Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_A16
(613 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4S7N9 Cluster: Chromosome 18 SCAF14712, whole genome s... 85 1e-15
UniRef50_A0JMT9 Cluster: LOC779090 protein; n=6; Tetrapoda|Rep: ... 82 1e-14
UniRef50_UPI00015B5DEE Cluster: PREDICTED: similar to programmed... 77 3e-13
UniRef50_UPI0000F2B0DB Cluster: PREDICTED: similar to KIAA0185; ... 77 4e-13
UniRef50_UPI0000E22681 Cluster: PREDICTED: programmed cell death... 74 2e-12
UniRef50_Q14690 Cluster: RRP5 protein homolog; n=32; Amniota|Rep... 74 2e-12
UniRef50_Q1ED11 Cluster: Pdcd11 protein; n=6; Danio rerio|Rep: P... 73 4e-12
UniRef50_Q7PQF3 Cluster: ENSANGP00000011318; n=1; Anopheles gamb... 73 5e-12
UniRef50_O74835 Cluster: U3 snoRNP-associated protein Rrp5; n=1;... 72 9e-12
UniRef50_Q0IED9 Cluster: Programmed cell death protein 11; n=1; ... 71 2e-11
UniRef50_A7SBJ3 Cluster: Predicted protein; n=3; Nematostella ve... 69 9e-11
UniRef50_Q9VC94 Cluster: CG5728-PA; n=2; Sophophora|Rep: CG5728-... 68 2e-10
UniRef50_A4QSV3 Cluster: Putative uncharacterized protein; n=2; ... 66 8e-10
UniRef50_Q6C430 Cluster: Yarrowia lipolytica chromosome E of str... 65 1e-09
UniRef50_Q010S4 Cluster: rRNA processing protein Rrp5; n=2; Ostr... 61 2e-08
UniRef50_Q7SB69 Cluster: Putative uncharacterized protein NCU062... 60 5e-08
UniRef50_A6S458 Cluster: Putative uncharacterized protein; n=1; ... 59 9e-08
UniRef50_Q0UD83 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_A2DQY1 Cluster: S1 RNA binding domain containing protei... 58 2e-07
UniRef50_Q05022 Cluster: rRNA biogenesis protein RRP5; n=6; Sacc... 44 6e-07
UniRef50_A7PW23 Cluster: Chromosome chr8 scaffold_34, whole geno... 55 2e-06
UniRef50_A5DPT1 Cluster: Putative uncharacterized protein; n=1; ... 53 5e-06
UniRef50_Q2UDF1 Cluster: RRNA processing protein Rrp5; n=11; Pez... 52 1e-05
UniRef50_Q5KH56 Cluster: RRNA processing-related protein, putati... 51 2e-05
UniRef50_UPI0000E4A233 Cluster: PREDICTED: similar to Programmed... 48 1e-04
UniRef50_Q9LHM6 Cluster: Pre-rRNA processing protein RRP5; n=6; ... 48 1e-04
UniRef50_A5DT96 Cluster: Putative uncharacterized protein; n=2; ... 41 0.020
UniRef50_Q23TZ6 Cluster: S1 RNA binding domain containing protei... 39 0.11
UniRef50_UPI000049887B Cluster: conserved hypothetical protein; ... 36 0.57
UniRef50_A7AQQ0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.76
UniRef50_Q5CW10 Cluster: RRP5 like protein involved in rRNA biog... 36 1.0
UniRef50_A5I5D5 Cluster: Putative uncharacterized protein; n=3; ... 33 5.3
UniRef50_Q4FLB1 Cluster: Sarcosine dehydrogenase; n=3; Bacteria|... 33 7.1
>UniRef50_Q4S7N9 Cluster: Chromosome 18 SCAF14712, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 18 SCAF14712, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 2384
Score = 85.0 bits (201), Expect = 1e-15
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Frame = +2
Query: 206 KSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKT-EKVRE 382
+++R G+ LLG V V+D ++ VS+PC L G + +I ESY K+L ++ E++
Sbjct: 2 QNVREGMLLLGAVKEVADFEVTVSLPCGLQGYLSIKNICESYTKVLSKQLDSSDIEEIYS 61
Query: 383 LSQMFKPGQYIAVSVVELAP---GNT--MLTTMPQHVNSGKRHTDIXKGAIFQAXVSSXE 547
L +F PG + V +L GN L+ P+ VN + + G + V S E
Sbjct: 62 LPHLFCPGMVLRCLVAKLDTSKGGNLSIQLSINPKLVNKALTTSSLKAGMVLSGCVDSVE 121
Query: 548 XHGYVMDLGIPNTTAFLPXKD 610
HGY++D+GI T AFLP K+
Sbjct: 122 DHGYIVDIGIKGTNAFLPRKE 142
>UniRef50_A0JMT9 Cluster: LOC779090 protein; n=6; Tetrapoda|Rep:
LOC779090 protein - Xenopus laevis (African clawed frog)
