: 613 KLIVWDIHR 639
+ VW I R
Sbjct: 317 VIRVWGIGR 325
Score = 34.3 bits (75), Expect = 0.092
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +1
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQ-LASGSVDNKLIVWDIHRA--RYTTI---LSDH 669
E V+ T+ H + V I+ +D S + + S D +I+W + + Y ++ H
Sbjct: 3 EGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGH 62
Query: 670 KGFVQGVCWDPKGQYITSTSTDRVFRAFDVST 765
FVQ V GQ+ S S D R +D++T
Sbjct: 63 SHFVQDVVLSSDGQFALSGSWDGELRLWDLAT 94
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +1
Query: 517 VVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCW 696
++ KT + H +V D+ + D ++ S D ++ WD+ R H G V V +
Sbjct: 51 ILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKF 110
Query: 697 DPKGQYITSTSTDRVFRAFDVSTXKV 774
+ + S DR R +D + V
Sbjct: 111 NDSSSVVVSAGFDRSLRVWDCRSHSV 136
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/82 (26%), Positives = 34/82 (41%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ 711
L+GH VL ++ DG+ + D + +W+ HR H V+ V
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 712 YITSTSTDRVFRAFDVSTXKVV 777
S DR +DVST +V+
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVI 95
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 43.6 bits (98), Expect = 2e-04
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Frame = +1
Query: 352 ADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKT 531
A L RH+ A++V+R+SP+ + AS D +W + E+ K
Sbjct: 485 AVLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMK---------------LKN 529
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHR--ARYTTILSDHKGFVQGVCWDPK 705
+ H + ++WS + + +A+GS+D +IV+++ + + TI H G V G+ +
Sbjct: 530 MLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGF-AD 588
Query: 706 GQYITSTSTDRVFRAF 753
++ S+ D R +
Sbjct: 589 DSHVVSSGEDACIRVW 604
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSD---HKGFVQGVCWDPK 705
R H V + ++ DGS+ + S D K I++D LS HKG + V W P
Sbjct: 184 REHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPD 243
Query: 706 GQYITSTSTDRVFRAFDVS 762
G+ + + S D+ + +D+S
Sbjct: 244 GKQVLTVSADKSAKIWDIS 262
Score = 36.7 bits (81), Expect = 0.017
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQ--LLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRG 540
H VN VR++P+G + S D + II+ K E L + + G
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKT-CEILGELSSDD--------------G 230
Query: 541 HMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
H + +SWS DG Q+ + S D +WDI
Sbjct: 231 HKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
Score = 35.9 bits (79), Expect = 0.030
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H V R+SPNG+ +ASGD + IW + K +K L G +
Sbjct: 55 HAYPATVARYSPNGEWIASGDVSGTVRIW---------GAYNDHVLKNE---FKVLAGRI 102
Query: 547 EDVLDISWSMDGSQL-ASGSVDNKLIV 624
+ D+ WS DG ++ ASG K +V
Sbjct: 103 D---DLQWSADGMRIVASGDGKGKSLV 126
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP-K 705
+ +GH++DVLD++WS L S S+D + +W++ + S H +V + ++P
Sbjct: 508 SFQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVD 565
Query: 706 GQYITSTSTDRVFRAFDVSTXKVV 777
+Y S S D R + + +VV
Sbjct: 566 DRYFISGSLDAKVRVWSIPDRQVV 589
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 505 KETWVVYKT--LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA 642
KE +YKT ++ H + I +S+DG LAS D + +W + A
Sbjct: 398 KELTALYKTQEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEA 445
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG 708
+L+GH++ +LD+SWS L S S+D + +WDI + + H +V + + P
Sbjct: 501 SLKGHLDAILDLSWS-KSQLLLSSSMDKTVRLWDIETKTCLKLFA-HNDYVTCIQFSPVD 558
Query: 709 Q-YITSTSTDRVFRAFDVSTXKVV 777
+ Y S S D R + + VV
Sbjct: 559 ENYFLSGSLDAKIRIWSIQDRHVV 582
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 532 LRGHMEDVLDISWS-MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG 708
L H + V I +S +D + SGS+D K+ +W I + R+ SD V C+ P G
Sbjct: 542 LFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSI-QDRHVVEWSDLHEMVTAACYTPDG 600
Query: 709 QYITSTSTDRVFRAFDVSTXKV 774
Q S + RA+D K+
Sbjct: 601 QGALIGSHKGICRAYDTEDCKL 622
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 340 LEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEG 492
L + ++ H+ AV +++S + LASG + +I +W+ + EL EG
Sbjct: 394 LHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEG 444
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +1
Query: 496 EQYKETWVVY--KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDH 669
+ YKE ++ + ++ H V I +S D LASG D + VW++ ++
Sbjct: 386 KSYKELSALHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGS 445
Query: 670 KGFVQGVCWDPKGQYIT 720
+ D G IT
Sbjct: 446 LTPIHPSLCDSSGNEIT 462
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/88 (28%), Positives = 44/88 (50%)
Frame = +1
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQG 687
ET+++ + +GH DV +++S D LA+G+ DNK+ VW++ ++H V
Sbjct: 339 ETYILKQ--QGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTA 396
Query: 688 VCWDPKGQYITSTSTDRVFRAFDVSTXK 771
+ + + S S D RA+D K
Sbjct: 397 LHFMADNHSLLSASLDGTVRAWDFKRYK 424
Score = 39.5 bits (88), Expect = 0.002
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 2/174 (1%)
Frame = +1
Query: 256 DPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDE 435
D LA+G D+ V +W + + G+ + T H AV + + + L S +
Sbjct: 360 DSQLLATGADDNKVKVWNVMS---GTCFIT----FTEHTNAVTALHFMADNHSLLSASLD 412
Query: 436 SIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM-EDVLDISWSMDGSQLASGSVDN 612
+ W K +YK YKT + ++ G + +G++D+
Sbjct: 413 GTVRAWDFK------------RYKN----YKTYTTPTPRQFVSLTADPSGDVVCAGTLDS 456
Query: 613 -KLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXK 771
++ VW + ILS H+ V G+ + P Q + S+S D R +DV K
Sbjct: 457 FEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK 510
Score = 37.1 bits (82), Expect = 0.013
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 1/124 (0%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H VN V +SP+ QLLA+G D++ + +W + + T H
Sbjct: 348 HYFDVNCVTYSPDSQLLATGADDNKVKVWNVM----------------SGTCFITFTEHT 391
Query: 547 EDVLDISWSMDGSQLASGSVDNKLIVWDIHRAR-YTTILSDHKGFVQGVCWDPKGQYITS 723
V + + D L S S+D + WD R + Y T + + DP G + +
Sbjct: 392 NAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCA 451
Query: 724 TSTD 735
+ D
Sbjct: 452 GTLD 455
Score = 35.1 bits (77), Expect = 0.053
Identities = 23/84 (27%), Positives = 38/84 (45%)
Frame = +1
Query: 505 KETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQ 684
K+T + L GH V + +S LAS S D + +WD+ ++ T H V
Sbjct: 464 KKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVL 523
Query: 685 GVCWDPKGQYITSTSTDRVFRAFD 756
V + P G+ + S++ D +D
Sbjct: 524 TVAFRPDGKQLASSTLDGQINFWD 547
Score = 28.7 bits (61), Expect = 4.6
Identities = 24/90 (26%), Positives = 41/90 (45%)
Frame = +1
Query: 379 VNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVL 558
V +++SPNG+ +A G + ++ IW+ SP G + + +T + V+
Sbjct: 96 VGALKFSPNGKFIAVGIGK-LVEIWR------SP---GFRRAVLPFERVRTFANSDDKVV 145
Query: 559 DISWSMDGSQLASGSVDNKLIVWDIHRARY 648
+ WS+D L GS D + I R Y
Sbjct: 146 SLEWSLDSDYLLVGSRDLAARAFTIARDGY 175
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/88 (28%), Positives = 44/88 (50%)
Frame = +1
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQG 687
ET+++ + +GH DV +++S D LA+G+ DNK+ VW++ ++H V
Sbjct: 379 ETYILKQ--QGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTA 436
Query: 688 VCWDPKGQYITSTSTDRVFRAFDVSTXK 771
+ + + S S D RA+D K
Sbjct: 437 LHFMADNHSLLSASLDGTVRAWDFKRYK 464
Score = 39.5 bits (88), Expect = 0.002
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 2/174 (1%)
Frame = +1
Query: 256 DPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDE 435
D LA+G D+ V +W + + G+ + T H AV + + + L S +
Sbjct: 400 DSQLLATGADDNKVKVWNVMS---GTCFIT----FTEHTNAVTALHFMADNHSLLSASLD 452
Query: 436 SIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM-EDVLDISWSMDGSQLASGSVDN 612
+ W K +YK YKT + ++ G + +G++D+
Sbjct: 453 GTVRAWDFK------------RYKN----YKTYTTPTPRQFVSLTADPSGDVVCAGTLDS 496
Query: 613 -KLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXK 771
++ VW + ILS H+ V G+ + P Q + S+S D R +DV K
Sbjct: 497 FEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK 550
Score = 37.1 bits (82), Expect = 0.013
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 1/124 (0%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H VN V +SP+ QLLA+G D++ + +W + + T H
Sbjct: 388 HYFDVNCVTYSPDSQLLATGADDNKVKVWNVM----------------SGTCFITFTEHT 431
Query: 547 EDVLDISWSMDGSQLASGSVDNKLIVWDIHRAR-YTTILSDHKGFVQGVCWDPKGQYITS 723
V + + D L S S+D + WD R + Y T + + DP G + +
Sbjct: 432 NAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCA 491
Query: 724 TSTD 735
+ D
Sbjct: 492 GTLD 495
Score = 35.1 bits (77), Expect = 0.053
Identities = 23/84 (27%), Positives = 38/84 (45%)
Frame = +1
Query: 505 KETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQ 684
K+T + L GH V + +S LAS S D + +WD+ ++ T H V
Sbjct: 504 KKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVL 563
Query: 685 GVCWDPKGQYITSTSTDRVFRAFD 756
V + P G+ + S++ D +D
Sbjct: 564 TVAFRPDGKQLASSTLDGQINFWD 587
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = +1
Query: 379 VNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVL 558
V +++SPNG+ +A G + ++ IW+ SP G + + +T + V+
Sbjct: 96 VGALKFSPNGKFIAVGIGK-LVEIWR------SP---GFRRAVLPFERVRTFANSDDKVV 145
Query: 559 DISWSMDGSQLASGSVD 609
+ WS+D L GS D
Sbjct: 146 SLEWSLDSDYLLVGSRD 162
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Frame = +1
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
L H+ AV + +G+ + +G D+ ++ IW ET + + R
Sbjct: 301 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSM----------------ETALCLASCR 344
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG--- 708
GH D+ D++ S + + +AS S D + VW + ++L H G V + + P+
Sbjct: 345 GHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASV 404
Query: 709 QYITSTSTDRVFRAFD 756
+ S+S D R +D
Sbjct: 405 YQLLSSSDDGTCRIWD 420
Score = 34.3 bits (75), Expect = 0.092
Identities = 19/76 (25%), Positives = 30/76 (39%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK 705
K LRGH V + G + +GS D + +W + A H+G + +
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSN 358
Query: 706 GQYITSTSTDRVFRAF 753
+ S S D V R +
Sbjct: 359 NALVASASNDFVIRVW 374
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEE--LSPATEGEEQYKETWVV------ 522
H+ + +++SP+G+ LA+G ++ ++ IW+ L + L+ +E + +
Sbjct: 197 HKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASFLRQQEPINQQAALVLFPQK 256
Query: 523 --------YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGF 678
++ L GH DVLD++WS D + L S S D + +W + + H +
Sbjct: 257 AFHIEETPFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVF-HHNNY 314
Query: 679 VQGVCWDPKGQ-YITSTSTDRVFRAFDVSTXKVV 777
V V ++P + S S D R + +S +VV
Sbjct: 315 VTCVEFNPVNKNNFASGSIDGKARIWGLSEERVV 348
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
+ GH + + +S DG LA+G D + +W I
Sbjct: 194 INGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRI 227
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/118 (27%), Positives = 49/118 (41%)
Frame = +1
Query: 403 NGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDG 582
N ++ S + I +WK T+ ++ Y V + L GH V D+ S DG
Sbjct: 27 NADIIVSASRDKSIILWK--------LTKDDKAYG---VAQRRLTGHSHFVEDVVLSSDG 75
Query: 583 SQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFD 756
SGS D +L +WD+ T H V V + + I S S DR + ++
Sbjct: 76 QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 133
Score = 37.9 bits (84), Expect = 0.007
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +1
Query: 175 KFAIPEISWHNRDPVLSVDFQPKA-EPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVA 351
K+ I E +RD V V F P +P + S D V +W LS + S
Sbjct: 139 KYTISEGGEGHRDWVSCVRFSPNTLQPT----IVSASWDKTVKVWNLSNCKLRST----- 189
Query: 352 ADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW 453
L H V+ V SP+G L ASG + ++ +W
Sbjct: 190 --LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 221
Score = 37.5 bits (83), Expect = 0.010
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Frame = +1
Query: 271 ASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFI 450
ASGG D VL+W L+ G + A+ ++ + +SPN L + + I I
Sbjct: 210 ASGGKDGVVLLWDLAE---GKKLYSLEAN-----SVIHALCFSPNRYWLCAATEHGIK-I 260
Query: 451 W----KQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKL 618
W K +E+L + E + + T R + ++WS DGS L SG D +
Sbjct: 261 WDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIY-CTSLNWSADGSTLFSGYTDGVI 319
Query: 619 IVWDIHR 639
VW I R
Sbjct: 320 RVWGIGR 326
Score = 37.1 bits (82), Expect = 0.013
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H K V V +S + + + S + I +W T GE +Y + + GH
Sbjct: 104 HTKDVLSVAFSLDNRQIVSASRDRTIKLWN---------TLGECKY----TISEGGEGHR 150
Query: 547 EDVLDISWSMDGSQ--LASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYIT 720
+ V + +S + Q + S S D + VW++ + + L+ H G+V V P G
Sbjct: 151 DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCA 210
Query: 721 STSTDRVFRAFDVSTXK 771
S D V +D++ K
Sbjct: 211 SGGKDGVVLLWDLAEGK 227
Score = 35.1 bits (77), Expect = 0.053
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +1
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQL-ASGSVDNKLIVWDIHR--ARYTTI---LSDH 669
E V+ T+R H + V I+ +D + + S S D +I+W + + Y L+ H
Sbjct: 3 EGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH 62
Query: 670 KGFVQGVCWDPKGQYITSTSTDRVFRAFDVS 762
FV+ V GQ+ S S D R +D++
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRLWDLA 93
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 42.7 bits (96), Expect = 3e-04
Identities = 33/137 (24%), Positives = 60/137 (43%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H+++V + + G +L SG E ++ +W P T G + K LRGH
Sbjct: 212 HKESVYALAMNDTGTMLVSGGTEKVLRVW-------DPRT-GSKSMK--------LRGHT 255
Query: 547 EDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITST 726
++V + G SGS D+ + +WD+ + R + H V + +P ++ S
Sbjct: 256 DNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSG 315
Query: 727 STDRVFRAFDVSTXKVV 777
D+ D++T + V
Sbjct: 316 GRDQCLYLTDLATRESV 332
