Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_A14
(710 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 33 0.053
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 32 0.070
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 30 0.38
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 30 0.38
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 29 0.50
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 29 0.66
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 28 1.1
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 1.1
SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 2.0
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 26 4.6
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 26 4.6
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 26 4.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 4.6
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 26 6.1
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 6.1
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 26 6.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 8.1
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 32.7 bits (71), Expect = 0.053
Identities = 32/170 (18%), Positives = 64/170 (37%), Gaps = 7/170 (4%)
Frame = +1
Query: 211 LQKXXQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXX 390
L+ + +EN+L+ E L + N E + ++ AE ALN +
Sbjct: 748 LESKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENIISDLKNK 807
Query: 391 XATATAKLSEASQAADESERARKVLENRSLADEERMDALE----NQLKEARFLAEEADKK 558
+ + +L E ++ + + L R A + + ++E NQ E + ++
Sbjct: 808 LSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSMESINKNQANELKLAKQKCSNL 867
Query: 559 YDEV--ARKLAMVEADLXXXXXXXXXXXXKIVE-LEEELRVVGNNLKSLE 699
+++ KLA + K L +EL+ V + SL+
Sbjct: 868 QEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELKTVKSENDSLK 917
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 32.3 bits (70), Expect = 0.070
Identities = 28/151 (18%), Positives = 58/151 (38%), Gaps = 4/151 (2%)
Frame = +1
Query: 154 QQAKXANLRAEXAEXXARQLQKXXQTIENELDQT----QESLMQVNGKLEEKEKALQNAE 321
QQ + E + Q +T+ENEL Q QE + Q + +E + + +
Sbjct: 419 QQLLATRGQLEQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQNDDLIESLKNQILTWK 478
Query: 322 SEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMD 501
++ AL + K S A +A D+ E+ + ++N++L + +
Sbjct: 479 NKYEALAKLYTQLRQEHLDLLSKYKQIQLKASSAQEAIDKKEKMEREMKNKNLELADMIL 538
Query: 502 ALENQLKEARFLAEEADKKYDEVARKLAMVE 594
+ E + K + R+L +++
Sbjct: 539 ERDRARHELETMHRSQRDKQESTERELRLLQ 569
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 29.9 bits (64), Expect = 0.38
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = -2
Query: 541 QRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRISRGP 365
+RG + R R +P P SR+PY R RR PR +R RSR SR P
Sbjct: 101 ERGGRVHGDSGRLRSRSPSPHEARSRSPYNDERSDRRSMSPR--YRSRSRSPDGRSRSP 157
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 29.9 bits (64), Expect = 0.38
Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Frame = +1
Query: 193 EXXARQLQKXXQTIENELDQTQESLMQ-------VNGKLEEKEKALQNAESEVAALNRRI 351
E RQLQ + ELD Q+ L + + ++EEKE + E+E + +
Sbjct: 284 EYEIRQLQNRLDELSEELDVAQDLLTEKEDEIATLKRQIEEKENSSSAFENEENSSYVHL 343
Query: 352 QXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEAR 531
Q A L+ + E++ + + L D ++ L+ QL +A
Sbjct: 344 QEDYAILQAKCDEFADRIQVLTADLEKEKENQIMHESEASIGLTDSMQVHTLQEQLHKAN 403
Query: 532 FLAEEADKKYDEVAR 576
EE + +D+++R
Sbjct: 404 ---EEIEFLHDQISR 415
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 29.5 bits (63), Expect = 0.50
Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 2/122 (1%)
Frame = +1
Query: 244 LDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLS-- 417
L +QE L+Q+N KLE+ + S L+++++ ++
Sbjct: 480 LSDSQEELLQLNAKLEKANIVIDELNSAKLKLSKQVEEESSMKDDLTEMNQRLKEQIESY 539
Query: 418 EASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 597
E ++ + R K E E+ + L QLK AR + + D + + ++
Sbjct: 540 ENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTARMKLADKYPQGDNTSENIDWLKH 599
Query: 598 DL 603
L
Sbjct: 600 SL 601
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 29.1 bits (62), Expect = 0.66
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Frame = +1
Query: 175 LRAEXAEXXARQLQKXXQTIENE---LDQTQESLMQVNG---KLEEKEKALQNAESEVAA 336
L ++ E A QL Q +NE LD +S +VN +L++ K + ++E+A
Sbjct: 201 LTSKIRELQASQLDHDLQASQNESAGLDVNAKSA-EVNAILSELDDANKIIVELQAEIAV 259
Query: 337 L--NRRIQXXXXXXXXXXXXXATATAKLSEASQA-ADESERARKVLENRSLADEERMDAL 507
L N + Q + ++ + E E ++ + L
Sbjct: 260 LKQNTKEQKSGSSQDDLSNQQKQQLDFMDSLNKKLSTELESIKEASRKEMETHCATIQTL 319
Query: 508 ENQLKEARFLAEE----ADK--KYDEVARKLAMVE 594
EN++KEAR + EE A+K YDE+ R+L++++