Length = 1427
Score = 81.8 bits (193), Expect = 1e-14
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Frame = +2
Query: 212 LRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVE--DKTEKVREL 385
L G+ LG V D ++ VS+P L G + A +I ++Y L+ VE D E + L
Sbjct: 76 LSVGMLFLGCVKRTKDFELTVSLPYCLTGYIQATNICDAYTNLISEQVEKDDPLEALVPL 135
Query: 386 SQMFKPGQYI--AVSVVEL-APG--NTMLTTMPQHVNSGKRHTDIXKGAIFQAXVSSXEX 550
S+++ PG + A+S +E A G + L+ P+HVN I G + VSS E
Sbjct: 136 SELYSPGMLVRCAISSLETTASGFPSVKLSVNPKHVNKALNTGSIKTGMVLSGCVSSVED 195
Query: 551 HGYVMDLGIPNTTAFLPXKDA 613
HGY++D+G+ T AFLP + A
Sbjct: 196 HGYLVDIGVAGTKAFLPRQKA 216
>UniRef50_UPI00015B5DEE Cluster: PREDICTED: similar to programmed
cell death protein 11 (pre-rrna processing protein
rrp5); n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to programmed cell death protein 11 (pre-rrna processing
protein rrp5) - Nasonia vitripennis
Length = 1662
Score = 77.0 bits (181), Expect = 3e-13
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 4/206 (1%)
Frame = +2
Query: 5 SFPRGGKQPPGAHFKQPGNFLGVAXXXXXXXXXXXXXSEGDDGYLSDEAQDYLKTHKLNN 184
SFPRGGK+P +P N L ++ + +D+ L + N
Sbjct: 271 SFPRGGKKP----VIKPSNNLFSKRTKIKAKKPRSKPNKTKEVASTDDGP--LVANTAQN 324
Query: 185 NLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYV--E 358
L SL G+ ++GR+ V+D VS+P ++ + A IS+SY L++ E
Sbjct: 325 ----LRLSSLHEGMVIVGRIFRVTDYHAFVSLPGQISAKLQATDISDSYTNSLKSIAKNE 380
Query: 359 DKTEKVRELSQMFKPGQYIAVSVVELAPGNTMLTTM--PQHVNSGKRHTDIXKGAIFQAX 532
+ +E+ + +S ++K G Y+ V P ++ PQ +N + K +
Sbjct: 381 EISEEFKPMSDLYKEGDYVVCYVKSFNPNTKKVSVSLEPQLINQSLNPGTLVKRSKVVLS 440
Query: 533 VSSXEXHGYVMDLGIPNTTAFLPXKD 610
+SS E HGYV++ G+ N AFL KD
Sbjct: 441 ISSVEDHGYVLETGLKNFRAFLSIKD 466
>UniRef50_UPI0000F2B0DB Cluster: PREDICTED: similar to KIAA0185;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
KIAA0185 - Monodelphis domestica
Length = 1773
Score = 76.6 bits (180), Expect = 4e-13
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 7/142 (4%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYV--EDKTE 370
LS + L G+ LLG V V+++++ +S+P L G V A +I ++Y K L V E+ E
Sbjct: 75 LSIEVLSEGMRLLGCVKEVNNLELVISLPNDLWGYVQATNICDAYTKKLNEQVDREEPLE 134
Query: 371 KVRELSQMFKPGQYIAVSVVELAPGNTM-----LTTMPQHVNSGKRHTDIXKGAIFQAXV 535
+ LS++F+PG + +V L + L+ P+ VN + G + V
Sbjct: 135 DLAPLSKLFQPGMLVRCAVSSLKSTSKKNKSIKLSLNPKDVNGVLSPAALKPGMLLTGTV 194
Query: 536 SSXEXHGYVMDLGIPNTTAFLP 601
S E HGY++D+G+ T AFLP
Sbjct: 195 DSVEDHGYLVDIGVGGTKAFLP 216
>UniRef50_UPI0000E22681 Cluster: PREDICTED: programmed cell death
11; n=1; Pan troglodytes|Rep: PREDICTED: programmed cell
death 11 - Pan troglodytes
Length = 1491
Score = 74.1 bits (174), Expect = 2e-12
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 13/212 (6%)
Frame = +2
Query: 5 SFPRGGKQP---PGAHFKQP---GNFLGVAXXXXXXXXXXXXXSEGDDGYLSDEAQDYLK 166
SFPRGG + P F+Q N ++ L E ++ K
Sbjct: 7 SFPRGGTRKIHKPEKAFQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKIEKRESSK 66
Query: 167 THKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLE 346
+ + LS +SL G+ +LG V V+++++ +S+P L G V I ++Y K L
Sbjct: 67 SAR--EKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYTKKLN 124
Query: 347 AYV--EDKTEKVRELSQMFKPGQYI-----AVSVVELAPGNTMLTTMPQHVNSGKRHTDI 505
V E + + L ++F PG + ++ + + + L+ P++VN +
Sbjct: 125 EQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNRVLSAEAL 184
Query: 506 XKGAIFQAXVSSXEXHGYVMDLGIPNTTAFLP 601
G + VSS E HGY++D+G+ T AFLP
Sbjct: 185 KPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP 216