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +1
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQY 714
+GH E V ++ + G+ L SG + L VWD + L H V+ + D G++
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 715 ITSTSTDRVFRAFDV 759
S S+D + R +D+
Sbjct: 270 CLSGSSDSMIRLWDL 284
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 42.7 bits (96), Expect = 3e-04
Identities = 33/137 (24%), Positives = 60/137 (43%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H+++V + + G +L SG E ++ +W P T G + K LRGH
Sbjct: 212 HKESVYALAMNDTGTMLVSGGTEKVLRVW-------DPRT-GSKSMK--------LRGHT 255
Query: 547 EDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITST 726
++V + G SGS D+ + +WD+ + R + H V + +P ++ S
Sbjct: 256 DNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSG 315
Query: 727 STDRVFRAFDVSTXKVV 777
D+ D++T + V
Sbjct: 316 GRDQCLYLTDLATRESV 332
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +1
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQY 714
+GH E V ++ + G+ L SG + L VWD + L H V+ + D G++
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 715 ITSTSTDRVFRAFDV 759
S S+D + R +D+
Sbjct: 270 CLSGSSDSMIRLWDL 284
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 562 ISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV 741
I S+DG + SG +D L +WDI + + ++ H V V G I ++ D V
Sbjct: 363 ICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNV 422
Query: 742 FRAFDVSTXKV 774
FD T ++
Sbjct: 423 HNVFDTRTLEI 433
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Frame = +1
Query: 484 TEGEEQYKETW-----VVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARY 648
T G+++ + W + K+L G + ++LD++ + D + + + N L VWD+ R
Sbjct: 248 TGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRV 307
Query: 649 TTILSDHKGFVQGVCWDP-KGQYITSTSTDRVFRAFDV 759
L+ H V V +++ S + DR + +D+
Sbjct: 308 RHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDL 345
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 42.3 bits (95), Expect = 3e-04
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = +1
Query: 403 NGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDG 582
NG L A G I +WK AT E + + +L GH +V +++ G
Sbjct: 222 NGMLFA-GTSSGSILVWK--------ATTDSES--DPFKYLTSLEGHSGEVT--CFAVGG 268
Query: 583 SQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQG-VCWDPKGQYITSTSTDRVFRAFDV 759
L SGSVD + +WD++ + L H G V +CWD + + S+S D + +
Sbjct: 269 QMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWD---KCLISSSLDGTIKVWAY 325
Query: 760 S 762
S
Sbjct: 326 S 326
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA 642
+ +T GH E+V + WS G +LASG DN + +WD HR+
Sbjct: 210 IVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWD-HRS 249
Score = 35.1 bits (77), Expect = 0.053
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQK-LEELSPATEGEEQYKETWVVYKTLRGH 543
H + V ++WS +G+ LASG +++++ IW + + +P + +++E H
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEE----------H 266
Query: 544 MEDVLDISW-SMDGSQLASGS--VDNKLIVWDIH 636
V ++W S LA+G D K+ W+ H
Sbjct: 267 TAAVRALAWCPFQASLLATGGGVGDGKIKFWNTH 300
Score = 33.1 bits (72), Expect = 0.21
Identities = 40/168 (23%), Positives = 62/168 (36%), Gaps = 3/168 (1%)
Frame = +1
Query: 265 RLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSP-NGQLLASGDDESI 441
+LASGG D+ V IW + + + + H AV + W P LLA+G
Sbjct: 232 KLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGG--- 288
Query: 442 IFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLAS--GSVDNK 615
+ K++ + T ET V + WS +L S G N+
Sbjct: 289 --VGDGKIKFWNTHTGACLNSVETG----------SQVCSLLWSKSERELLSSHGFTQNQ 336
Query: 616 LIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
L +W L+ H V + P G + S + D R ++V
Sbjct: 337 LTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWD-IHRARYTTILSDHKGFVQGVCWD 699
V I+W+ DG LA G ++++ +WD + + T+ H+ V + W+
Sbjct: 137 VTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWN 186
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG 708
TL GH++ + + + + + S S D + +W+ ++L+ H +V + PK
Sbjct: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKE 147
Query: 709 QYITSTSTDRVFRAFDVSTXK 771
+ S S D+ R +D+ +
Sbjct: 148 DLVVSASLDQTVRVWDIGALR 168
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 1/118 (0%)
Frame = +1
Query: 328 GSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYK 507
G V V L H + VN + P L+ SG D+ + +W+
Sbjct: 190 GGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN-------------ET 236
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWD-IHRARYTTILSDHKGF 678
+ W V TLRGHM +V + + + S S D + VWD R T +H F
Sbjct: 237 KAWEV-DTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRF 293
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHR-ARYTTILSDHKGFVQGVCW 696
V +LRGH + +W +G LA+G+ D +WDI + +L + G ++G+ +
Sbjct: 282 VISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKF 341
Query: 697 DPKGQYITSTSTDRVFRAFDVST 765
P+G+++ FD +
Sbjct: 342 TPEGRFLAMAEPADFVHIFDTQS 364
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTST 732
V + S S DG LA + ++ D H + + L HK + W P G + + +
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQ 310
Query: 733 DRVFRAFDV 759
D R +D+
Sbjct: 311 DTACRLWDI 319
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/134 (20%), Positives = 59/134 (44%)
Frame = +1
Query: 343 EVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVV 522
+V + L H+ W PNG +LA+G+ ++ +W + +P+ E++ V
Sbjct: 281 KVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIR----NPS--------ESFAV 328
Query: 523 YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP 702
L+G+M + + ++ +G LA + + ++D + D G + G+ + P
Sbjct: 329 ---LKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQEIDLFGEIAGISFSP 385
Query: 703 KGQYITSTSTDRVF 744
+ + DR +
Sbjct: 386 DTEALYVGVADRTY 399
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 41.5 bits (93), Expect = 6e-04
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 11/143 (7%)
Frame = +1
Query: 370 QKAVNVVRWSPNGQLLASGDDESIIFIWKQKLE-ELSPATEGEEQYKET--------WVV 522
Q+ V + W PNG S I IW ++ G + + W++
Sbjct: 144 QRNVKALEWRPNGGKSLSIACRGGICIWAASYPGNMALVRSGGSALRGSLSRGSGTRWIL 203
Query: 523 YKTLR-GHMEDVLDISWSMDGSQLASGSVD-NKLIVWDIHRARYTTILSDHKGFVQGVCW 696
LR + E + +SWS G LAS S D + +WD+ + T I G + + W
Sbjct: 204 VDFLRCQNDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGAGTPIRRG-LGGISMLKW 262
Query: 697 DPKGQYITSTSTDRVFRAFDVST 765
P G Y + D F ++ +T
Sbjct: 263 SPTGDYFFAARFDGTFCLWETNT 285
Score = 35.5 bits (78), Expect = 0.040
Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 2/120 (1%)
Frame = +1
Query: 364 RHQKAVNVVRWSPNGQLLASGD-DESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRG 540
++ + ++ + WSP G+ LAS D S IW +P G
Sbjct: 210 QNDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGAGTPIRRG---------------- 253
Query: 541 HMEDVLDISWSMDGSQLASGSVDNKLIVWDIHR-ARYTTILSDHKGFVQGVCWDPKGQYI 717
+ + + WS G + D +W+ + LS G V G WDP+G++I
Sbjct: 254 -LGGISMLKWSPTGDYFFAARFDGTFCLWETNTWTSEPWSLSSGSGSVTGAIWDPEGRFI 312
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 41.5 bits (93), Expect = 6e-04
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWS-PNGQLLASGDDESII 444
L SG D + +W +S T V L H+ A+ V W N L S ++ +
Sbjct: 184 LLSGSQDQKICLWDVSATPQDKV-LNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRL 242
Query: 445 FIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIV 624
IW + ++ + + + E V Y + E VL A+ S D+ + +
Sbjct: 243 VIWDTRTNQM----QHQVKVHEREVNYLSFNPFNEWVL-----------ATASSDSTVAL 287
Query: 625 WDIHRARYTT-ILSDHKGFVQGVCWDPKGQ-YITSTSTDRVFRAFDVS 762
+D+ + ++S H+G V V WDP + + S+ DR +D++
Sbjct: 288 FDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLN 335
Score = 32.7 bits (71), Expect = 0.28
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +1
Query: 274 SGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSP-NGQLLASGDDESIIFI 450
S G D ++IW T T + +V H++ VN + ++P N +LA+ +S + +
Sbjct: 235 SAGEDGRLVIW---DTRTNQMQHQVKV----HEREVNYLSFNPFNEWVLATASSDSTVAL 287
Query: 451 WKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQ-LASGSVDNKLIVW 627
+ L +L+ + H +V + W + LAS D +L+VW
Sbjct: 288 FD--LRKLNAPLH-------------VMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVW 332
Query: 628 DIHR 639
D++R
Sbjct: 333 DLNR 336
Score = 32.3 bits (70), Expect = 0.37
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Frame = +1
Query: 232 FQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAAD---------LTRHQKAVN 384
FQ + +PN LAS G D +++W L+ + +E+ A+ H+ ++
Sbjct: 308 FQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKIS 367
Query: 385 VVRWSPNGQ-LLASGDDESIIFIWKQKLEELSPATEGEEQYKE 510
W+ N ++AS +++ + +W Q E + E E KE
Sbjct: 368 DFAWNKNEPWVIASVAEDNSLQVW-QMAESIYRDEEDAEDIKE 409
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Frame = +1
Query: 532 LRGHMEDVLDISWS-MDGSQLASGSVDNKLIVWDIHRARYTTILS------DHKGFVQGV 690
L GH ++ +SWS L SGS D K+ +WD+ +L+ H+ + V
Sbjct: 164 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADV 223
Query: 691 CWDPKGQ 711
W K +
Sbjct: 224 SWHMKNE 230
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHR-ARYTTILSDHKGFVQGVCWDPK 705
TL GH++ +W DG ++G+ D VWDI ++ +L + G ++ + +
Sbjct: 312 TLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYTSD 371
Query: 706 GQYITSTSTDRVFRAFDVS 762
G+Y+ +DVS
Sbjct: 372 GKYMAMAEPADFVHVYDVS 390
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/131 (19%), Positives = 51/131 (38%)
Frame = +1
Query: 352 ADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKT 531
A L+ H W P+G ++G+ + +W + LS +
Sbjct: 311 ATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWD--IRNLSKSVA-------------V 355
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ 711
LRG++ + I ++ DG +A + + V+D+ T D G + G+ + P +
Sbjct: 356 LRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSPDTE 415
Query: 712 YITSTSTDRVF 744
+ DR +
Sbjct: 416 ALFIGVWDRTY 426
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 41.1 bits (92), Expect = 8e-04
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Frame = +1
Query: 250 PNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPN-GQLLASG 426
P+ S G DS +++W T + ++ +E A D H V W+P+ L+ +G
Sbjct: 291 PSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLH-----CVDWNPHDNNLILTG 345
Query: 427 DDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSV 606
++ + ++ ++ L+ G YK GH VL + WS D S + S
Sbjct: 346 SADNTVRVFDRR--NLTSNGVGSPVYK--------FEGHRAAVLCVQWSPDKSSVFGSSA 395
Query: 607 DNKLI-VWDIHR 639
++ L+ +WD R
Sbjct: 396 EDGLLNIWDCDR 407
Score = 31.1 bits (67), Expect = 0.86
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = +1
Query: 250 PNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPN-GQLLASG 426
P+D + +G D+ V ++ + V V H+ AV V+WSP+ + S
Sbjct: 336 PHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYK-FEGHRAAVLCVQWSPDKSSVFGSS 394
Query: 427 DDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSM 576
++ ++ IW + E K ++ GH + V+D WS+
Sbjct: 395 AEDGLLNIWDCD----RVGKKSERATKTPDGLFFQHAGHRDKVVDFHWSL 440
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCW-DPKGQY 714
G+ + + +S DG ++ +GS D+ + V+D+ R + H V VC+ D G
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 715 ITSTSTDRVFRAFD 756
I S S D + + +D
Sbjct: 287 ILSGSDDNLCKVWD 300
Score = 33.5 bits (73), Expect = 0.16
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Frame = +1
Query: 256 DPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSP-NGQLLASGDD 432
D + +G +D + ++ L E V L A H VN V ++ +G L+ SG D
Sbjct: 240 DGREVVAGSSDDSIYVYDL---EANRVSLRTVA----HTSDVNTVCFADESGNLILSGSD 292
Query: 433 ESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDN 612
+++ +W ++ G + K V L GH+E V I DG S D
Sbjct: 293 DNLCKVWDRR------CFIGRD--KPAGV----LVGHLEGVTFIDSRGDGRYFISNGKDQ 340
Query: 613 KLIVWDIHR 639
+ +WDI +
Sbjct: 341 TIKLWDIRK 349
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ 711
+R V+ S+S DG LAS D K+ +W++ + + +H + V + P
Sbjct: 504 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 563
Query: 712 YITSTSTDRVFRAFDVS 762
+ ++S D+ + +D S
Sbjct: 564 QLATSSFDKTIKIWDAS 580
Score = 38.3 bits (85), Expect = 0.006
Identities = 39/176 (22%), Positives = 66/176 (37%), Gaps = 18/176 (10%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSV---HLEVAADL-----------TRHQKAVNVVRWSPN 405
LAS G D V IW + T + S H + D+ + K + + S
Sbjct: 523 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDP 582
Query: 406 GQLLA--SGDDESIIFI-WKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSM 576
G L SG ++ I + K EL + + + + +R + +
Sbjct: 583 GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQVRFQP 642
Query: 577 DGSQLASGSVDNKLIVWDI-HRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV 741
Q + + +N + ++DI + + I H V VCW P G+ + S S D V
Sbjct: 643 RTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV 698
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +1
Query: 394 WSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS 573
+S +G+LLAS + +FIW ET V T H + D+ +
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNM----------------ETLQVESTPEEHAHIITDVRFR 559
Query: 574 MDGSQLASGSVDNKLIVWDIHRARY-TTILSDHKGFVQGVCWDP-KGQYITSTSTDRVFR 747
+ +QLA+ S D + +WD Y +S H V + + P K + + S ++ R
Sbjct: 560 PNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIR 619
Query: 748 AFDVS 762
+D++
Sbjct: 620 FWDIN 624
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ 711
+R V+ S+S DG LAS D K+ +W++ + + +H + V + P
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Query: 712 YITSTSTDRVFRAFDVS 762
+ ++S D+ + +D S
Sbjct: 566 QLATSSFDKTIKIWDAS 582
Score = 38.3 bits (85), Expect = 0.006
Identities = 39/176 (22%), Positives = 66/176 (37%), Gaps = 18/176 (10%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSV---HLEVAADL-----------TRHQKAVNVVRWSPN 405
LAS G D V IW + T + S H + D+ + K + + S
Sbjct: 525 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDP 584
Query: 406 GQLLA--SGDDESIIFI-WKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSM 576
G L SG ++ I + K EL + + + + +R + +
Sbjct: 585 GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQVRFQP 644
Query: 577 DGSQLASGSVDNKLIVWDI-HRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV 741