Sbjct: 320 ENEVKEARKVKEESLTLANKFSDYDEIKRELSVLK 354
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -3
Query: 660 LLKLNDFGFARLGTLLGALQVSLNHGQLTSNLIVFLVGLLSEEPGFLQLILEGVHALL 487
LL++ +F +RL G + +S L SN + LVG+L+++PG L + LL
Sbjct: 901 LLQMLEFLLSRLD---GTIDLSSEQHYLLSNFV--LVGMLNDDPGLSPKWLHAIKKLL 953
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.3 bits (60), Expect = 1.1
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Frame = +1
Query: 190 AEXXARQLQKXXQTIENELDQTQESLMQ----VNGKLEEKEKALQNAESEVAALNRRIQX 357
AE +Q+ E L+ E+ Q V ++ +E+ + + SE+ LN+R++
Sbjct: 962 AELEKSNIQQKYLASEKTLEMMNETHEQFKHLVESEISTREEKITSLRSELLDLNKRVEV 1021
Query: 358 XXXXXXXXXXXXATATAKLSEASQAADESERARKVLEN-RSLADEERMDALENQLKEARF 534
A +L +A + D + +K E RS AD + +L+ +++ R
Sbjct: 1022 LKEEKESSSKELA---KQLEDAVREKDSALSFKKDYEKIRSDADRV-ITSLKEDIEKERS 1077
Query: 535 LAEEADKKYD 564
L +E Y+
Sbjct: 1078 LMKECHSNYE 1087
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 409 KLSEASQAADESERARKVLENRSLADEE-RMDALENQLKEARFLAEEADKKYDEVARKLA 585
KL + + A S+ ++E S R++ L N+L+ + ++ +KK++E L
Sbjct: 642 KLLDMAPATPNSKLNTNLIEQTSYQRSLIRLEQLTNELESLKSISRNKEKKFEEAISSLQ 701
Query: 586 MVEADL 603
+ ++++
Sbjct: 702 LEKSNI 707
>SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 268
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 424 SQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYD 564
S +++ +R++L S + E D L + L+ RF+ ++A K Y+
Sbjct: 84 SLGSNQYSISRQLLRQPSFSSSENTDRLADLLRVRRFIYQKAWKSYE 130
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 26.2 bits (55), Expect = 4.6
Identities = 23/141 (16%), Positives = 55/141 (39%), Gaps = 10/141 (7%)
Frame = +1
Query: 178 RAEXAEXXARQLQKXXQTIENELDQTQESLMQVNGKLEEKEKALQN----------AESE 327
RAE AE ++++ E E + +LEE E+ + ++E
Sbjct: 21 RAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTE 80
Query: 328 VAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDAL 507
L+R+++ T K+ + A+ ER + LE E++++ +
Sbjct: 81 AEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLERERDDMEQKLEEM 140
Query: 508 ENQLKEARFLAEEADKKYDEV 570
++ + + +E + +++
Sbjct: 141 TDKYTKVKAELDEVHQALEDL 161
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 238 NELDQTQESLMQVNGK---LEEKEKALQNAESEVAALNRRIQ 354
N+L++ + + K L+EK K L+NA ++ L RRIQ
Sbjct: 60 NDLEEQRSGSIDSKDKEKPLDEKVKELENANKTLSDLVRRIQ 101
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 451 RARIHRRPGWPRTAWRWRSRDAPRISRGPPPAVGYVGSGQPLRTQ 317
RAR H RP R + R + + A G PP+ + SG R +
Sbjct: 81 RARQHERPFRSRKSRRRKGKKAFSPRPGSPPSPSFYRSGSQKRAR 125
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 4.6
Identities = 19/75 (25%), Positives = 26/75 (34%)
Frame = -2
Query: 523 PSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRISRGPPPAVGYV 344
P DS P + +AP + P P RD P R P G +
Sbjct: 479 PPKDSSSTSTQPTEQSNAQQAPSPKEEERPLPSEPSQNQPAEYRDTPDTPRNIMPLPGLM 538
Query: 343 GSGQPLRTQRSAEPS 299
+ QP++ EPS
Sbjct: 539 SADQPIKV---TEPS 550
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 6.1
Identities = 21/92 (22%), Positives = 37/92 (40%)
Frame = +1
Query: 418 EASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 597
+A++ + E+ ++ L R+ E +D+ E K A+ +KK+ E R A
Sbjct: 180 QAAELRSKDEQVKE-LNARNAKLLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAA 238
Query: 598 DLXXXXXXXXXXXXKIVELEEELRVVGNNLKS 693
L IV +EE + V K+
Sbjct: 239 QLQTIHEEYEQQQAHIVRMEELIHAVEKERKT 270
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 136 RAAMCXQQAKXANL--RAEXAEXXARQLQKXXQTIENELDQTQESLMQVNGKLEEKEKAL 309
R+++ + N+ + + + R+L+K + NE+ QESL + N L + +A+
Sbjct: 621 RSSILSHNSSAGNIDDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAI 680
Query: 310 Q 312
+
Sbjct: 681 R 681
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 601 SQPQPWPAYEQPHRISCRPPQRGTWLPSADS 509
S P P P QP ++S P LPSA S
Sbjct: 381 STPLPEPTPGQPRKVSGHNPPSARRLPSASS 411
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.4 bits (53), Expect = 8.1
Identities = 29/109 (26%), Positives = 37/109 (33%)
Frame = -2
Query: 610 RAPSQPQPWPAYEQPHRISCRPPQRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRR 431
R + P P P P PP LP G P AP P + AP + A +
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPM----GAPAAPPLPPSAPIAPPLPAGMPAA 466
Query: 430 PGWPRTAWRWRSRDAPRISRGPPPAVGYVGSGQPLRTQRSAEPSPSLRA 284
P P A AP + P PA + + A S+RA
Sbjct: 467 PPLPPAA------PAPPPAPAPAPAAPVASIAELPQQDGRANLMASIRA 509
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.307 0.119 0.295
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,079,268
Number of Sequences: 5004
Number of extensions: 35356
Number of successful extensions: 160
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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