Score = 33.9 bits (74), Expect = 3.1
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +2
Query: 212 LRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEKVREL 385
L G +GRV+ V+ + + VS P +G V H+S+SY++ LE +V K + L
Sbjct: 1335 LEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYIL 1394
Query: 386 SQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTDIXKGAIFQAXVSSXEXHGYVM 565
S +++ P P+ +NS + DI +G + + V S + HG
Sbjct: 1395 STADNV-LTLSLRSSRTNPETKSKVEDPE-INSIQ---DIKEGQLLRGYVGSIQPHGVFF 1449
Query: 566 DLG 574
LG
Sbjct: 1450 RLG 1452
>UniRef50_Q14690 Cluster: RRP5 protein homolog; n=32; Amniota|Rep:
RRP5 protein homolog - Homo sapiens (Human)
Length = 1871
Score = 74.1 bits (174), Expect = 2e-12
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 13/212 (6%)
Frame = +2
Query: 5 SFPRGGKQP---PGAHFKQP---GNFLGVAXXXXXXXXXXXXXSEGDDGYLSDEAQDYLK 166
SFPRGG + P F+Q N ++ L E ++ K
Sbjct: 7 SFPRGGTRKIHKPEKAFQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKIEKRESSK 66
Query: 167 THKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLE 346
+ + LS +SL G+ +LG V V+++++ +S+P L G V I ++Y K L
Sbjct: 67 SAR--EKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYTKKLN 124
Query: 347 AYV--EDKTEKVRELSQMFKPGQYI-----AVSVVELAPGNTMLTTMPQHVNSGKRHTDI 505
V E + + L ++F PG + ++ + + + L+ P++VN +
Sbjct: 125 EQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNRVLSAEAL 184
Query: 506 XKGAIFQAXVSSXEXHGYVMDLGIPNTTAFLP 601
G + VSS E HGY++D+G+ T AFLP
Sbjct: 185 KPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP 216
Score = 33.9 bits (74), Expect = 3.1
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +2
Query: 212 LRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEKVREL 385
L G +GRV+ V+ + + VS P +G V H+S+SY++ LE +V K + L
Sbjct: 1227 LEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYIL 1286
Query: 386 SQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTDIXKGAIFQAXVSSXEXHGYVM 565
S +++ P P+ +NS + DI +G + + V S + HG
Sbjct: 1287 STADNV-LTLSLRSSRTNPETKSKVEDPE-INSIQ---DIKEGQLLRGYVGSIQPHGVFF 1341
Query: 566 DLG 574
LG
Sbjct: 1342 RLG 1344
>UniRef50_Q1ED11 Cluster: Pdcd11 protein; n=6; Danio rerio|Rep:
Pdcd11 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 1431
Score = 73.3 bits (172), Expect = 4e-12
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVE--DKTE 370
L + L G +LG V VSD ++ V +P L+G + C+I ++Y +L ++ D E
Sbjct: 70 LHLRDLTVGTLMLGCVKEVSDFEVVVGLPSGLVGYLPICNICDAYTNILNDKLDTDDGLE 129
Query: 371 KVRELSQMFKPGQYIAVSVVELAPG-----NTMLTTMPQHVNSGKRHTDIXKGAIFQAXV 535
+V LS++F PG I V L + L+ P+ VN + V
Sbjct: 130 EVVPLSKLFTPGMLIRCVVSSLDSAKEGHISLKLSINPKDVNKALNSVALKPAMTLSGCV 189
Query: 536 SSXEXHGYVMDLGIPNTTAFLPXK 607
S E HGY++D+GI T AFLP K
Sbjct: 190 ESVEDHGYLVDIGIGGTKAFLPKK 213
>UniRef50_Q7PQF3 Cluster: ENSANGP00000011318; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000011318 - Anopheles gambiae
str. PEST
Length = 1382
Score = 72.9 bits (171), Expect = 5e-12
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Frame = +2
Query: 182 NNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVED 361
+NL+F +R G+ LLG V + ++ +S+P +L G V +ISE+Y+K LE
Sbjct: 35 SNLVF---GKVRAGMLLLGCVKQIRATELLISLPGRLNGIVQITNISEAYSKRLEHMYNT 91
Query: 362 KTEKVRELSQMFKPGQYIAVSVVELAPGNTM--LTTMPQHVNSGKRHTDIXKGAIFQAXV 535
++ L ++ G + + V+ LT P ++S + + +G + A +
Sbjct: 92 RSTDCPTLGDLYTVGDLVYMKVLRKVKDRRQVYLTLDPSKLHSDFKPAQLVEGLVLAATI 151
Query: 536 SSXEXHGYVMDLGIPNTTAFLP 601
+ E HGY MD+G+ N AFLP
Sbjct: 152 TVKEDHGYTMDIGVHNVRAFLP 173