Q + + +N + ++DI + + I H V VCW P G+ + S S D V
Sbjct: 645 RTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV 700
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +1
Query: 394 WSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS 573
+S +G+LLAS + +FIW ET V T H + D+ +
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNM----------------ETLQVESTPEEHAHIITDVRFR 561
Query: 574 MDGSQLASGSVDNKLIVWDIHRARY-TTILSDHKGFVQGVCWDP-KGQYITSTSTDRVFR 747
+ +QLA+ S D + +WD Y +S H V + + P K + + S ++ R
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIR 621
Query: 748 AFDVS 762
+D++
Sbjct: 622 FWDIN 626
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ 711
+R V+ S+S DG LAS D K+ +W++ + + +H + V + P
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Query: 712 YITSTSTDRVFRAFDVS 762
+ ++S D+ + +D S
Sbjct: 566 QLATSSFDKTIKIWDAS 582
Score = 38.3 bits (85), Expect = 0.006
Identities = 39/176 (22%), Positives = 66/176 (37%), Gaps = 18/176 (10%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSV---HLEVAADL-----------TRHQKAVNVVRWSPN 405
LAS G D V IW + T + S H + D+ + K + + S
Sbjct: 525 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDP 584
Query: 406 GQLLA--SGDDESIIFI-WKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSM 576
G L SG ++ I + K EL + + + + +R + +
Sbjct: 585 GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQVRFQP 644
Query: 577 DGSQLASGSVDNKLIVWDI-HRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV 741
Q + + +N + ++DI + + I H V VCW P G+ + S S D V
Sbjct: 645 RTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV 700
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +1
Query: 394 WSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS 573
+S +G+LLAS + +FIW ET V T H + D+ +
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNM----------------ETLQVESTPEEHAHIITDVRFR 561
Query: 574 MDGSQLASGSVDNKLIVWDIHRARY-TTILSDHKGFVQGVCWDP-KGQYITSTSTDRVFR 747
+ +QLA+ S D + +WD Y +S H V + + P K + + S ++ R
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIR 621
Query: 748 AFDVS 762
+D++
Sbjct: 622 FWDIN 626
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ 711
+R V+ S+S DG LAS D K+ +W++ + + +H + V + P
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Query: 712 YITSTSTDRVFRAFDVS 762
+ ++S D+ + +D S
Sbjct: 566 QLATSSFDKTIKIWDAS 582
Score = 38.3 bits (85), Expect = 0.006
Identities = 39/176 (22%), Positives = 66/176 (37%), Gaps = 18/176 (10%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSV---HLEVAADL-----------TRHQKAVNVVRWSPN 405
LAS G D V IW + T + S H + D+ + K + + S
Sbjct: 525 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDP 584
Query: 406 GQLLA--SGDDESIIFI-WKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSM 576
G L SG ++ I + K EL + + + + +R + +
Sbjct: 585 GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQVRFQP 644
Query: 577 DGSQLASGSVDNKLIVWDI-HRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV 741
Q + + +N + ++DI + + I H V VCW P G+ + S S D V
Sbjct: 645 RTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV 700
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +1
Query: 394 WSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS 573
+S +G+LLAS + +FIW ET V T H + D+ +
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNM----------------ETLQVESTPEEHAHIITDVRFR 561
Query: 574 MDGSQLASGSVDNKLIVWDIHRARY-TTILSDHKGFVQGVCWDP-KGQYITSTSTDRVFR 747
+ +QLA+ S D + +WD Y +S H V + + P K + + S ++ R
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIR 621
Query: 748 AFDVS 762
+D++
Sbjct: 622 FWDIN 626
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ 711
+R V+ S+S DG LAS D K+ +W++ + + +H + V + P
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Query: 712 YITSTSTDRVFRAFDVS 762
+ ++S D+ + +D S
Sbjct: 566 QLATSSFDKTIKIWDAS 582
Score = 38.3 bits (85), Expect = 0.006
Identities = 39/176 (22%), Positives = 66/176 (37%), Gaps = 18/176 (10%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSV---HLEVAADL-----------TRHQKAVNVVRWSPN 405
LAS G D V IW + T + S H + D+ + K + + S
Sbjct: 525 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDP 584
Query: 406 GQLLA--SGDDESIIFI-WKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSM 576
G L SG ++ I + K EL + + + + +R + +
Sbjct: 585 GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQVRFQP 644
Query: 577 DGSQLASGSVDNKLIVWDI-HRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV 741
Q + + +N + ++DI + + I H V VCW P G+ + S S D V
Sbjct: 645 RTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV 700
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = +1
Query: 394 WSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS 573
+S +G+LLAS + +FIW ET V T H + D+ +
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNM----------------ETLQVESTPEEHAHIITDVRFR 561
Query: 574 MDGSQLASGSVDNKLIVWDIHRARY-TTILSDHKGFVQGVCWDP-KGQYITSTSTDRVFR 747
+ +QLA+ S D + +WD Y +S H V + + P K + + S ++ R
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIR 621
Query: 748 AFDVS 762
+D++
Sbjct: 622 FWDIN 626
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/118 (26%), Positives = 50/118 (42%)
Frame = +1
Query: 274 SGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW 453
+G D + +W TG + A L +H+ AVN + + +G +L SG + I +W
Sbjct: 251 TGSADRRIRVW---AKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVW 307
Query: 454 KQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
++ E V LRGH + +L + D L SGS D + +W
Sbjct: 308 ER------------EDTSNYMAVRGALRGHDKAILSLFNVSD--LLLSGSADRTVRIW 351
Score = 35.5 bits (78), Expect = 0.040
Identities = 27/97 (27%), Positives = 42/97 (43%)
Frame = +1
Query: 340 LEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWV 519
L + H AVN + S NG + D I +W + GE+++
Sbjct: 225 LRCKESIKAHDDAVNAIAVSTNGTVYTGSADRRIR-VWAKPT--------GEKRH----T 271
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWD 630
+ TL H V ++ + DGS L SGS D ++VW+
Sbjct: 272 LVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWE 308
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA------RYTTILSDHKGFVQGV 690
T GH E+V + WS G +LASG DN + +WD A ++ +H V+ +
Sbjct: 231 TYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRAL 290
Query: 691 CWDP 702
W P
Sbjct: 291 AWCP 294
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H + V ++WS +G+ LASG +++++ IW + L +P + +++E H
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEE----------HT 284
Query: 547 EDVLDISW-SMDGSQLASGS--VDNKLIVWDIH 636
V ++W S LA+G D K+ W+ H
Sbjct: 285 AAVRALAWCPFQASLLATGGGVGDGKINFWNTH 317
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWDIHRARYT-TILSDHKGFVQGVCWD 699
V I+W+ DG LA G ++++ VWD R+ T+ H+ V + W+
Sbjct: 155 VTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWN 204
Score = 32.7 bits (71), Expect = 0.28
Identities = 41/153 (26%), Positives = 57/153 (37%), Gaps = 30/153 (19%)
Frame = +1
Query: 265 RLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSP-NGQLLASG---DD 432
+LASGG D+ V IW S + + H AV + W P LLA+G D
Sbjct: 250 KLASGGNDNVVHIWDRSLASSNPTR-QWLHRFEEHTAAVRALAWCPFQASLLATGGGVGD 308
Query: 433 ESIIF---------------------IWKQKLEELSPATEGEEQYKETW-----VVYKTL 534
I F +W + EL A + W V L
Sbjct: 309 GKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAEL 368
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
GH VL ++ S DG +AS + D L +W++
Sbjct: 369 NGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +1
Query: 511 TWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGV 690
T+ ++R V +S DG LAS D K ++W + T L +H + +
Sbjct: 640 TFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDI 699
Query: 691 CWDPKGQYITSTSTDRVFRAFD 756
+ P + ++S D+ R +D
Sbjct: 700 RFSPSQLRLATSSFDKTVRVWD 721
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 580 GSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV 741
G LA+ S N + V D+ L H + VCWDP G ++ S S D V
Sbjct: 789 GKYLAASSA-NLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSEDMV 841
Score = 36.7 bits (81), Expect = 0.017
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 2/176 (1%)
Frame = +1
Query: 253 NDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDD 432
+D LAS G D ++WY T ++ L H + +R+SP+ LA+
Sbjct: 661 SDGKMLASAGHDKKAVLWYTDT-------MKPKTTLEEHTAMITDIRFSPSQLRLATSSF 713
Query: 433 ESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISW-SMDGSQLASGSVD 609
+ + +W + S +T GH V + + + + S D
Sbjct: 714 DKTVRVWDADNKGYS---------------LRTFMGHSSMVTSLDFHPIKDDLICSCDND 758
Query: 610 NKLIVWDIHRARYTTILSDHKGFVQGVCWDPK-GQYITSTSTDRVFRAFDVSTXKV 774
N++ W I+ T + +KG + + P+ G+Y+ ++S + V DV T +
Sbjct: 759 NEIRYWSINNGSCTRV---YKGGSTQIRFQPRVGKYLAASSANLV-NVLDVETQAI 810
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
ET + +L+GH + + W G LAS S D + VW +
Sbjct: 806 ETQAIRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVWTL 846
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Frame = +1
Query: 361 TRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATE-GEEQYKETWVVYKTLR 537
TRH K + S +G+ LA+G + + +W + E + Q K++ V+
Sbjct: 203 TRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDS--VHCAFT 260
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG-QY 714
GH V + + ++L SGS D L +W+ Y H+ + + D G +
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSI--DALGRER 318
Query: 715 ITSTSTDRVFRAFDV 759
+ S DR + + V
Sbjct: 319 VLSVGRDRTMQLYKV 333
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 196 SWHNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTE 324
SW+ R S+ A +D LA+GG D HV +W + T E
Sbjct: 200 SWYTRHNKQSLAL---AVSSDGRYLATGGVDCHVHLWDIRTRE 239
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA------RYTTILSDHKGFV 681
+ +T GH E+V + WS G++ ASG DN + +WD A ++ +H V
Sbjct: 244 IVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAV 303
Query: 682 QGVCWDP 702
+ + W P
Sbjct: 304 RALAWCP 310
Score = 34.3 bits (75), Expect = 0.092
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWD-IHRARYTTILSDHKGFVQGVCWD 699
V I+W+ DG LA G ++++ +WD + + T+ H+ V + WD
Sbjct: 171 VTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWD 220
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H + V ++WS +G ASG +++++ IW + L + +++E H
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEE----------HT 300
Query: 547 EDVLDISW-SMDGSQLASGS--VDNKLIVWDIH 636
V ++W S LA+G D K+ W+ H
Sbjct: 301 AAVRALAWCPFQASLLATGGGVGDGKIKFWNTH 333
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +1
Query: 376 AVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDV 555
AVN V+W+ ++AS ++ I +W++ + L V K E+
Sbjct: 45 AVNSVKWNHTNLVVASTGEDKKISLWRKNGQSLGTVP----------VTGKDGGDSAEEC 94
Query: 556 LD-ISWSMDGSQ-LASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTS 729
L IS+S GS+ + SG + +WD+ R L H + GV ++ K +++ S S
Sbjct: 95 LSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
Score = 33.1 bits (72), Expect = 0.21
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 1/141 (0%)
Frame = +1
Query: 262 LRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNG-QLLASGDDES 438
L +AS G D + +W + G+V + ++ ++ + +S G + + SG
Sbjct: 56 LVVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQ 115
Query: 439 IIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKL 618
I+ IW + Q K + K L+GH + + ++ LAS SV L
Sbjct: 116 IVKIW-------------DLQRK---LCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDL 159
Query: 619 IVWDIHRARYTTILSDHKGFV 681
IV ++ T L D G V
Sbjct: 160 IVHNLASGARATELKDPNGQV 180
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 8/150 (5%)
Frame = +1
Query: 340 LEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWV 519
L + ++ HQ + +++SP+ LLAS ++ I +W+ + E+ EG +
Sbjct: 401 LHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMSMNEGSLTPIHPSM 460
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSD--------HKG 675
T + D ++S S S I +H LSD H
Sbjct: 461 SGSTDKSSEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSDKPICSFTGHLD 520
Query: 676 FVQGVCWDPKGQYITSTSTDRVFRAFDVST 765
V + W + Q + S+S D+ R +D+ T
Sbjct: 521 DVLDLSWS-RSQLLLSSSMDKTVRLWDIET 549
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 574 MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ 711
+D SGS+D K+ +W+I R +D K V VC+ P GQ
Sbjct: 570 LDEDYFISGSLDAKIRIWNISN-RQVVEWNDLKEMVTAVCYTPDGQ 614
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 541 HMEDVLDISWSMDGSQ-LASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWD 699
H E VL ++W+ + LAS S D K+ VWD+ + H VQ V W+
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 317
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Frame = +1
Query: 406 GQLLASGDDES-IIFIWK-QKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMD 579
G LA G D + I IW ++ P + Q KE YK H VL ++W+ +
Sbjct: 188 GNFLAVGSDGTPTIEIWDLDAWFDMLPCVQLGGQNKEG--NYKQ-GSHTRSVLGLAWNKE 244
Query: 580 GSQ-LASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWD 699
LAS S D K+ VWD+ + H VQ V W+
Sbjct: 245 FRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 285
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +1
Query: 370 QKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHME 549
+K +N W P Q + SG ++ +I IW + +L ++ E GH +
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEV-------------GHKK 194
Query: 550 DVLDISWSMDGSQLASGSVDNKLIVWDIHR----ARYTTIL 660
D+ + + D S +GS+D +WD+ YTT++
Sbjct: 195 DITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVV 235
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
T RGH V S D S+L +GS D +WD+
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDV 81
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 664 DHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
D K + W P Q I S D+V R +D T K++
Sbjct: 146 DGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLL 183
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +1
Query: 370 QKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHME 549
+K +N W P Q + SG ++ +I IW + +L ++ E GH +
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEV-------------GHKK 194
Query: 550 DVLDISWSMDGSQLASGSVDNKLIVWDIHR----ARYTTIL 660
D+ + + D S +GS+D +WD+ YTT++
