Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A16
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061461-1|AAL29009.1| 1430|Drosophila melanogaster LD41803p pro...    67   2e-11
AE014297-3525|AAF56280.2| 1430|Drosophila melanogaster CG5728-PA...    67   2e-11

>AY061461-1|AAL29009.1| 1430|Drosophila melanogaster LD41803p
           protein.
          Length = 1430

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 34/140 (24%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
 Frame = +2

Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKV 376
           L+  +L+  + ++G V  ++   +++++P ++    +   IS++Y ++ +A +   T + 
Sbjct: 66  LNMDTLQEDMLVMGVVKELTATALQIALPGRMFARTLVADISDAYTRVAKAAMSGDTSEY 125

Query: 377 RELSQMFKPGQYI---AVSVVELAPGNT--MLTTMPQHVNSGKRHTDIXKGAIFQAXVSS 541
            +L+++F+ G+ +   A+   +L  G    +L+  P  V+    H  I KG IF   V+ 
Sbjct: 126 HDLTELFQLGRIVYGKAIKTEKLDTGRVSLLLSLKPADVHGNLHHKSIKKGFIFSGAVAE 185

Query: 542 XEXHGYVMDLGIPNTTAFLP 601
              HGYV++ G+    AF+P
Sbjct: 186 ALEHGYVIESGVQGLQAFVP 205


>AE014297-3525|AAF56280.2| 1430|Drosophila melanogaster CG5728-PA
           protein.
          Length = 1430

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 34/140 (24%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
 Frame = +2

Query: 197 LSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISESYNKLLEAYVEDKTEKV 376
           L+  +L+  + ++G V  ++   +++++P ++    +   IS++Y ++ +A +   T + 
Sbjct: 66  LNMDTLQEDMLVMGVVKELTATALQIALPGRMFARTLVADISDAYTRVAKAAMSGDTSEY 125

Query: 377 RELSQMFKPGQYI---AVSVVELAPGNT--MLTTMPQHVNSGKRHTDIXKGAIFQAXVSS 541
            +L+++F+ G+ +   A+   +L  G    +L+  P  V+    H  I KG IF   V+ 
Sbjct: 126 HDLTELFQLGRIVYGKAIKTEKLDTGRVSLLLSLKPADVHGNLHHKSIKKGFIFSGAVAE 185

Query: 542 XEXHGYVMDLGIPNTTAFLP 601
              HGYV++ G+    AF+P
Sbjct: 186 ALEHGYVIESGVQGLQAFVP 205


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,474,114
Number of Sequences: 53049
Number of extensions: 488392
Number of successful extensions: 1067
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)