>UniRef50_O74835 Cluster: U3 snoRNP-associated protein Rrp5; n=1;
Schizosaccharomyces pombe|Rep: U3 snoRNP-associated
protein Rrp5 - Schizosaccharomyces pombe (Fission yeast)
Length = 1690
Score = 72.1 bits (169), Expect = 9e-12
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 20/157 (12%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAY-------- 352
L K++ PG +LG++ ++ + + VS+P L G V +IS+ + L++
Sbjct: 101 LRYKNITPGSLILGQIAQINTLDLAVSLPNCLTGYVPITNISDKLSDRLDSIDNHAEDNA 160
Query: 353 ---VEDKTEKVRELSQMFKPGQYIAVSVVELAPGNTM--------LTTMPQHVN-SGKRH 496
ED ++ +L ++K GQ++ VSV L NT L+ PQ N S
Sbjct: 161 ATEEEDGLNQIPDLMDLYKVGQWVRVSVTALGSENTTKTGKRHIELSLKPQDANGSAPEA 220
Query: 497 TDIXKGAIFQAXVSSXEXHGYVMDLGIPNTTAFLPXK 607
D G++ QA VSS E HG V D+GI N T FL K
Sbjct: 221 ADFVAGSMIQAVVSSIEDHGIVFDIGINNYTGFLSKK 257
>UniRef50_Q0IED9 Cluster: Programmed cell death protein 11; n=1;
Aedes aegypti|Rep: Programmed cell death protein 11 -
Aedes aegypti (Yellowfever mosquito)
Length = 1542
Score = 70.9 bits (166), Expect = 2e-11
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKT--- 367
L ++ + G+ L+G V ++ + IKVS+P +L G V ISE+YN L + V+
Sbjct: 74 LQFRTAQEGMLLMGCVYKITKMDIKVSLPGRLYGTVPIMAISEAYNNRLHSLVQKSLGGP 133
Query: 368 -EKVRELSQMFKPGQ--YIAVSVVELAPGNTMLTTMPQHVNSGKRHTDIXKGAIFQAXVS 538
E+ L +++ G Y+ + + LT PQ ++S + +G + A V
Sbjct: 134 EEQCPGLEELYHEGDLVYVKIKSKHSEKNHFGLTLDPQDLHSELTCKHLVEGLVLSATVE 193
Query: 539 SXEXHGYVMDLGIPNTTAFLP 601
E HGY M++GI N AFLP
Sbjct: 194 EEEDHGYQMNVGIRNVRAFLP 214
>UniRef50_A7SBJ3 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1771
Score = 68.9 bits (161), Expect = 9e-11
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Frame = +2
Query: 182 NNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVED 361
N++ LS K L G+ LLG V V + ++ +S+P L G V HI + KL+ A +
Sbjct: 102 NHVASLSFKKLCEGMKLLGAVKEVGEFELIISLPNGLSGFV---HILDINEKLMSALAKS 158
Query: 362 KTEK-----VRELSQMFKPGQYIAVSVVELAPGN-----TMLTTMPQHVNSGKRHTDIXK 511
TE+ + L +F + V EL L+ P+ VN+G T+I
Sbjct: 159 STEERIEDSIPSLGDLFTVNSLVVCVVKELLSSKHGHRKVKLSLRPEDVNAGV--TNIVP 216
Query: 512 GAIFQAXVSSXEXHGYVMDLGIPNTTAFLPXK 607
G + VSS E HGYV+ GIP T FL K
Sbjct: 217 GFVLPGCVSSVEDHGYVLSFGIPGKTGFLSKK 248
>UniRef50_Q9VC94 Cluster: CG5728-PA; n=2; Sophophora|Rep: CG5728-PA
- Drosophila melanogaster (Fruit fly)
Length = 1430
Score = 67.7 bits (158), Expect = 2e-10
Identities = 34/140 (24%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKV 376
L+ +L+ + ++G V ++ +++++P ++ + IS++Y ++ +A + T +
Sbjct: 66 LNMDTLQEDMLVMGVVKELTATALQIALPGRMFARTLVADISDAYTRVAKAAMSGDTSEY 125
Query: 377 RELSQMFKPGQYI---AVSVVELAPGNT--MLTTMPQHVNSGKRHTDIXKGAIFQAXVSS 541
+L+++F+ G+ + A+ +L G +L+ P V+ H I KG IF V+
Sbjct: 126 HDLTELFQLGRIVYGKAIKTEKLDTGRVSLLLSLKPADVHGNLHHKSIKKGFIFSGAVAE 185
Query: 542 XEXHGYVMDLGIPNTTAFLP 601
HGYV++ G+ AF+P
Sbjct: 186 ALEHGYVIESGVQGLQAFVP 205
>UniRef50_A4QSV3 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1808
Score = 65.7 bits (153), Expect = 8e-10
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 15/145 (10%)
Frame = +2
Query: 221 GINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYV-----EDKTEKVREL 385
G +LG++ +S +++++S+P + G+V A IS K L+ + E+ + +L
Sbjct: 165 GSLVLGQISAISALEVEISLPNNVTGHVKATSISTQLTKKLQDAMDVDQEEEDDDSEIDL 224
Query: 386 SQMFKPGQYIAVSVVEL--------APGNTM--LTTMPQHVNSGKRHTDIXKGAIFQAXV 535
+ + GQY+ VV A G L+ P+ N+G D+ + + +
Sbjct: 225 TSILSVGQYVRAYVVSTMEEPSTAGAKGKRRIELSLQPELANTGLSSADVVENSTVAGSI 284
Query: 536 SSXEXHGYVMDLGIPNTTAFLPXKD 610
SS E HGYV+DLGI N T FL K+
Sbjct: 285 SSVEDHGYVVDLGIQNLTGFLSKKE 309