Sbjct: 195 DITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVV 235
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
T RGH V S D S+L +GS D +WD+
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDV 81
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 664 DHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
D K + W P Q I S D+V R +D T K++
Sbjct: 146 DGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLL 183
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +1
Query: 370 QKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHME 549
+K +N W P Q + SG ++ +I IW + +L ++ E GH +
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEV-------------GHKK 194
Query: 550 DVLDISWSMDGSQLASGSVDNKLIVWDIHR----ARYTTIL 660
D+ + + D S +GS+D +WD+ YTT++
Sbjct: 195 DITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVV 235
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
T RGH V S D S+L +GS D +WD+
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDV 81
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 664 DHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
D K + W P Q I S D+V R +D T K++
Sbjct: 146 DGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLL 183
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +1
Query: 403 NGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDG 582
NG L A G I +WK AT+ E + + +L GH + + + G
Sbjct: 276 NGMLFA-GTSSGSILVWK--------ATDSES---DPFKYLTSLEGHHSGEVTC-FVVGG 322
Query: 583 SQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQG-VCWD 699
L SGSVD + VWD++ + L H G V +CWD
Sbjct: 323 EVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWD 362
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWD 630
L GH D+ I+ +L S S D L++WD
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWD 215
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 39.1 bits (87), Expect = 0.003
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 8/143 (5%)
Frame = +1
Query: 205 NRDPVLSVDFQP--------KAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADL 360
+ D V SV++QP + + PL + S D ++IW V++ +L
Sbjct: 303 HEDWVYSVEWQPPVIDFIDGRLVNHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGEL 362
Query: 361 TRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRG 540
+ WSPN + + +W+ +S + E E W + K G
Sbjct: 363 SHCALGFYGGHWSPNSLSILAHGYGGAFHLWRN----VSSSKESEN-----WQMQKVPSG 413
Query: 541 HMEDVLDISWSMDGSQLASGSVD 609
H V D++W+ G L S S D
Sbjct: 414 HFAAVTDVTWARTGEYLLSVSQD 436
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +1
Query: 256 DPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDE 435
D L S D H ++ + T+ G V ++ A + H++ + W+P G A+ +
Sbjct: 658 DDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRD 717
Query: 436 SIIFIW 453
+ IW
Sbjct: 718 KTVKIW 723
Score = 33.1 bits (72), Expect = 0.21
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 3/151 (1%)
Frame = +1
Query: 232 FQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVV---RWSP 402
F KA+ D L SG +D +++W LST V H+K V + S
Sbjct: 73 FAFKAKKLDRQYLLSGDSDGIIILWELSTLNNDQQWRHVLQLPLSHKKGVTCITAYMVSE 132
Query: 403 NGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDG 582
+ AS + ++ +W P+ E + ++ + T + ++ +
Sbjct: 133 TDAMFASASSDGVVNVWDVSFPS-QPSEECKVVCLDS-ICVDTKAIVTLSLAELPQNPGR 190
Query: 583 SQLASGSVDNKLIVWDIHRARYTTILSDHKG 675
LA G +DNK+ ++ R T + + KG
Sbjct: 191 FALALGGLDNKIKLYSGERTGKFTSVCELKG 221
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 39.1 bits (87), Expect = 0.003
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 5/172 (2%)
Frame = +1
Query: 274 SGGTDSHVLIWYLSTT--ETGSVHLEVAADLTRHQKAVNVVRWSPNGQL--LASGDDESI 441
S G IW + + S LE A L H +N V W P+G+ L S D+++
Sbjct: 86 STGESFGAAIWQIPELYGQLNSPQLERVASLDAHVGKINCVLWWPSGRCDKLISIDEQN- 144
Query: 442 IFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLI 621
IF+W + K V+ K G + + +W + + ++ +
Sbjct: 145 IFLWSLDCSK-----------KSAEVLSKDSAGMLHSLSGGAWDPHDVNAVAATGESSVQ 193
Query: 622 VWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV-FRAFDVSTXKV 774
WD+ + + S V+GV ++PK ++I T+ D +D+ KV
Sbjct: 194 FWDLRTMK--KVNSIEHAHVRGVDYNPKREHILVTAEDESGIHVWDLRKAKV 243
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQ 372
+ S GTDS V +WY S T + E + TR +
Sbjct: 268 ILSAGTDSVVNLWYASATSSDDKTSESPVESTRQR 302
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +1
Query: 532 LRGHMEDVLDISWS-MDGSQLASGSVDNKLIVWDIHRARYTT------ILSDHKGFVQGV 690
LRGH + +SWS L SGS D ++ +WDI+ I H+G V+ V
Sbjct: 174 LRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDV 233
Query: 691 CWDPKGQYITSTSTD 735
W + +Y+ + D
Sbjct: 234 AWHLRHEYLFGSVGD 248
Score = 35.5 bits (78), Expect = 0.040
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +1
Query: 274 SGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSP-NGQLLASGDDESIIFI 450
S G D ++LIW L + V A H VN + ++P N ++A+G + + +
Sbjct: 245 SVGDDQYLLIWDLRSPSASKPVQSVVA----HSMEVNCLAFNPFNEWVVATGSTDKTVKL 300
Query: 451 WKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQ-LASGSVDNKLIVW 627
+ L +LS A T H E+V + W+ LAS + +L+VW
Sbjct: 301 FD--LRKLSTALH-------------TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
Query: 628 DIHR 639
D+ R
Sbjct: 346 DLSR 349
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 38.7 bits (86), Expect = 0.004
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H A+N V S NG + D+ I +W++ + E +++ K + V +
Sbjct: 207 HDDAINAVALSENGDIYTGSSDQR-IKVWRKNINE----ENVKKKRKHSLVAILSEHNSG 261
Query: 547 EDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGV-CWDPKGQYITS 723
+ L +S +GS L SG D ++VW+ ++ +G + V C + S
Sbjct: 262 INALALS-GTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDILCS 320
Query: 724 TSTDRVFRAFDVS 762
S D+ R + S
Sbjct: 321 GSADKTVRLWKCS 333
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Frame = +1
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
L H+ AV +G+ + +G D+ ++ +W +T + R
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSM----------------DTAYCLASCR 284
Query: 538 GHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK--GQ 711
GH D+ D++ S + +AS S D + VW + ++L H G V + + P+
Sbjct: 285 GHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSP 344
Query: 712 Y-ITSTSTDRVFRAFD 756
Y + S+S D R +D
Sbjct: 345 YQLLSSSDDGTCRIWD 360
Score = 34.3 bits (75), Expect = 0.092
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK 705
K LRGH V G + +GS D + VW + A H+G + +
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298
Query: 706 GQYITSTSTDRVFRAF 753
+I S S D V R +
Sbjct: 299 NIFIASASNDCVIRVW 314
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVC-- 693
V K L GH +DV D +S + +AS S+D + VW++ R ++ G C
Sbjct: 208 VLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVI---YGISPQYCIR 264
Query: 694 WDP-KGQYITSTSTDRVFRAFDVSTXKVV 777
+ P ++++ + ++ F+ ST +++
Sbjct: 265 FHPVNNNFLSAGNANKELTVFNFSTGRII 293
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
+ +G DS+V + L+ + V+ L H+ V V W+ LLAS D ++
Sbjct: 419 IVAGSEDSNVYFYDLTKPKHTCVN-----KLQGHRFPVMCVAWNHGENLLASSDFYGVVI 473
Query: 448 IWKQ 459
+WK+
Sbjct: 474 VWKR 477
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 355 DLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEEL 474
+L HQ VN + W+ NG LL SG D+ I IW +L
Sbjct: 45 ELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKL 84
Score = 31.5 bits (68), Expect = 0.65
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWD 630
L GH V ++W+ +GS L SGS D ++ +W+
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWN 78
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQG-VCWDPK 705
+L GH V +S + ++L SG++DN + VW + + L++H V +CWD
Sbjct: 262 SLLGHTLAV--VSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWD-- 317
Query: 706 GQYITSTSTDRVFR 747
Q++ S S D +
Sbjct: 318 -QFLLSCSLDNTVK 330
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 38.3 bits (85), Expect = 0.006
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Frame = +1
Query: 301 IWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSP 480
+W L+T T ++ +A++ T AVN V WSP+G LL + I+ I+
Sbjct: 400 VWDLATC-TVNLQASLASEYTA---AVNRVVWSPDGGLLGVAYSKHIVHIY--------- 446
Query: 481 ATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQL--ASGSVDNKLIVWDIHRARYTT 654
+ G E + + + H +V D+++S QL + D + VWD
Sbjct: 447 SYHGGEDLRN----HLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLH 502
Query: 655 ILSDHKGFVQGVCWDPKG--QYITSTSTDRVFRAF 753
H+ V VC K Q+I ST+ D +A+
Sbjct: 503 TFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 38.3 bits (85), Expect = 0.006
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Frame = +1
Query: 301 IWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSP 480
+W L+T T ++ +A++ T AVN V WSP+G LL + I+ I+
Sbjct: 400 VWDLATC-TVNLQASLASEYTA---AVNRVVWSPDGGLLGVAYSKHIVHIY--------- 446
Query: 481 ATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQL--ASGSVDNKLIVWDIHRARYTT 654
+ G E + + + H +V D+++S QL + D + VWD
Sbjct: 447 SYHGGEDLRN----HLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLH 502
Query: 655 ILSDHKGFVQGVCWDPKG--QYITSTSTDRVFRAF 753
H+ V VC K Q+I ST+ D +A+
Sbjct: 503 TFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +1
Query: 541 HMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYIT 720
H + VL +W DG+ + SG D + +W + ++ H+G + + W P +
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLA 130
Query: 721 STSTDRVFRAFD 756
+ S D+ + +D
Sbjct: 131 TGSWDKTLKYWD 142
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQG-VCWDPK 705
+L GH V+ + + ++L SGS+D + VW + + L+DH V +CWD
Sbjct: 269 SLTGHTLAVVTLY--VGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWD-- 324
Query: 706 GQYITSTSTDRVFR 747
Q++ S S D +
Sbjct: 325 -QFLLSCSLDNTVK 337
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTIL 660
E++ + L GH + V I+ +L +GS D L VWD + T +L
Sbjct: 139 ESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVL 189
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 277 GGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWK 456
GG S S +E + LE+ L +H+ VN V ++ G +L SG D+ + +W
Sbjct: 28 GGISSRNFSNRFSASENLVLRLEIYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWD 87
Query: 457 QKL 465
+L
Sbjct: 88 WQL 90
Score = 35.5 bits (78), Expect = 0.040
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGV 690
+YK L H V +S++ +G L SGS D ++++WD LS H G V
Sbjct: 51 IYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVK--LSFHSGHANNV 105
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/82 (30%), Positives = 35/82 (42%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIF 447
+ SG + IW + G + + AD RH VN + P+ +LAS ES I
Sbjct: 349 VVSGSDCGRIFIW---RKKGGELIRVMEAD--RH--VVNCIEPHPHIPVLASSGIESDIK 401
Query: 448 IWKQKLEELSPATEGEEQYKET 513
+W K E + E E K T
Sbjct: 402 VWTSKAAERATLPENIELRKRT 423
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 37.9 bits (84), Expect = 0.007
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 370 QKAVNVVRWSPN--GQLLASGDDES--IIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
++ +V++W+PN Q++ + DD+S + +W + +SP E
Sbjct: 216 RRRCSVLQWNPNVTTQIMVASDDDSSPTLKLWDMR-NIMSPVRE--------------FT 260
Query: 538 GHMEDVLDISWS-MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQY 714
GH V+ + W D S L + + DN+ I WD + A L + V W PK
Sbjct: 261 GHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYPKIPG 320
Query: 715 ITSTST 732
+ S S+
Sbjct: 321 VISASS 326
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 37.9 bits (84), Expect = 0.007
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 370 QKAVNVVRWSPN--GQLLASGDDES--IIFIWKQKLEELSPATEGEEQYKETWVVYKTLR 537
++ +V++W+PN Q++ + DD+S + +W + +SP E
Sbjct: 216 RRRCSVLQWNPNVTTQIMVASDDDSSPTLKLWDMR-NIMSPVRE--------------FT 260
Query: 538 GHMEDVLDISWS-MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQY 714
GH V+ + W D S L + + DN+ I WD + A L + V W PK
Sbjct: 261 GHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYPKIPG 320
Query: 715 ITSTST 732
+ S S+
Sbjct: 321 VISASS 326
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 37.9 bits (84), Expect = 0.007
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +1
Query: 250 PNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQ-LLASG 426
P S G DS +++W T +E A D H V W+P+ L+ +G
Sbjct: 302 PTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLH-----CVDWNPHDDNLILTG 356
Query: 427 DDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSV 606
++ + ++ ++ +L+ G YK GH VL + WS D S + S
Sbjct: 357 SADNTVRLFDRR--KLTANGVGSPIYK--------FEGHKAAVLCVQWSPDKSSVFGSSA 406
Query: 607 DNKLI-VWDIHR 639
++ L+ +WD R
Sbjct: 407 EDGLLNIWDYDR 418
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 37.9 bits (84), Expect = 0.007
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTTETGSV-HLEVAADLTRHQKAVNVVRW---SPNGQLLASGDDE 435
+A G D ++ +W ++E+G + H+ DL++H+ V + + SPN LASG D+
Sbjct: 83 IAGGLVDGNIGLWNPISSESGEIAHVR---DLSKHKGPVRGLEFNVKSPNQ--LASGADD 137
Query: 436 SIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQ-LASGSVDN 612
+ IW +L+ ++ K T ++ ++ +SW+ LAS S +
Sbjct: 138 GTVCIW-----DLANPSKPSHYLKGTGSYMQS------EISSLSWNKGFQHVLASTSHNG 186
Query: 613 KLIVWDIHRARYTTILSDHKGFVQ--GVCWDP 702
++WD++ + I++D K V+ + WDP
Sbjct: 187 TTVIWDVNNEK---IITDLKTTVRCSVLQWDP 215
Score = 33.5 bits (73), Expect = 0.16
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +1
Query: 184 IPEISWHNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLT 363
+ ++S H + PV ++F K+ P +LASG D V IW L+ S +L+
Sbjct: 108 VRDLSKH-KGPVRGLEFNVKS----PNQLASGADDGTVCIWDLANPSKPSHYLKGTGSYM 162
Query: 364 RHQKAVNVVRWSPNGQ-LLASGDDESIIFIWKQKLEEL 474
Q ++ + W+ Q +LAS IW E++
Sbjct: 163 --QSEISSLSWNKGFQHVLASTSHNGTTVIWDVNNEKI 198
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWS-MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP 702
+T GH V+ + W D L + DN+ I W+ + L + + V W P
Sbjct: 246 RTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYP 305
Query: 703 KGQYITSTST 732
K + S S+
Sbjct: 306 KMPGVISASS 315
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHR-ARYTTILSDHKGFVQGVCWDPK 705
TL+GH++ +W +G A+G+ D +WD + + +L + G V+ + +
Sbjct: 314 TLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSD 373
Query: 706 GQYITSTSTDRVFRAFDVST 765
G+Y+ +D +
Sbjct: 374 GRYVAMAEPADFVHIYDTKS 393
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHR-ARYTTILSDHKGFVQGVCWDPK 705
TL+GH++ +W +G A+G+ D +WD + + +L + G V+ + +
Sbjct: 308 TLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSD 367
Query: 706 GQYITSTSTDRVFRAFDVST 765
G+Y+ +D +
Sbjct: 368 GRYVAMAEPADFVHIYDTKS 387
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA 642
T GH E+V + WS G +LASG N + +WD HR+
Sbjct: 244 TYLGHTEEVCGLKWSESGKKLASGGNYNVVHIWD-HRS 280
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWD-IHRARYTTILSDHKGFVQGVCWD 699
V I+W+ DG LA G ++++ +WD + + T++ H+ V + W+
Sbjct: 168 VTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLIGGHESRVGSLAWN 217
Score = 31.9 bits (69), Expect = 0.49
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H + V ++WS +G+ LASG + +++ IW + S T W+ H
Sbjct: 248 HTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPT-------RQWL--HRFEEHT 298
Query: 547 EDVLDISW-SMDGSQLASGS--VDNKLIVWDIH 636
V ++W + LA+G D K+ W+ H
Sbjct: 299 AAVRALAWCPFQATLLATGGGVGDGKIKFWNTH 331
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = +1
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKT------LRGHMEDVLDISWSMDGSQLASGSVD 609
+W Q+ EL ++ G Q + T Y + L GH VL ++ S +G +AS + D
Sbjct: 349 LWSQRERELL-SSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGD 407
Query: 610 NKLIVWDI 633
L +W++
Sbjct: 408 ENLRLWNV 415
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI--HRA 642
LRGH V+D+S+ S L +GS D +L +WD HRA
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRA 51
Score = 31.5 bits (68), Expect = 0.65
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 352 ADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWK 456
A L H+ N V +SP+ +L+AS +++ + +WK
Sbjct: 344 AILKYHRATCNAVSYSPDCELMASASEDATVALWK 378
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQL-ASGSVDNKLIVWDI--HRARYTTILSDHKGFVQGVCWD 699
+L GH + V I WS L AS +D + VW++ + + H V+ V W
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWS 214
Query: 700 PKGQYITSTSTDRVFRAFDV 759
+G + S D R FDV
Sbjct: 215 KQGLSLLSCGYDCTSRLFDV 234
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Frame = +1
Query: 346 VAADLTRHQKAVNVVRWSPNG-QLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVV 522
++ LT H KAV + WS + LLAS + +++W ++ K
Sbjct: 152 MSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWN---------VWSNDKKK----- 197
Query: 523 YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHR 639
+ H V D+ WS G L S D ++D+ R
Sbjct: 198 VRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVER 236
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 511 TWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRAR 645
T + + RGH + + D+ +S DG + S S+D L +WD+ A+
Sbjct: 546 TLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW-DIHRARYTT--ILSDHKGFVQGV 690
+ TL GH + V + + D + + S D + +W + Y L+DH V+ V
Sbjct: 256 ILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAV 315
Query: 691 CWDPKGQYITSTSTDRVFRAFDVST 765
P +Y S S D + +D+S+
Sbjct: 316 TVHPTNKYFVSASLDGTWCFYDLSS 340
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +1
Query: 577 DGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFD 756
DG L +G+ + + +WD+ H G V + + G ++ + + D V R +D
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV-RLWD 422
Query: 757 V 759
+
Sbjct: 423 L 423
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW-DIHRARYTT--ILSDHKGFVQGV 690
+ TL GH + V + + D + + S D + +W + Y L+DH V+ V
Sbjct: 256 ILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAV 315
Query: 691 CWDPKGQYITSTSTDRVFRAFDVST 765
P +Y S S D + +D+S+
Sbjct: 316 TVHPTNKYFVSASLDGTWCFYDLSS 340
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +1
Query: 577 DGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFD 756
DG L +G+ + + +WD+ H G V + + G ++ + + D V R +D
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV-RLWD 422
Query: 757 V 759
+
Sbjct: 423 L 423
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWD 699
+L SWSMDG + +G D+ + VW + + H +V GV +D
Sbjct: 348 LLCCSWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 396
Score = 31.5 bits (68), Expect = 0.65
Identities = 44/217 (20%), Positives = 81/217 (37%), Gaps = 16/217 (7%)
Frame = +1
Query: 175 KFAIPEISWHNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVL-----IWYLSTTETGSVH 339
K + I + N +P+ F P A+ L + D + + + +S G++H
Sbjct: 167 KDPVKSIHFSNSNPMCHA-FDPDAKDGHDLLIGLNSGDVYTVSLRQQLQDVSKKLVGALH 225
Query: 340 LEVAADLTRHQKAVNVVRWSPNGQ--LLASGDDESIIFIWKQK---LEELSPATEGEEQY 504
D + + + W P G + + D ++ K K E PA Q+
Sbjct: 226 YN--KDGSVNNSRCTSISWVPGGDGAFVVAHADGNLYVYEKNKDGATESTFPAIRDPTQF 283
Query: 505 KETWVVYK----TLRGHM--EDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSD 666
Y R H+ + I++S DG+ LA+ D L ++D +
Sbjct: 284 SVDKAKYSKSNPVARWHICQGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKS 343
Query: 667 HKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
+ G + W G+YI + D + + + + KVV
Sbjct: 344 YYGALLCCSWSMDGKYILTGGEDDLVQVWSMEDRKVV 380
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 36.7 bits (81), Expect = 0.017
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 175 KFAIPEISWHNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWY--LSTTETGSVHLEV 348
+ A+PE DPV ++ + P P + + T + IW+ L+ G + ++
Sbjct: 218 ELALPE---DKGDPVYALSWAPNI--GRPYEVVAVATHKGIGIWHVGLAPDLEGRLPVKK 272
Query: 349 AADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKL 465
+ L+ HQ V + W +G LAS + ++ +W+ L
Sbjct: 273 VSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNL 311
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 472 LSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW 627
L+P EG K+ +L GH +V + W M G LAS D + +W
Sbjct: 260 LAPDLEGRLPVKKV----SSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHR-ARYTT--ILSDHKGFVQGV 690
+ TL GH + V I + D + + S D + +W YT+ L DH V+ V
Sbjct: 256 ILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAV 315
Query: 691 CWDPKGQYITSTSTDRVFRAFDVST 765
+Y S S D + +D+S+
Sbjct: 316 TVHATNKYFVSASLDSTWCFYDLSS 340
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/65 (21%), Positives = 29/65 (44%)
Frame = +1
Query: 577 DGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFD 756
DG L +G+ + + +WD+ H G + + + G ++ + + D V R +D
Sbjct: 365 DGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGV-RLWD 423
Query: 757 VSTXK 771
+ K
Sbjct: 424 LRKLK 428
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWD 699
+L +WSMDG L +G D+ + VW + + H +V GV +D
Sbjct: 348 LLCCAWSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 396
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +1
Query: 562 ISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRV 741
I++S DG+ LA+ D L ++D + + + G + W G+Y+ + D +
Sbjct: 309 IAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDL 368
Query: 742 FRAFDVSTXKVV 777
+ + + KVV
Sbjct: 369 VQVWSMEDRKVV 380
Score = 31.9 bits (69), Expect = 0.49
Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 3/152 (1%)
Frame = +1
Query: 187 PEISWH-NRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLT 363
P WH + + S+ F ND LA+ G D ++ I+ ST + + +
Sbjct: 295 PVARWHIGQGAINSIAFS-----NDGAYLATVGRDGYLRIFDFSTQK-------LVCGVK 342
Query: 364 RHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGH 543
+ A+ WS +G+ L +G ++ ++ +W + ++ EG +WV +
Sbjct: 343 SYYGALLCCAWSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGH----NSWVSGVAFDSY 398
Query: 544 MEDVLDISWSMDGSQLASGSV--DNKLIVWDI 633
+ S + GSV D +L++WD+
Sbjct: 399 WSSP-NSEGSGENVMYRFGSVGQDTQLLLWDL 429
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 36.3 bits (80), Expect = 0.023
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Frame = +1
Query: 271 ASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQ-LLASGDDESIIF 447
AS D V +W + ++ ++ + H VNV+ W+ +LASG D+
Sbjct: 286 ASCSVDGSVAVWDIRLGKSPALSFKA------HNADVNVISWNRLASCMLASGSDDGTFS 339
Query: 448 IWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSM-DGSQLASGSVDNKLIV 624
I +L + A +Y H + I WS + S LA S DN+L +
Sbjct: 340 IRDLRLIKGGDAVVAHFEY------------HKHPITSIEWSAHEASTLAVTSGDNQLTI 387
Query: 625 WDI 633
WD+
Sbjct: 388 WDL 390
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 35.9 bits (79), Expect = 0.030
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Frame = +1
Query: 571 SMDGSQLASGSVDNKLIVW--------DIHRARYTTI----LSDHKGFVQGVCWDPKGQY 714
S+ ++ASG++ N++IVW ++ Y+ L+ H+G + + W G
Sbjct: 190 SISTLRIASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSK 249
Query: 715 ITSTSTDRVFRAFDVSTXKVV 777
I S S DR R +++ + +VV
Sbjct: 250 IVSVSDDRSARIWEIDSQEVV 270
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
L GH + I WS+DGS++ S S D +W+I
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEI 264
Score = 33.9 bits (74), Expect = 0.12
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = +1
Query: 262 LRLASGGTDSHVLIWYLSTTETGSV-HLEVAAD----LTRHQKAVNVVRWSPNGQLLASG 426
LR+ASG + +++W + +V H +A LT H+ ++ + WS +G + S
Sbjct: 194 LRIASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSV 253
Query: 427 DDESIIFIWK-QKLEELSPATEGEE-QYKETWVVYKTLRGHMEDVLDISWSMDGSQL 591
D+ IW+ E + P G + + + + ED W +DG+QL
Sbjct: 254 SDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISDSLIVTAGEDCTCRVWGVDGTQL 310
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 35.9 bits (79), Expect = 0.030
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Frame = +1
Query: 571 SMDGSQLASGSVDNKLIVW--------DIHRARYTTI----LSDHKGFVQGVCWDPKGQY 714
S+ ++ASG++ N++IVW ++ Y+ L+ H+G + + W G
Sbjct: 190 SISTLRIASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSK 249
Query: 715 ITSTSTDRVFRAFDVSTXKVV 777
I S S DR R +++ + +VV
Sbjct: 250 IVSVSDDRSARIWEIDSQEVV 270
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
L GH + I WS+DGS++ S S D +W+I
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEI 264
Score = 33.9 bits (74), Expect = 0.12
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = +1
Query: 262 LRLASGGTDSHVLIWYLSTTETGSV-HLEVAAD----LTRHQKAVNVVRWSPNGQLLASG 426
LR+ASG + +++W + +V H +A LT H+ ++ + WS +G + S
Sbjct: 194 LRIASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSV 253
Query: 427 DDESIIFIWK-QKLEELSPATEGEE-QYKETWVVYKTLRGHMEDVLDISWSMDGSQL 591
D+ IW+ E + P G + + + + ED W +DG+QL
Sbjct: 254 SDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISDSLIVTAGEDCTCRVWGVDGTQL 310
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 35.9 bits (79), Expect = 0.030
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Frame = +1
Query: 175 KFAIPEISW-----HNRDPVLSVDFQPK----AEPNDPLRLASGGTDSHVLIWYLSTTET 327
K +P I W H + VL++ A+ + + S GTD +++W+ T
Sbjct: 174 KLPLPSIKWDHHHIHEKRSVLTISGATATYGTADGSVVIASCSEGTD--IVLWH-GKTGR 230
Query: 328 GSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYK 507
H++ L H AV SPNG+ LA+ + + +W E+ +G K
Sbjct: 231 NLGHVDTN-QLKNHMAAV-----SPNGRFLAAAAFTADVKVW-----EIVYQKDGS--VK 277
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARY 648
E V + L+GH V + +S + Q+ + S D + VW+I+ RY
Sbjct: 278 EVSRVMQ-LKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNIN-VRY 322
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 475 SPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA 642
S A++ + + + TL+GH + V + +S DG LA+ D + V+ + A
Sbjct: 63 SQASDKNQNKRHHPLDLNTLKGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDA 118
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 35.5 bits (78), Expect = 0.040
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQ--LASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP 702
TL H + V + + G + L +GS D+ VWD L H V VC+ P
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 703 KGQYITSTSTDRVFRAFDVSTXKV 774
+ I + S D R + +T ++
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRL 263
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 35.5 bits (78), Expect = 0.040
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQ--LASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP 702
TL H + V + + G + L +GS D+ VWD L H V VC+ P
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 703 KGQYITSTSTDRVFRAFDVSTXKV 774
+ I + S D R + +T ++
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRL 263
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 35.5 bits (78), Expect = 0.040
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQ--LASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP 702
TL H + V + + G + L +GS D+ VWD L H V VC+ P
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 703 KGQYITSTSTDRVFRAFDVSTXKV 774
+ I + S D R + +T ++
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRL 263
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 35.5 bits (78), Expect = 0.040
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQ--LASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP 702
TL H + V + + G + L +GS D+ VWD L H V VC+ P
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
Query: 703 KGQYITSTSTDRVFRAFDVSTXKV 774
+ I + S D R + +T ++
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRL 263
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 35.1 bits (77), Expect = 0.053
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 352 ADLTRHQKAVNVVRWSPNG-QLLASGDDESIIFIWK 456
A+L RHQ +VN + W+P + + SG D++ IW+
Sbjct: 258 AELERHQASVNAIAWAPQSCKHICSGGDDTQALIWE 293
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 568 WS-MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVF 744
W+ ++ +L + S+D +WDI ++ T L H V + W + + S S D
Sbjct: 140 WNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWG-EARVFASVSADGSV 198
Query: 745 RAFDV 759
R FD+
Sbjct: 199 RIFDL 203
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 35.1 bits (77), Expect = 0.053
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 352 ADLTRHQKAVNVVRWSPNG-QLLASGDDESIIFIWK 456
A+L RHQ +VN + W+P + + SG D++ IW+
Sbjct: 258 AELERHQASVNAIAWAPQSCKHICSGGDDTQALIWE 293
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 568 WS-MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVF 744
W+ ++ +L + S+D +WDI ++ T L H V + W + + S S D
Sbjct: 140 WNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWG-EARVFASVSADGSV 198