>UniRef50_Q6C430 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 1567
Score = 65.3 bits (152), Expect = 1e-09
Identities = 43/138 (31%), Positives = 66/138 (47%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKV 376
LS ++ G +LGR++++ VS+P L G V +SE+ N A +E+ E
Sbjct: 86 LSLDNISVGSIILGRIVNIQSTACVVSLPNNLHGFVSCVQVSEALN----AKIEEGEEF- 140
Query: 377 RELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTDIXKGAIFQAXVSSXEXHG 556
+LS K GQ++ SVV+ + L+ +P+ VN +DI Q V S E G
Sbjct: 141 -DLSDYVKEGQWVRASVVDTSNKRLGLSLLPKDVNRDIEDSDIDANMALQVEVKSKEDKG 199
Query: 557 YVMDLGIPNTTAFLPXKD 610
YV+ GI F+ D
Sbjct: 200 YVVATGIKGKKGFIKDTD 217
>UniRef50_Q010S4 Cluster: rRNA processing protein Rrp5; n=2;
Ostreococcus|Rep: rRNA processing protein Rrp5 -
Ostreococcus tauri
Length = 1947
Score = 61.3 bits (142), Expect = 2e-08
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAY----VEDK 364
L KSLR G+ LLG V V+ + +S+P L G V S+ + + +D+
Sbjct: 109 LKYKSLRSGVKLLGVVSEVTARGLVMSLPDGLRGTVARAEASDVFRGATRSAGAESADDE 168
Query: 365 TEKVRE----------LSQMFKPGQYIAVSVVELAPGNT-----MLTTMPQHVNSGKRHT 499
+E + L +++PGQ + V+ L G T L+ ++V +G
Sbjct: 169 SESSDDEFEGEEETISLESLYEPGQVLRCVVLSLDKGKTGGKRIELSLRLENVCAGIGKD 228
Query: 500 DIXKGAIFQAXVSSXEXHGYVMDLGIPNTTAFLPXK 607
+ +G++ A V S E HGY++D GI T+ FLP K
Sbjct: 229 SLVEGSVAPAMVKSIEDHGYILDFGIAGTSGFLPKK 264
>UniRef50_Q7SB69 Cluster: Putative uncharacterized protein
NCU06272.1; n=2; Sordariales|Rep: Putative
uncharacterized protein NCU06272.1 - Neurospora crassa
Length = 1779
Score = 59.7 bits (138), Expect = 5e-08
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYV------- 355
L+ K L G +LG V ++ + I V++P ++G+V IS K LEA
Sbjct: 150 LNFKRLVKGSLVLGSVCAINSLDIAVALPNNIIGHVPITAISAPLTKRLEASAGNDNAEE 209
Query: 356 -EDKTEKVRELSQMFKPGQYI---AVSVVELA----PGNTM----LTTMPQHVNSGKRHT 499
ED+ + +L +F+ GQY+ VS V+ A PG L+ P N+G
Sbjct: 210 SEDENDNDVDLESLFQIGQYVRAYVVSTVDEASTHTPGKAKRHIELSLQPSLANTGMAEQ 269
Query: 500 DIXKGAIFQAXVSSXEXHGYVMDLGIPNT 586
D+ + A ++S E HGYVMD+ I ++
Sbjct: 270 DVVVNSTVMAAIASVEDHGYVMDIEIADS 298
>UniRef50_A6S458 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1678
Score = 58.8 bits (136), Expect = 9e-08
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 21/159 (13%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYV----EDK 364
LS K L G +LG+V ++ I +S+P L G V IS+ + +EA +D
Sbjct: 143 LSYKRLVSGSLVLGQVSQINATDIALSLPNNLTGYVPITAISDKVTERVEAIAAAEEDDA 202
Query: 365 TEKVR----ELSQMFKPGQYIAVSVVELAPG-NTM----------LTTMPQHVNSGKRHT 499
++V +L +MF GQY+ VV + NT L+ PQH N+G
Sbjct: 203 DDEVEVEDIDLKKMFSLGQYLRAYVVSTSDDTNTATLGKGKRRIELSLRPQHANNGVTPQ 262
Query: 500 DIXKGAIFQAXVSSXEXHGYVMDLGIPNT--TAFLPXKD 610
++ A V+S E HG +M++G+ +T F+ KD
Sbjct: 263 NLINNTTLMASVTSVEDHGLIMNIGLEDTGIRGFMGAKD 301
>UniRef50_Q0UD83 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1794
Score = 58.4 bits (135), Expect = 1e-07
Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYV------- 355
L+ K L PG +LG+V VS I +++P L+G V +S+ N+ LE +
Sbjct: 143 LNYKKLTPGTIILGQVTDVSHQDIVLALPNNLVGYVPLTAVSDKLNERLEKLLKEEEDGA 202
Query: 356 ---EDKTEKVRE--LSQMFKPGQYIAVSVVELAPGNTM------LTTMPQHVNSGKRHTD 502
ED+ E + L MF GQY+ V + L+ P+ VN G
Sbjct: 203 DIAEDEDESFEDVHLEDMFTIGQYMRACVTATTDDSARARKRLELSIEPKLVNKGLSKRK 262
Query: 503 IXKGAIFQAXVSSXEXHGYVMDLGIPNT--TAFLP 601
+ ++ QA V S E HG VMDLG+ ++ FLP
Sbjct: 263 MPINSMVQASVVSNEDHGLVMDLGLDDSKIKGFLP 297
>UniRef50_A2DQY1 Cluster: S1 RNA binding domain containing protein;
n=1; Trichomonas vaginalis G3|Rep: S1 RNA binding domain