Query: 745 RAFDV 759
R FD+
Sbjct: 199 RIFDL 203
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 35.1 bits (77), Expect = 0.053
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 352 ADLTRHQKAVNVVRWSPNG-QLLASGDDESIIFIWK 456
A+L RHQ +VN + W+P + + SG D++ IW+
Sbjct: 258 AELERHQASVNAIAWAPQSCKHICSGGDDTQALIWE 293
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 568 WS-MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVF 744
W+ ++ +L + S+D +WDI ++ T L H V + W + + S S D
Sbjct: 140 WNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWG-EARVFASVSADGSV 198
Query: 745 RAFDV 759
R FD+
Sbjct: 199 RIFDL 203
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 35.1 bits (77), Expect = 0.053
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 562 ISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDH--KGFVQGVCWDPKGQYITSTSTD 735
++++ GS LA+G D ++WD + D+ + V W G + ++ D
Sbjct: 29 VAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVSAAD 88
Query: 736 RVFRAFDVSTXKVV 777
+ +DVST + +
Sbjct: 89 KSLTLWDVSTGEKI 102
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 35.1 bits (77), Expect = 0.053
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Frame = +1
Query: 370 QKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHME 549
+K +N W P Q + SG +++ I IW + +L ++ E GH E
Sbjct: 175 KKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEV-------------GHKE 221
Query: 550 DVLDISWSMDGSQLASGSVDNKLIVWDIHR----ARYTTIL 660
+ + + D S +GS D +WD+ YTT++
Sbjct: 222 AITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVV 262
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/89 (28%), Positives = 37/89 (41%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHM 546
H++ + +R++ NG LL S + +W A GE T RGH
Sbjct: 36 HERPLTFLRYNRNGDLLFSCAKDHTPTVWF--------ADNGER--------LGTYRGHS 79
Query: 547 EDVLDISWSMDGSQLASGSVDNKLIVWDI 633
V S D S+L +GS D +WD+
Sbjct: 80 GAVWCCDISRDSSRLITGSADQTAKLWDV 108
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 35.1 bits (77), Expect = 0.053
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +1
Query: 523 YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP 702
Y +GH V IS G +ASGS D + +W++ R + + + V W+P
Sbjct: 416 YLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEA-IMCVAWNP 474
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 667 HKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXK 771
H G V + D G++I S STD R ++V T +
Sbjct: 422 HTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 35.1 bits (77), Expect = 0.053
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Frame = +1
Query: 328 GSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW-------------KQKLE 468
GS H H K +N + P +++A+GD + IW K+K+
Sbjct: 198 GSRHAVSRKMTLHHTKVINAFAFHPTERVIAAGDVTGRVLIWRGFGNRKLALGNQKKKVR 257
Query: 469 ELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
+ + ++ T H +V +++S DG+ L SG + L+VW +
Sbjct: 258 AMVDLDNAGVRGEDDAESCTTWHWHSAEVNVLNFSSDGAYLYSGGREGVLVVWQL 312
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 34.7 bits (76), Expect = 0.070
Identities = 43/171 (25%), Positives = 61/171 (35%)
Frame = +1
Query: 223 SVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSP 402
S +F K+E LA+ D V ++ +S E L L R V WSP
Sbjct: 153 SDEFHEKSEEEIDRILAAACDDGCVRLYRISNLEK----LTYYRSLPRVSGRALSVTWSP 208
Query: 403 NGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDG 582
+ + + SG + +I W AT E Y+ T L E + S+
Sbjct: 209 DAKRIFSGSSDGLIRCW--------DATSCHEVYRIT-AGLGGLGSSSEICVWSLLSLRC 259
Query: 583 SQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTD 735
S L SG + WD S+HKG V + P + S D
Sbjct: 260 SVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGAD 310
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 34.7 bits (76), Expect = 0.070
Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHR-ARYTTILSDHKGFVQGVCWDPKG 708
L GH++ +W +G LA+G+ D +WD+ ++ +L + G ++ + + G
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 709 QYITSTSTDRVFRAFD 756
+++ FD
Sbjct: 375 RFLAMAEPADFVHLFD 390
Score = 31.1 bits (67), Expect = 0.86
Identities = 26/117 (22%), Positives = 50/117 (42%)
Frame = +1
Query: 394 WSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWS 573
W PNGQ+LA+G+ ++ +W + LS + K L+G+M + + ++
Sbjct: 327 WHPNGQILATGNQDTTCRLW--DVRNLSQS-------------LKVLKGNMGAIRALRFT 371
Query: 574 MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVF 744
DG LA + + ++D D G + G+ + P + + DR +
Sbjct: 372 SDGRFLAMAEPADFVHLFDTEAGYSQCQEIDLFGEIAGISFSPDTEALFVGVADRTY 428
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTST 732
V +IS S DG +A + ++ D + L H + W P GQ + + +
Sbjct: 280 VNNISTSPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQ 339
Query: 733 DRVFRAFDV 759
D R +DV
Sbjct: 340 DTTCRLWDV 348
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 34.7 bits (76), Expect = 0.070
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +1
Query: 532 LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQ 711
L+GH + + I D L +GS D VW + R +L+ H G VQ V + P +
Sbjct: 1018 LKGHTKWIRSIRMVED--TLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDK 1075
Query: 712 YITSTSTDRVFRAFD 756
I + S D + R ++
Sbjct: 1076 GIITGSADGLLRFWE 1090
Score = 34.3 bits (75), Expect = 0.092
Identities = 26/83 (31%), Positives = 37/83 (44%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG 708
TL+GH V IS D ++ SGS D +IVWD + L H V V G
Sbjct: 894 TLKGHTGTVRAIS--SDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSG 950
Query: 709 QYITSTSTDRVFRAFDVSTXKVV 777
+ + + + D + +DV T V
Sbjct: 951 ERVLTAAHDGTVKMWDVRTDMCV 973
Score = 31.5 bits (68), Expect = 0.65
Identities = 36/166 (21%), Positives = 66/166 (39%)
Frame = +1
Query: 274 SGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW 453
SG TD V IW S GS E+ A L H V + S G+++ SG D+ + +W
Sbjct: 872 SGSTDCLVKIWDPSLR--GS---ELRATLKGHTGTVRAIS-SDRGKIV-SGSDDLSVIVW 924
Query: 454 KQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
K+T + + L+GH V + + G ++ + + D + +WD+
Sbjct: 925 D----------------KQTTQLLEELKGHDSQVSCVK-MLSGERVLTAAHDGTVKMWDV 967
Query: 634 HRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTXK 771
+ + + +D + + D V +D+ + K
Sbjct: 968 RTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGK 1013
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 34.7 bits (76), Expect = 0.070
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 268 LASGGTDSHVLIWYLSTT-ETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESII 444
+ +G D V +W +S GS L + L H V +R S ++ASG D+ +
Sbjct: 3345 VVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTV 3404
Query: 445 FIW 453
IW
Sbjct: 3405 IIW 3407
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = +1
Query: 397 SPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSM 576
S +G+++ +G ++ ++ +W+ + G + + + K L H V + S
Sbjct: 3339 SHDGRIVVTGAEDGLVCVWRVSKD----GPRGSRRLR----LEKALCAHTAKVTCLRVSQ 3390
Query: 577 DGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGV-CWDPKGQYITSTST 732
+ASGS D +I+WD+ + L D + + D G+ +T+ T
Sbjct: 3391 PYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAAGT 3443
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 34.3 bits (75), Expect = 0.092
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 430 DESIIFIWKQKL-----EELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLA 594
D S++ +W+++L S E + K L H V +S++ DG L
Sbjct: 12 DHSVVNVWERELGLLPNRSFSNRFSASEDLLRRLGLDKKLDKHKGCVNTVSFNADGDILL 71
Query: 595 SGSVDNKLIVWD 630
SGS D ++I+WD
Sbjct: 72 SGSDDRQVILWD 83
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 358 LTRHQKAVNVVRWSPNGQLLASGDDESIIFIW 453
L +H+ VN V ++ +G +L SG D+ + +W
Sbjct: 51 LDKHKGCVNTVSFNADGDILLSGSDDRQVILW 82
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 307 YLSTTETGS-VHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPA 483
Y S+T+T + +V + T + V + P + + SG D IFIW++K EL A
Sbjct: 288 YPSSTKTEERMTPQVYKEHTNRETVKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGELLRA 347
Query: 484 TEGE 495
E +
Sbjct: 348 MEAD 351
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 34.3 bits (75), Expect = 0.092
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 595 SGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
S S+D + +WDI R H+G V+G+ G + S TD R ++V
Sbjct: 74 SASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 361 TRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKL-EELSPATEGEEQYKETWVVYKTLR 537
T+ + V V++S + + SG D++ + +WK K E+L E++ E K
Sbjct: 319 TKRMQRVFCVKYSCDATYVISGSDDTNLRLWKAKASEQLGVILPREQKKHEYNEAVKNRY 378
Query: 538 GHMEDV 555
H+ +V
Sbjct: 379 KHLSEV 384
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 34.3 bits (75), Expect = 0.092
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 553 VLDISWS-MDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTS 729
+ W+ + ++ + S+D +WDI R T L H V + W G + S S
Sbjct: 138 ITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVF-ASVS 196
Query: 730 TDRVFRAFDV 759
D R FD+
Sbjct: 197 EDGSVRVFDL 206
Score = 34.3 bits (75), Expect = 0.092
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Frame = +1
Query: 208 RDPVLSVDFQPKAEPNDPL-RLASGGTDSHVLIWYLSTTETGSVHLEV---------AAD 357
RD S EP+ PL RL+ D Y++T GS + V +
Sbjct: 207 RDKEHSTIIYESGEPSTPLVRLSWNKQDPR----YMATVIMGSAKIVVLDIRFPALPVVE 262
Query: 358 LTRHQKAVNVVRWSPNGQL-LASGDDESIIFIW 453
L RHQ +VN + W+P+ + S D+S IW
Sbjct: 263 LQRHQASVNAIAWAPHSSSHICSAGDDSQALIW 295
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 34.3 bits (75), Expect = 0.092
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 19/162 (11%)
Frame = +1
Query: 205 NRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYL-----------------STTETGS 333
+R VLSVDF P +D R AS G D+ + IW + S T
Sbjct: 173 HRYEVLSVDFHP----SDIYRFASCGMDTTIKIWSMKEFWTYVEKSFTWTDDPSKFPTKF 228
Query: 334 VHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKET 513
V V + H V+ RW + L S D+E I +W+ +L+E SP EG
Sbjct: 229 VQFPVFT-ASIHTNYVDCNRWFGDFILSKSVDNE--ILLWEPQLKENSPG-EGASDVLLR 284
Query: 514 WVVYKTLRGHMEDVLDISWSMD--GSQLASGSVDNKLIVWDI 633
+ V M D+ I +S D S +A G+ + K+ VWD+
Sbjct: 285 YPV------PMCDIWFIKFSCDLHLSSVAIGNQEGKVYVWDL 320
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 274 SGGTDSHVLIWYLS-TTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFI 450
+G DS + I ++ T+E G+ +V ++ KA+ + + +G LL SG ++ ++ +
Sbjct: 233 AGARDSKIYIGAINATSEYGT---QVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCV 289
Query: 451 WKQK 462
W K
Sbjct: 290 WDPK 293
Score = 31.1 bits (67), Expect = 0.86
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Frame = +1
Query: 511 TWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVW-------DIHRARYTTI---- 657
T + K GH V + +S D S L SGS D + VW D R + T+
Sbjct: 109 TGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHN 168
Query: 658 LSDHKGFVQGVCWDPKG--QYITSTSTDRVFRAFDVSTXKVV 777
++H V + D G I S+S DR + + +S K++
Sbjct: 169 FNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLL 210
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 562 ISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQG 687
+++ DG+ L SGS D + VWD R+ L KG +G
Sbjct: 269 LAYCADGNLLISGSEDGVVCVWDPKSLRHVRTLIHAKGSRKG 310
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 310 LSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW 453
+S +E L++ L H+ VN V ++ G +L SG D+ I +W
Sbjct: 35 ISASEGRVKKLDLYGKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLW 82
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 373 KAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQ 501
K VN + PN + + SG D IFIWK+K +L A G+ +
Sbjct: 324 KGVNF--FGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRR 364
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWD 630
+Y L GH V + ++ G L SGS D ++++W+
Sbjct: 47 LYGKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWN 83
Score = 27.9 bits (59), Expect = 8.0
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 11/99 (11%)
Frame = +1
Query: 247 EPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLT------RHQKAVNVVR----- 393
+P + LA GG+D + ++ + V V D RH + N V
Sbjct: 209 DPRNSYYLAVGGSDEYARVYDTRRVQLAPVCRHVLPDAPVNTFCPRHLRETNSVHITGLA 268
Query: 394 WSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKE 510
+S G+LL S +DE I K SP + E+ +E
Sbjct: 269 YSKAGELLVSYNDELIYLFEKNMGYGSSPVSVSPEKLQE 307
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGS-QLASGSVDNKLIVWDIHRARYTTILSD 666
TL GH + V+ + WS L +G D + WDI RA +L +
Sbjct: 185 TLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDN 231
Score = 28.3 bits (60), Expect = 6.0
Identities = 28/125 (22%), Positives = 52/125 (41%)
Frame = +1
Query: 253 NDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDD 432
ND + L S G+ S + +W + + V+ E T +A+ L + DD
Sbjct: 322 NDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQT--DRAIQ----------LDTSDD 369
Query: 433 ESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDN 612
+++F+ K +G + + LRGH E V ++ + +L + D
Sbjct: 370 PALVFVPCMK------TVKGFGMWSGRTTLM--LRGHYESVNTCCFNSNDQELYTSGADR 421
Query: 613 KLIVW 627
++IVW
Sbjct: 422 QIIVW 426
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHK--GFVQGVCWD 699
+T GH + V DI +S DGS+ + D + WD + + S K V+ D
Sbjct: 320 RTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDD 379
Query: 700 PKGQYITSTSTDRVFRAFDVSTXKV 774
K + + +D+ +D++T +V
Sbjct: 380 DKQNILLAGMSDKKIVQWDINTGEV 404
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +1
Query: 589 LASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVSTX 768
L +G D K++ WDI+ T H G V + + + ++S D+ R ++
Sbjct: 385 LLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP 444
Query: 769 KVV 777
V+
Sbjct: 445 VVI 447
Score = 31.9 bits (69), Expect = 0.49
Identities = 28/136 (20%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Frame = +1
Query: 226 VDFQPKAEPNDPLR--LASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWS 399
+ + K P+D + L +G +D ++ W ++T E V + +H AVN + +
Sbjct: 369 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGE-------VTQEYDQHLGAVNTITFV 421
Query: 400 PNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMD 579