containing protein - Trichomonas vaginalis G3
Length = 1601
Score = 57.6 bits (133), Expect = 2e-07
Identities = 36/127 (28%), Positives = 60/127 (47%)
Frame = +2
Query: 221 GINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKVRELSQMFK 400
G L ++ D I + +P G + I++ + + L+ +++ E++ EL F
Sbjct: 56 GCITLASILSFQDDMIFLELPGNARGTLQLTEINDPFLQRLQHAIKND-EELPELENFFN 114
Query: 401 PGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTDIXKGAIFQAXVSSXEXHGYVMDLGIP 580
G ++ +V+ L+ P VNS + +G IF V S E GY++DLG
Sbjct: 115 IGDFLMATVISAGTHPVELSIRPNLVNS---MIEPEEGRIFWGAVKSKEDRGYIIDLGKE 171
Query: 581 NTTAFLP 601
N TAFLP
Sbjct: 172 NVTAFLP 178
>UniRef50_Q05022 Cluster: rRNA biogenesis protein RRP5; n=6;
Saccharomycetales|Rep: rRNA biogenesis protein RRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1729
Score = 43.6 bits (98), Expect(2) = 6e-07
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Frame = +2
Query: 359 DKTEKVRELSQMFKPGQYIAVSVVE---LAPGNTM-------LTTMPQHVNSGKRHTDIX 508
DK+ ++ L + F GQ++ SV++ L P LT P VN D+
Sbjct: 196 DKSNELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEPSSVNI-YADEDLV 254
Query: 509 KGAIFQAXVSSXEXHGYVMDLGIPNTTAFLPXKD 610
K Q V S E HG +D+G+P T F+ KD
Sbjct: 255 KSTSIQCAVKSIEDHGATLDVGLPGFTGFIAKKD 288
Score = 32.3 bits (70), Expect(2) = 6e-07
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 206 KSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVED 361
K+L+ G +LLG++ ++ + ++ + G V HISE + +LE ED
Sbjct: 114 KTLKNGSSLLGQISAITKQDLCITFTDGISGYVNLTHISEEFTSILEDLDED 165
>UniRef50_A7PW23 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1799
Score = 54.8 bits (126), Expect = 2e-06
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKV 376
++ K++ PG+ L G V V++ + +S+P L G V A SE+++ L ++D E +
Sbjct: 26 ITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRA---SEAFDPLFSNEIKD-AEGI 81
Query: 377 RELSQMFKPGQYIAVSVVEL-------APGNTMLTTMPQHVNSGKRHTDIXKGAIFQAXV 535
L ++F GQ ++ V++L L+ ++ G + +G + A V
Sbjct: 82 F-LPRIFHIGQLVSCVVLQLDDDKKEKGKRRIWLSLRLSLLHKGFTLDALQEGMVLTAYV 140
Query: 536 SSXEXHGYVMDLGIPNTTAFLP 601
S E HGY++ G+P+ T FLP
Sbjct: 141 KSIEDHGYILHFGLPSFTGFLP 162
>UniRef50_A5DPT1 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1674
Score = 53.2 bits (122), Expect = 5e-06
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVED----- 361
LS K L PG +LG++ V+ + +++++ L+G V IS+ + +E Y ++
Sbjct: 86 LSFKKLFPGTTVLGQISKVNKLDLEIAIGDNLIGYVPISSISDEITRKVELYQQESDSSE 145
Query: 362 -------------KTEKVRELSQMFKPGQYIAVSVVELAPGNT-----MLTTMPQHVNSG 487
K ++ +L +FK G+++ V E + T P++VN
Sbjct: 146 DEEEEGVTRTATMKDNELPDLQSIFKAGEWLRAKVTEAELSQSKKKRIQFTIEPENVNES 205
Query: 488 KRHTDIXKGAIFQAXVSSXEXHGYVMDLGIPNTTAFLPXKD 610
D+ G + Q V S E G +++ G+ + F+ K+
Sbjct: 206 IEDEDLIPGNLLQCSVVSVEDRGVILNTGVSGKSGFISNKE 246
>UniRef50_Q2UDF1 Cluster: RRNA processing protein Rrp5; n=11;
Pezizomycotina|Rep: RRNA processing protein Rrp5 -
Aspergillus oryzae
Length = 1827
Score = 52.0 bits (119), Expect = 1e-05
Identities = 51/168 (30%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Frame = +2
Query: 140 SDEAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHI 319
+DEAQD K + L+ K + PG +LG+V +S I +S+P L G V +
Sbjct: 141 ADEAQD-----KQGVRIEGLNFKRVVPGTMVLGQVSSISAHDIGLSLPNNLTGYVPLTAV 195
Query: 320 SESYNKLLEAYV------------EDKTEKVRELSQMFKPGQYIAVSVVELAPG------ 445
S+ + +E + +D E +LS F GQY+ VV +
Sbjct: 196 SKRLEEKIENLLNEDENAEEDDDDDDDDEDSIDLSDYFYLGQYLRAYVVSVGNNAADASS 255
Query: 446 ----NTMLTTMPQHVNSGKRHTDIXKGAIFQAXVSSXEXHGYVMDLGI 577
LT P+ N G +D+ QA V S E HG VMDLGI
Sbjct: 256 KSRKRIELTVDPRQANFGLLKSDLVDNTAVQASVVSVEDHGLVMDLGI 303
>UniRef50_Q5KH56 Cluster: RRNA processing-related protein, putative;
n=2; Filobasidiella neoformans|Rep: RRNA
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1484
Score = 51.2 bits (117), Expect = 2e-05
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Frame = +2
Query: 140 SDEAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHI 319
+++A+ + K N + L+ K L PG ++L RV + + + +S+P LL +V I
Sbjct: 97 NEDAKKKEERDKDNIRVEILNYKRLVPGTHVLARVHTILPLHLILSLPNNLLAHVPITEI 156
Query: 320 SESYNKLL---EAYVEDKTEK-------VRELSQMFKPGQYIAVSVVELAP--------- 442
S + +LL EA D+ E+ +L+Q+F PGQY+ V+ L P
Sbjct: 157 SNTLTQLLTAEEAMAVDEGEEESDDESSAPDLAQLFVPGQYVHAKVLTLYPTASQSFISQ 216
Query: 443 ----------GNTMLTTMPQHVNSGKRHTDIXKGAIFQAXVSSXEXHGYVMDLGI 577
LT +P+ VNS D+ G V S E G+++ +G+
Sbjct: 217 YPITETTKLASRVELTLIPEKVNSEVAKKDLETGYFLVGEVKSEEDKGWIVGVGL 271
>UniRef50_UPI0000E4A233 Cluster: PREDICTED: similar to Programmed
cell death protein 11, partial; n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Programmed cell
death protein 11, partial - Strongylocentrotus
purpuratus
Length = 527
Score = 48.4 bits (110), Expect = 1e-04
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKV 376
L+SK+L G+ +L V + + +I +S+P V +S + + L+ E +
Sbjct: 87 LTSKTLSEGMLVLAVVQEIHEYEIVLSLPNGQTAFVQITDVSSFFTQQLQELNESNGAED 146
Query: 377 REL---SQMFKPGQYIAVSVVELAP---GNTMLTTMPQH--VNSGKRHTDIXKGAIFQAX 532
++L +++ G + V L G+ + + VNS + I G
Sbjct: 147 QDLPNIQDVYQVGNLVPCKVKSLGASKDGHRRIQASLDYKEVNSELGISFIKAGMTLHGC 206
Query: 533 VSSXEXHGYVMDLGIPNTTAFLPXKDA 613
VSS E HGY +DLGI T AFL ++A
Sbjct: 207 VSSVEDHGYTIDLGIRGTNAFLAKEEA 233
>UniRef50_Q9LHM6 Cluster: Pre-rRNA processing protein RRP5; n=6;
Eukaryota|Rep: Pre-rRNA processing protein RRP5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1765
Score = 48.4 bits (110), Expect = 1e-04
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Frame = +2
Query: 224 INLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKVRELSQMFKP 403
+ LLG V V+ I +S+P L G V A +S+ ++ +E +D+ E L +F
Sbjct: 1 MKLLGVVTEVNQKDIVISLPGGLRGLVRASEVSDFTDRGIE---DDENEL---LGDIFSV 54
Query: 404 GQYIAVSVVEL-------APGNTMLTTMPQHVNSGKRHTDIXKGAIFQAXVSSXEXHGYV 562
GQ + V+EL L+ ++ G G +F A V S E HG +
Sbjct: 55 GQLVPCIVLELDDDKKEAGKRKIWLSLRLSLLHKGFSFDSFQLGMVFSANVKSIEDHGSI 114
Query: 563 MDLGIPNTTAFLPXKD 610
+ G+P+ T F+ D
Sbjct: 115 LHFGLPSITGFIEISD 130
>UniRef50_A5DT96 Cluster: Putative uncharacterized protein; n=2;
Saccharomycetales|Rep: Putative uncharacterized protein
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 1863
Score = 41.1 bits (92), Expect = 0.020
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +2
Query: 380 ELSQMFKPGQYIAVSVVELAPGNTM----LTTMPQHVNSGKRHTDIXKGAIFQAXVSSXE 547
+L MF+ G ++ VVE L+ P+ VN+ D+ G + V S E
Sbjct: 323 DLKSMFQVGSWLKAKVVESDNSQKKRRIELSLEPKLVNANIEDEDLIPGNVILCAVKSVE 382
Query: 548 XHGYVMDLGIPNTTAFLPXKD 610
HG ++D G +AF+ K+
Sbjct: 383 DHGVILDTGFEKFSAFMSNKE 403
>UniRef50_Q23TZ6 Cluster: S1 RNA binding domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: S1 RNA binding
domain containing protein - Tetrahymena thermophila
SB210
Length = 2060
Score = 38.7 bits (86), Expect = 0.11
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +2
Query: 317 ISESYNKLLEAYVEDKTEKVRELSQM--FKPGQYIAVSVV-ELAPGNTMLTTMPQHVNSG 487
++ S NK V D TE +E + + + G+Y+ +V + GN ++ VNSG
Sbjct: 172 VNLSRNKKAFVTVADATEASKEENDLRIYDQGEYLIGEIVPSIKEGNMNVSIKTSKVNSG 231
Query: 488 KRHTDIXKGAIFQAXVSSXEXHG 556
+ +DI I VSS E HG