N + + D+ + +W ++ V+ HM + IS +
Sbjct: 422 DNNRRFVTSSDDKSLRVW---------------EFGIPVVIKYISEPHMHSMPSISVHPN 466
Query: 580 GSQLASGSVDNKLIVW 627
G+ LA+ S+DN+++++
Sbjct: 467 GNWLAAQSLDNQILIY 482
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +1
Query: 562 ISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITST 726
+++S DG + SG + K WD + L H G G W P Q +T
Sbjct: 508 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVAT 562
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 556 LDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDP-KGQYITSTST 732
L +W + + +ASGS D K+ VWD+ + + H+ V V W+ + + S S
Sbjct: 220 LTFNWE-NRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSR 278
Query: 733 DR 738
DR
Sbjct: 279 DR 280
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +1
Query: 505 KETWVVYKTLRGHMEDVLDISW-----SMDGSQLASGSVDNKLIVWDIHRARYTTILSDH 669
K + K L GH V ++W +L SGS+D + VW++ L H
Sbjct: 53 KRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Query: 670 KGFVQGVCWDPKGQYITSTSTDRVFR 747
+ V GV D + I S+S D+ +
Sbjct: 113 QMQVTGVAID--NEDIVSSSVDQTLK 136
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +1
Query: 505 KETWVVYKTLRGHMEDVLDISW-----SMDGSQLASGSVDNKLIVWDIHRARYTTILSDH 669
K + K L GH V ++W +L SGS+D + VW++ L H
Sbjct: 53 KRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Query: 670 KGFVQGVCWDPKGQYITSTSTDRVFR 747
+ V GV D + I S+S D+ +
Sbjct: 113 QMQVTGVAID--NEDIVSSSVDQTLK 136
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGS-QLASGSVDNKLIVWDIHRA 642
TL GH + V+ + WS L +G D + WDI RA
Sbjct: 185 TLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRA 223
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +1
Query: 586 QLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
++ + S D +WDI R T L H V + W G + S S D R FD+
Sbjct: 150 RIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF-ASVSADGSVRVFDL 206
Score = 31.5 bits (68), Expect = 0.65
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 355 DLTRHQKAVNVVRWSPNGQL-LASGDDESIIFIW 453
+L RHQ +VN + W+P+ + + D+S IW
Sbjct: 262 ELQRHQASVNAIAWAPHSSCHICTAGDDSQALIW 295
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSM-DGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQ-GVCWD 699
+TLR H + + + D L SG D + WD+ A + L HK +V+ G C
Sbjct: 129 RTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSP 188
Query: 700 PKGQYITSTSTDRVFRAFD 756
+ + S D + +D
Sbjct: 189 VNDSMLVTGSYDHTVKVWD 207
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 32.3 bits (70), Expect = 0.37
Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 4/158 (2%)
Frame = +1
Query: 274 SGGTDSHVLIWYLSTT--ETGSVHLEVAADLTRHQKAVNVVRWSPNG--QLLASGDDESI 441
S G IW + ++ S LE A L H +N V W P+G L S D++++
Sbjct: 86 STGDSYGAAIWQIPEPYGQSNSSTLECVASLDAHVGKINCVLWCPSGNSDKLISMDEQNL 145
Query: 442 IFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLI 621
+F W + K V+ K G + +W+ + + ++ +
Sbjct: 146 VF-WSL-----------DSSKKSAEVLSKESAGMRHSLSGGAWNPHDVNSVAATSESSIQ 193
Query: 622 VWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTD 735
WD+ + S + V+ V ++ K ++I ++ D
Sbjct: 194 FWDLRTMKKNN--SIERAHVRNVDYNLKREHILVSADD 229
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/74 (20%), Positives = 31/74 (41%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPK 705
K H + VL +W DG+ + +G D + +W + + ++ H + W P
Sbjct: 67 KVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPG 126
Query: 706 GQYITSTSTDRVFR 747
+ + S D+ +
Sbjct: 127 MNLLVTGSWDKTLK 140
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 607 DNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDV 759
D +L ++H + S+ + + W P G YITS S D V FD+
Sbjct: 417 DIRLRKTELHSFGWKQDSSESQSALINQSWSPDGLYITSGSVDPVIHVFDI 467
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWDI-HRARY-TTILSDHKGFVQGVCWDPKGQYITST 726
+++ SWS DG + SGSVD + V+DI + AR T + H+ V W + S
Sbjct: 441 LINQSWSPDGLYITSGSVDPVIHVFDIRYNARKPTQSIKAHQKRVFKAEWHYSQPLLISI 500
Query: 727 STD 735
S+D
Sbjct: 501 SSD 503
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +1
Query: 247 EPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASG 426
EP + +GG D V ++ T + E+ + H V+ VR++P G+ ASG
Sbjct: 236 EPKSGNKFVAGGEDMWVRLFDFHTGK------EIGCN-KGHHGPVHCVRFAPTGESYASG 288
Query: 427 DDESIIFIWK 456
++ I IW+
Sbjct: 289 SEDGTIRIWQ 298
Score = 31.1 bits (67), Expect = 0.86
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +1
Query: 538 GHMEDVLDISWSM---DGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG 708
GH V+D+ +S DG L S S D++ ++ + + HKG V C D
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 709 QYITSTSTDRVFRAFDVSTXKVV 777
S S D + +D T V+
Sbjct: 74 LRAASASADFSAKLWDALTGDVL 96
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/78 (21%), Positives = 31/78 (39%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKG 708
T GH V + + AS S D +WD +HK V+ +
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSF-EHKHIVRACAFSQDT 114
Query: 709 QYITSTSTDRVFRAFDVS 762
+Y+ + +++ R FD++
Sbjct: 115 KYLITGGFEKILRVFDLN 132
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA 642
+T GH V ++ S D + L +GS D+ +++W IH+A
Sbjct: 2662 ETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKA 2700
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +1
Query: 247 EPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASG 426
EP + +GG D V ++ T E E+ + H V+ VR++P G ASG
Sbjct: 236 EPKSGEKFVAGGEDMWVRVFDFYTGE------EIGCN-KGHHGPVHCVRFTPTGLSYASG 288
Query: 427 DDESIIFIWK 456
++ I IW+
Sbjct: 289 SEDGTIRIWQ 298
Score = 31.1 bits (67), Expect = 0.86
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Frame = +1
Query: 505 KETWVVYKTLRGHMEDVLDISWSM---DGSQLASGSVDNKLIVWDIHRARYTTILSDHKG 675
K+ + + GH V+D+ +S DG L S S D+ ++ + + HKG
Sbjct: 3 KKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKG 62
Query: 676 FVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
V C D S S D + +D T V+
Sbjct: 63 AVWSSCLDNNALRAASASADFSAKLWDALTGDVL 96
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +1
Query: 247 EPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASG 426
EP + +GG D V ++ T E E+ + H V+ VR++P G ASG
Sbjct: 236 EPKSGEKFVAGGEDMWVRVFDFYTGE------EIGCN-KGHHGPVHCVRFTPTGLSYASG 288
Query: 427 DDESIIFIWK 456
++ I IW+
Sbjct: 289 SEDGTIRIWQ 298
Score = 31.1 bits (67), Expect = 0.86
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Frame = +1
Query: 505 KETWVVYKTLRGHMEDVLDISWSM---DGSQLASGSVDNKLIVWDIHRARYTTILSDHKG 675
K+ + + GH V+D+ +S DG L S S D+ ++ + + HKG
Sbjct: 3 KKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKG 62
Query: 676 FVQGVCWDPKGQYITSTSTDRVFRAFDVSTXKVV 777
V C D S S D + +D T V+
Sbjct: 63 AVWSSCLDNNALRAASASADFSAKLWDALTGDVL 96
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.9 bits (69), Expect = 0.49
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
Frame = +1
Query: 376 AVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDV 555
+VN V WSP+G L I+ ++ + G E ++ + + H+ V
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLY---------SYHGGEDMRQ----HLEIDAHVGGV 465
Query: 556 LDISWSMDGSQLASGSV-DNKLI-VWDIHRARYTTILSDHKGFVQGVC--WDPKGQYITS 723
DIS+S QL + D+K I VWD H+ V VC + Q+I S
Sbjct: 466 NDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFS 525
Query: 724 TSTDRVFRAF 753
T+ D +A+
Sbjct: 526 TALDGKIKAW 535
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.9 bits (69), Expect = 0.49
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
Frame = +1
Query: 376 AVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDV 555
+VN V WSP+G L I+ ++ + G E ++ + + H+ V
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLY---------SYHGGEDMRQ----HLEIDAHVGGV 465
Query: 556 LDISWSMDGSQLASGSV-DNKLI-VWDIHRARYTTILSDHKGFVQGVC--WDPKGQYITS 723
DIS+S QL + D+K I VWD H+ V VC + Q+I S
Sbjct: 466 NDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFS 525
Query: 724 TSTDRVFRAF 753
T+ D +A+
Sbjct: 526 TALDGKIKAW 535
>At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3
WD-40 repeats (PF00400); similarity to WD-repeat protein
8 (WDR8)(SP:Q9P2S5] [HOMO SAPIENS]
Length = 458
Score = 31.5 bits (68), Expect = 0.65
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQLA--SGSVDNKLIVWDIHRARYTTILSDHKGF- 678
++W + + D+ D+ WS D S + ++ K++++ + G
Sbjct: 165 QSWEIMGSFAVDTLDLADLEWSPDDSSIVVWDSPLEYKVLIYSPDGRCLFKYQAYECGLG 224
Query: 679 VQGVCWDPKGQYITSTSTDRVFRAFDVSTXK 771
V+ V W P GQ++ S D++ R + T K
Sbjct: 225 VKTVSWSPCGQFLAIGSYDQMLRVLNHLTWK 255
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/63 (19%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 544 MEDVLDISWSMDGSQLASGSVDNKLI-VWDIHRARYTTILSDHKGFVQGVCWDPKGQYIT 720
++ + I W++D + G +I W + + +T + + + W P ++I
Sbjct: 47 LDKISYIEWALDSEYILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGISYARWSPDSRHIL 106
Query: 721 STS 729
+TS
Sbjct: 107 TTS 109
>At1g26140.1 68414.m03191 hypothetical protein
Length = 162
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCW 696
KTL+ MEDV + WS +G GS + DI R LS +KGF+ G W
Sbjct: 96 KTLQPTMEDVKEEHWSGNGFPFEEGS-SRSICFEDIDRMLQE--LSMNKGFLFGSFW 149
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 31.1 bits (67), Expect = 0.86
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +1
Query: 556 LDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTD 735
++ +++ DG + SGS D L W+I ++ G V + W P+ + ST
Sbjct: 248 IEATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAASTV 307
Query: 736 RVF 744
F
Sbjct: 308 LTF 310
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/79 (22%), Positives = 31/79 (39%)
Frame = +1
Query: 520 VYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWD 699
+ + +GH + V+ + S SGS+D + +WD+ IL H V +D
Sbjct: 106 ILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNACQGIL--HLRGRPAVAYD 163
Query: 700 PKGQYITSTSTDRVFRAFD 756
+G + FD
Sbjct: 164 QQGLVFAIAMEGGAVKLFD 182
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.1 bits (67), Expect = 0.86
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Frame = +1
Query: 376 AVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDV 555
+V V WSP+G LL + +I ++ + +L Q+ E + H+ V
Sbjct: 411 SVTRVAWSPDGNLLGVSFTKHLIHVYAYQGSDL-------RQHLE-------IDAHVGCV 456
Query: 556 LDISWSMDGSQLASGSV-DNKLI-VWDIHRARYTTILSDHKGFVQGVCWDPKG--QYITS 723
D++++ Q+ + D+KLI VWD+ + T H+ V +C K Q+I S
Sbjct: 457 NDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKLFT-FEGHEAPVYSICPHQKENIQFIFS 515
Query: 724 TSTDRVFRAF 753
T+ D +A+
Sbjct: 516 TALDGKIKAW 525
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 31.1 bits (67), Expect = 0.86
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 583 SQLASGSVDNKLIVWDIHRARYTTILSDHK 672
SQ+AS + D + +WD+ R++ T + +HK
Sbjct: 597 SQIASSNFDGVVQIWDVARSQLVTEMKEHK 626
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +1
Query: 256 DPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDE 435
D L S TD+ + +W LS + +G ++ T H N V S + +A+G +
Sbjct: 714 DSSTLVSSSTDNTLKLWDLSMSASG-INESPLHSFTGHTNLKNFVGLSVSDGYIATGSET 772
Query: 436 SIIFIW 453
+ +F++
Sbjct: 773 NEVFVY 778
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
T+ GH + V + + +D S L S S DN L +WD+
Sbjct: 699 TMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLWDL 732
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 31.1 bits (67), Expect = 0.86
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 571 SMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGV 690
S DG LA+G L ++D+ + YT + H+ +Q +
Sbjct: 394 SEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSL 433
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 232 FQPKAEPNDPLRLASGGTDSHVLIWYLSTTE--TGSVHLEVAADLTRHQKAVNVVRWSPN 405
F+ + DP+++ + ++++ Y + T V E+ A T H +AV V + P+
Sbjct: 564 FKQDRDHGDPVKVILDPSCNYLVCSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPD 623
Query: 406 GQLLASGDDESIIFIWKQKL 465
+ + S + IF+WK L
Sbjct: 624 CKHIISVASDGCIFVWKLPL 643
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 31.1 bits (67), Expect = 0.86
Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 4/143 (2%)
Frame = +1
Query: 337 HLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETW 516
H E L +H + V+ + WS + + + ++W + EG E + T
Sbjct: 44 HWERLHVLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVW---------SLEGAE-WVPTL 93
Query: 517 VVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARY----TTILSDHKGFVQ 684
V+ + R L + WS ++ A GS + + + I H+ V
Sbjct: 94 VILRLNRA----ALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVT 149
Query: 685 GVCWDPKGQYITSTSTDRVFRAF 753
V W P + +TSTD R F
Sbjct: 150 SVAWHPNNVLLATTSTDGKCRVF 172
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Frame = +1
Query: 355 DLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTL 534
D+ R +++ WSP+ ++A + + + I+K LS ++ W L
Sbjct: 5 DVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKS----LS---------QDHWERLHVL 51
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVC--WDPK 705
+ H + V I WS +++ + S D VW + A + L + +C W PK
Sbjct: 52 QKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPK 110
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 31.1 bits (67), Expect = 0.86
Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 4/143 (2%)
Frame = +1
Query: 337 HLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETW 516
H E L +H + V+ + WS + + + ++W + EG E + T
Sbjct: 44 HWERLHVLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVW---------SLEGAE-WVPTL 93
Query: 517 VVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARY----TTILSDHKGFVQ 684
V+ + R L + WS ++ A GS + + + I H+ V
Sbjct: 94 VILRLNRA----ALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVT 149
Query: 685 GVCWDPKGQYITSTSTDRVFRAF 753
V W P + +TSTD R F
Sbjct: 150 SVAWHPNNVLLATTSTDGKCRVF 172
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Frame = +1
Query: 355 DLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTL 534
D+ R +++ WSP+ ++A + + + I+K LS ++ W L
Sbjct: 5 DVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKS----LS---------QDHWERLHVL 51
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVC--WDPK 705
+ H + V I WS +++ + S D VW + A + L + +C W PK
Sbjct: 52 QKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPK 110