Sbjct: 232 LQISDIHLNMILPGLVSSKEDHG 254
>UniRef50_UPI000049887B Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 784
Score = 36.3 bits (80), Expect = 0.57
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +2
Query: 200 SSKSLRPGINLL-GRVIHVSDVKIKVSMPC--KLLGNVMACHISESYNKLLEAYVEDKTE 370
+S++L P I++L R+ HV + V++ K+ G + E N L E Y+ E
Sbjct: 522 ASRALLPIISILVQRITHVFERLFNVALDVIEKVFGEKSSLQNGELSNALKEVYINFAKE 581
Query: 371 KVRELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGK 490
K+R +M K VSVV+ + ++ T M + + K
Sbjct: 582 KLRRCEKMLKDDLNSFVSVVDWSMLSSTTTVMEEENDDEK 621
>UniRef50_A7AQQ0 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 729
Score = 35.9 bits (79), Expect = 0.76
Identities = 32/144 (22%), Positives = 63/144 (43%)
Frame = +2
Query: 161 LKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKL 340
LK+ KL + L G LLG V ++ +++ +P L+G V A S+ +
Sbjct: 47 LKSGKLFQRGRLPTYDKLEAGSLLLGSVAVIAPSGLRIHLPGGLVGFVRA---SDGVD-- 101
Query: 341 LEAYVEDKTEKVRELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTDIXKGAI 520
+ + + + LS G + SV+E+ +L+ P +N G + G +
Sbjct: 102 IPESARQRPDTI--LSGCVSVGSRVVCSVLEVKRHFVLLSMRPSVINKGLSSGALTTGML 159
Query: 521 FQAXVSSXEXHGYVMDLGIPNTTA 592
A V + E HG ++ + ++++
Sbjct: 160 LPASVRAHEDHGIILGFHLGDSSS 183
>UniRef50_Q5CW10 Cluster: RRP5 like protein involved in rRNA
biogenesis with 7 S1 domains and 5 HAT repeats; n=4;
Cryptosporidium|Rep: RRP5 like protein involved in rRNA
biogenesis with 7 S1 domains and 5 HAT repeats -
Cryptosporidium parvum Iowa II
Length = 2002
Score = 35.5 bits (78), Expect = 1.0
Identities = 31/144 (21%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Frame = +2
Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEK 373
+ + L+ G L G + HVS+ ++ +S+P + + E + +E + E K
Sbjct: 42 IERRDLKLGTLLFGVIDHVSEKELIISLPGSNTAIISIENTLEDSRTIPIELFQE---LK 98
Query: 374 VRELSQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTD---IXKGAIFQAXVSSX 544
+ L F GQ++ +++ +T P +N+G G + A + S
Sbjct: 99 KKSLEDRFSVGQFVNGAIISNNKIKNNITLKPSILNAGLNSNSKCLNVFGYVISALIISK 158
Query: 545 EXHGYVMDLGIPNT-TAFLPXKDA 613
E HG+ + GI T F+ +++
Sbjct: 159 ENHGFNIYTGIQGVKTVFMKVEES 182
>UniRef50_A5I5D5 Cluster: Putative uncharacterized protein; n=3;
Clostridium botulinum A|Rep: Putative uncharacterized
protein - Clostridium botulinum A str. ATCC 3502
Length = 365
Score = 33.1 bits (72), Expect = 5.3
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 187 FNFPKF*ELKAWNKFTWQGDSCIRCQNKSIDALQT 291
F F KF +L WN F WQ +S IRC+ K I+ L T
Sbjct: 85 FQFFKFVDLY-WNMFKWQMNSYIRCE-KKIEMLAT 117
>UniRef50_Q4FLB1 Cluster: Sarcosine dehydrogenase; n=3; Bacteria|Rep:
Sarcosine dehydrogenase - Pelagibacter ubique
Length = 814
Score = 32.7 bits (71), Expect = 7.1
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = +2
Query: 125 DDGYLSDEAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNV 304
+ ++ E+ +K KLN I LS K +PG LL +H + ++ K++G
Sbjct: 704 ETNFIGKESLLKIKDQKLNRRFIILSLKDSKPGTPLL---LHEEPIYLE----DKIIGRT 756
Query: 305 MACHISESYNKLLE-AYVED--KTEKVRELSQMFKPGQYIAVSVVELAP 442
+ + S +Y K L YV E++ +++ + + ++VE+AP
Sbjct: 757 TSGNYSFNYKKNLSFGYVSSIHSNEELSKMNLYIEVAKQKLPALVEIAP 805
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,826,959
Number of Sequences: 1657284
Number of extensions: 10077306
Number of successful extensions: 24038
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 23370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24012
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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