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 31.1 bits (67), Expect = 0.86
Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 4/143 (2%)
Frame = +1
Query: 337 HLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETW 516
H E L +H + V+ + WS + + + ++W + EG E + T
Sbjct: 44 HWERLHVLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVW---------SLEGAE-WVPTL 93
Query: 517 VVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARY----TTILSDHKGFVQ 684
V+ + R L + WS ++ A GS + + + I H+ V
Sbjct: 94 VILRLNRA----ALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVT 149
Query: 685 GVCWDPKGQYITSTSTDRVFRAF 753
V W P + +TSTD R F
Sbjct: 150 SVAWHPNNVLLATTSTDGKCRVF 172
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Frame = +1
Query: 355 DLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTL 534
D+ R +++ WSP+ ++A + + + I+K LS ++ W L
Sbjct: 5 DVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKS----LS---------QDHWERLHVL 51
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVC--WDPK 705
+ H + V I WS +++ + S D VW + A + L + +C W PK
Sbjct: 52 QKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPK 110
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 0.86
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
Frame = +1
Query: 376 AVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDV 555
+VN V WSP+G L I+ ++ + G E ++ + + H+ V
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLY---------SYHGGEDMRQ----HLEIDAHVGGV 465
Query: 556 LDISWSMDGSQLASGSV-DNKLI-VWDIHRARYTTILSDHKGFVQGVC--WDPKGQYITS 723
DI++S QL + D+K I VWD H+ V +C + Q+I S
Sbjct: 466 NDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFS 525
Query: 724 TSTDRVFRAF 753
T+ D +A+
Sbjct: 526 TALDGKIKAW 535
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 0.86
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
Frame = +1
Query: 376 AVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQYKETWVVYKTLRGHMEDV 555
+VN V WSP+G L I+ ++ + G E ++ + + H+ V
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLY---------SYHGGEDMRQ----HLEIDAHVGGV 465
Query: 556 LDISWSMDGSQLASGSV-DNKLI-VWDIHRARYTTILSDHKGFVQGVC--WDPKGQYITS 723
DI++S QL + D+K I VWD H+ V +C + Q+I S
Sbjct: 466 NDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFS 525
Query: 724 TSTDRVFRAF 753
T+ D +A+
Sbjct: 526 TALDGKIKAW 535
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 31.1 bits (67), Expect = 0.86
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 541 HMEDVLDISWSM-DGSQLASGSVDNKLIVWDIHRARY-TTILSDHKGFVQGVCWDP-KGQ 711
H ++L W+ D LA+ SVD + VWD+ R +L+ H V+ V + P +
Sbjct: 191 HDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRS 250
Query: 712 YITSTSTD 735
I S S D
Sbjct: 251 LIASCSYD 258
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILS--DHKGFVQGVCWDPKGQYITST 726
+++ SWS DG ++SGS D + ++DI + LS HK V W + S
Sbjct: 585 LINQSWSPDGLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEWHSSYPLLVSI 644
Query: 727 STD 735
S+D
Sbjct: 645 SSD 647
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = +1
Query: 481 ATEGEEQYKETWVV-----YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRAR 645
AT G +++ W V + GH V + + S+L SGS D + VW++
Sbjct: 238 ATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKA 297
Query: 646 YTTILSDHKGFVQGV 690
+ T H+G + +
Sbjct: 298 FITENHGHQGEILAI 312
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 244 AEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLAS 423
A +D LA+GG D HV IW + T E H++ H+ V+ + + L S
Sbjct: 229 AVSSDGRYLATGGVDRHVHIWDVRTRE----HVQA---FPGHRNTVSCLCFRYGTSELYS 281
Query: 424 GDDESIIFIW 453
G + + +W
Sbjct: 282 GSFDRTVKVW 291
>At1g36370.1 68414.m04518 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 598
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 265 RLASGGTDSHVLIWYLSTTE-TGSVHLEV 348
RL +GGTD+H+L+W L+ TG V+ +V
Sbjct: 466 RLVTGGTDNHLLLWDLTPMGLTGKVYEKV 494
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 523 YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA 642
YK LRGH V +S G+ + S S D + +W+ + +
Sbjct: 198 YKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNES 237
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 523 YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRA 642
YK LRGH V +S G+ + S S D + +W+ + +
Sbjct: 198 YKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNES 237
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +1
Query: 553 VLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTS 729
V + W DG +A G D + + D+ + L H V + W+ GQ T S
Sbjct: 67 VTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDGQSNTDES 125
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 568 WSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFR 747
W+ + LA + D+K+++ + R TI S K V +CW P G+ I D
Sbjct: 32 WNPEKDLLAMVTEDSKILLHRFNWQRLWTI-SPGKP-VTSLCWRPDGKAIAVGLEDGTIS 89
Query: 748 AFDVSTXKVV 777
DV K++
Sbjct: 90 LHDVENGKLL 99
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 535 RGHMEDVLDISW-SMDGSQLASGSVDNKLIVWDI 633
RGH + V D+++ + D LAS S+D K+ VW I
Sbjct: 199 RGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKI 232
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 535 RGHMEDVLDISW-SMDGSQLASGSVDNKLIVWDI 633
RGH + V D+++ + D LAS S+D K+ VW I
Sbjct: 234 RGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKI 267
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +1
Query: 253 NDPLRLASGGTDSHVLIWYLSTTETGS--VHLEVAADLTRHQKAVNVVRWSPNGQLLASG 426
+D R+ + D +L + ETG+ HLE A H+ AVN + + +ASG
Sbjct: 61 DDGQRIVTASADCSILA---TDVETGAQVAHLENA-----HEDAVNTLI-NVTETTIASG 111
Query: 427 DDESIIFIWKQKLEELSPATEGEEQY 504
DD+ + IW + S E Y
Sbjct: 112 DDKGCVKIWDTRQRSCSHEFNAHEDY 137
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/89 (20%), Positives = 37/89 (41%)
Frame = +1
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQG 687
ET L ED ++ ++ + +ASG + +WD + + + H+ ++ G
Sbjct: 81 ETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISG 140
Query: 688 VCWDPKGQYITSTSTDRVFRAFDVSTXKV 774
+ + + TS D ++ T KV
Sbjct: 141 MTFASDSMKLVVTSGDGTLSVCNLRTSKV 169
>At1g22020.1 68414.m02755 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 599
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 265 RLASGGTDSHVLIWYLSTTE-TGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASG 426
+L +GGTD+H+L+W L+ TG V+ +V H V +S NG + G
Sbjct: 470 KLITGGTDNHLLLWDLTPLGLTGKVYEKVCE--MCHITVNKVAIFSENGVISPGG 522
>At3g45290.1 68416.m04890 seven transmembrane MLO family protein /
MLO-like protein 3 (MLO3) membrane protein Mlo3
[Arabidopsis thaliana] gi|14091576|gb|AAK53796; similar
to MLO protein SWISS-PROT:P93766, NCBI_gi:1877221
[Hordeum vulgare][Barley]
Length = 508
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = -1
Query: 704 LGSQQTPCTNPLWSLSIV----V*RALCMSQTINLLSTEPEANCEPSILQDMSRTSSM 543
+G+ ++ P W+L+ V + ++C+ + INLLST + N + S+L+ + + S+
Sbjct: 13 VGAVRSLQETPTWALATVCFFFIAVSICLERLINLLSTRLKKNRKTSLLEAVEKLKSV 70
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWD 630
+GH + V+ +S G SGS+D +++WD
Sbjct: 117 KGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 148
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 535 RGHMEDVLDISWSMDGSQLASGSVDNKLIVWD 630
+GH + V+ +S G SGS+D +++WD
Sbjct: 114 KGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 145
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +1
Query: 520 VYKTLR-GHME---DVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTIL 660
+YKTLR GH V I W ++ +G +D+KL++WD + R I+
Sbjct: 139 LYKTLRAGHTSICSSVQFIPWRP--WEVITGGLDSKLVLWDFSKGRSQKII 187
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 346 VAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW-KQKLEE 471
+ A L H+ AVN + S + S D+S + +W +KLE+
Sbjct: 1073 LVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEK 1115
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/89 (20%), Positives = 37/89 (41%)
Frame = +1
Query: 508 ETWVVYKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQG 687
ET L ED ++ ++ + +ASG + +WD + + + H+ ++ G
Sbjct: 24 ETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISG 83
Query: 688 VCWDPKGQYITSTSTDRVFRAFDVSTXKV 774
+ + + TS D ++ T KV
Sbjct: 84 MTFASDSMKLVVTSGDGTLSVCNLRTSKV 112
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 322 ETGS--VHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGE 495
ETG+ HLE A H+ AVN + + +ASGDD+ + IW + S
Sbjct: 24 ETGAQVAHLENA-----HEDAVNTLI-NVTETTIASGDDKGCVKIWDTRQRSCSHEFNAH 77
Query: 496 EQY 504
E Y
Sbjct: 78 EDY 80
>At5g14720.1 68418.m01727 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 674
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/106 (19%), Positives = 41/106 (38%)
Frame = +1
Query: 184 IPEISWHNRDPVLSVDFQPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLT 363
+P + R V S D PK N SGGT S + + + S+ + +
Sbjct: 532 VPHVEHKGRFKVTSADLSPKGSTNSTFTPFSGGTSSPSCLNATTASILPSIQSILQQNAM 591
Query: 364 RHQKAVNVVRWSPNGQLLASGDDESIIFIWKQKLEELSPATEGEEQ 501
+ ++ + ++++ G E+ + L + PAT E +
Sbjct: 592 QREEILRLIKYLEQTSAKQPGSPETNV----DDLLQTPPATSRERE 633
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 523 YKTLRGHMEDVLDISW-SMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWD 699
Y G +L + W + S + +GS + L ++DI +A T S H V +D
Sbjct: 480 YIPSNGSQSTILGLCWLKIYPSMVIAGSANGSLKLYDIQKASSTVTTSSH-STSGSVTFD 538
Query: 700 PKGQY--ITSTSTDRVFRA 750
Q + + STD++F A
Sbjct: 539 EFDQLTSVHANSTDQLFLA 557
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 526 KTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDH 669
K L GH V D +S+DG L + S D +W + + + H
Sbjct: 247 KVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 535 RGHMEDVLDISW-SMDGSQLASGSVDNKLIVWDI 633
RGH + V D+++ + D LAS S+D K+ VW I
Sbjct: 218 RGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKI 251
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHR 639
TL GH + V + + MD + S S DN L +W++++
Sbjct: 889 TLAGHEKAVSYVKF-MDSETIVSASTDNSLKLWNLNK 924
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 523 YKTLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWD 630
Y++L L ++WS D ++ SGS D + WD
Sbjct: 191 YRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCWD 226
>At5g05570.1 68418.m00605 transducin family protein / WD-40 repeat
family protein similar to unknown protein (pir||T04661);
contains Pfam PF00400: WD domain, G-beta repeat (4
copies, 2 weak)|8683726|gb|AV524198.1|AV524198
Length = 1124
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 547 EDVLDISW-SMDGSQLASGSVDNKLIVWD 630
+++ + W S DGS LA G VD ++ WD
Sbjct: 256 KEISSLCWASTDGSVLAVGYVDGDILFWD 284
>At1g72650.2 68414.m08402 myb family transcription factor contains
Pfam PF00249: Myb-like DNA-binding domain
Length = 630
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 649 CNELCVCPKQLICYLLSQKPTVSHPYSRICQGHLPC-ALEESYK 521
C+ PK+ +QKP S IC +LP AL+E+++
Sbjct: 212 CSNAVASPKETALSAAAQKPDFSRVRGEICLDNLPIKALQETFR 255
>At1g72650.1 68414.m08401 myb family transcription factor contains
Pfam PF00249: Myb-like DNA-binding domain
Length = 624
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 649 CNELCVCPKQLICYLLSQKPTVSHPYSRICQGHLPC-ALEESYK 521
C+ PK+ +QKP S IC +LP AL+E+++
Sbjct: 206 CSNAVASPKETALSAAAQKPDFSRVRGEICLDNLPIKALQETFR 249
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
T+ GH + V + + +D S L S S DN L +WD+
Sbjct: 657 TMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLWDL 690
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 529 TLRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDI 633
T+ GH + V + + +D S L S S DN L +WD+
Sbjct: 657 TMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLWDL 690
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIW 453
H V+ VR++P G+ SG ++ + IW
Sbjct: 264 HHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 28.3 bits (60), Expect = 6.0
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +1
Query: 409 QLLASGDDESIIFIWKQK--LEELSPATEGEEQYKETWVVYKTLRGHMEDVLDISWSMDG 582
+LL +G + I WK L L T +++ E L GH + ++ +D
Sbjct: 215 KLLVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKTEF-----RLWGHEGPITSLA--LDM 267
Query: 583 SQLASGSVDNKLIVWDIHRARYTTILSDHKGFVQGVCWDPKGQYITSTSTDRVFRAFDVS 762
+ + SGS D + +WD + L H +V G+ P + STS V+ +DVS
Sbjct: 268 TSIFSGSWDMSVRIWDRSSMKCVKTLR-HSDWVWGLA--PHETTLASTSGSDVY-IWDVS 323
Query: 763 T 765
+
Sbjct: 324 S 324
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 367 HQKAVNVVRWSPNGQLLASGDDESIIFIWK-QKLEEL 474
H V+ V + PNG L+A+ E I IW +K EE+
Sbjct: 280 HPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEV 316
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 7/117 (5%)
Frame = +1
Query: 346 VAADLTRHQKAVNVVRWSPNGQLLASGDDESIIFIW---KQKLEELSPATEGEEQYKETW 516
V + H+ V+ V + + +LA+G ++ + +W + + E E ++
Sbjct: 1038 VVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEKRVRNTHAEVLRKDI 1097
Query: 517 VVYKT----LRGHMEDVLDISWSMDGSQLASGSVDNKLIVWDIHRARYTTILSDHKG 675
V+ L GH + + + S D + SGS D + + RY L G
Sbjct: 1098 VIADAPSHILCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHPSG 1154
>At4g11450.1 68417.m01843 expressed protein
Length = 694
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 235 QPKAEPNDPLRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQ 372
QP E PL+L G H+ Y+S E G + A L+ Q
Sbjct: 569 QPLVENQHPLQLFVQGAKEHIPALYMSFVEEGQYDVHFHAQLSTLQ 614
>At2g44030.1 68415.m05474 kelch repeat-containing F-box family
protein low similarity to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 380
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 262 LRLASGGTDSHVLIWYLSTTETGSVHLEVAADLTRHQKAVNVVRWSPNGQLLASGDDES 438
L +AS G V +W+ + T+ + A L + V+ WS N L + +S
Sbjct: 305 LSVASPGGGRRVTVWWKTYTKECKTEIWCALILLERELVWGVIEWSENVFTLPGSESDS 363
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,312,636
Number of Sequences: 28952
Number of extensions: 368878
Number of successful extensions: 1930
Number of sequences better than 10.0: 213
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1765
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1746037600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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